Bhi03M000524 (mRNA) Wax gourd

NameBhi03M000524
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr3 : 13129689 .. 13131015 (-)
Sequence length1242
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGACGGGGATAAAGGGAAGCAGTGCGCGCGGAGGGCGAGAACGGGGAAGAGCAGGGGGGAAAGGAGGAGGTACGGAGGGGGAGGAGGATGGTGGAGGAGGTGGAGGAGAGGAGAGGGCGGAACCGCGGTGAGTCAGGGACGACGAGGGAGGGGAAAAGGGACGGAAAGCAGGGGAGGACTAGCAGATAAAAGGATGAGGGACGCGCTCGAAGACGACGAGGGGACCGGAAACCAAGAGGGGCCGACGACAGGAGCGGAAGCCGAACGCGGGGGCGACGAGGGGACCGAAAAGGGACGAGGGGCGACGAGAGGCACGGAGTCGCGGACGGGTGCCCGCACGAGGGTGGCGGAGCTCGCTCGGAGCTACCAGAGATAGGGGAGCGGGGGGTAAAAGCGCGGAGTAGAGGGCCAGCCAGAAAGGGAGAGAAGGAGAGGCAGGGCGCACTACGGAGGGGGGATGGGGAGAAAAGGGGCACAGCGCGCACCAGAGGACCCGCCGAACCGGGACGGGAAAGAGTGACGGCAGGAGACCAACCCGGGGGCGGGCACGGACGGCCGAGGGGGACCGGGGAACGACGCAACCCGGCAAGACAAGACAGAGTTAACGCAGGTACGGAAGACGGGGGACACGGACAGGGGGCCGGACCAGGGAGGAGACAGGGAGAGGACCACCTTAAGGAATGCCCCAGCAAGAAGACGAGGGCACTAGACAGACACAGGGTGACGAGCGGAAGACAGGGCGGCAAGGAGGCGGCCCGCAACCGGGGCGGGAGGGGCAGAAAAGAGAGAGCAGAAAAAGGCGGGGAACGGAGCGCGACCGGGAAAAAAAAAACAGGGGAAAGCGTGGAGCGAGAAAGCCCAGTTGGAGGGACGGAAGAAAACGGAAAACTCAGGCGGAAACGGGAAAGGCGGGAAAACAGTAAGACGGGAACGGAAAAACGACACCAAGAAAACGGGGAGAGAAAACCGTGGAAACCAGTGGATCGGCAACCGGAAGCGGAGGGGAGAAGGAACAGGGCACACGCGAAGTCCCAACGGCAAGCCAGGGCCAGGGCAGACCGTCGACGGCAACCGGGGGCCACAGGGAAACGTAGTGGCGAGAAGAGGGCCCGGACGGCGAGCGCGGGAAAGAGACGAGGACAGCGCAACAACAGGCCGGAAGACATAAACGGGGAGAACAACTGGGAGACAGCAAGAAGCAGCAGGACACGCGGGGGGGGCGGACAGGGTGACGGGCACAACCAGGAGGTGCAAGAGGGGCAGAGGAGGGGGCAGGGGGAGGGTGGAAGAGAGGGGGAAAAAAACGCCACGGGGGAAGAATAG

mRNA sequence

ATGGGGACGGGGATAAAGGGAAGCAGTGCGCGCGGAGGGCGAGAACGGGGAAGAGCAGGGGGGAAAGGAGGAGGTACGGAGGGGGAGGAGGATGGTGGAGGAGGTGGAGGAGAGGAGAGGGCGGAACCGCGACGACGAGGGGACCGGAAACCAAGAGGGGCCGACGACAGGAGCGGAAGCCGAACGCGGGGGCGACGAGGGGACCGAAAAGGGACGAGGGGCGACGAGAGGCACGGAGTCGCGGACGGGTGCCCGCACGAGGGTGGCGGAGCTCGCTCGGAGCTACCAGAGATAGGGGAGCGGGGGGTAAAAGCGCGGAGTAGAGGGCCAGCCAGAAAGGGAGAGAAGGAGAGGCAGGGCGCACTACGGAGGGGGGATGGGGAGAAAAGGGGCACAGCGCGCACCAGAGGACCCGCCGAACCGGGACGGGAAAGAGTGACGGCAGGAGACCAACCCGGGGGCGGGCACGGACGGCCGAGGGGGACCGGGGAACGACGCAACCCGGCAAGACAAGACAGAGTTAACGCAGGTACGGAAGACGGGGGACACGGACAGGGGGCCGGACCAGGGAGGAGACAGGGAGAGGACCACCTTAAGGAATGCCCCAGCAAGAAGACGAGGGCACTAGACAGACACAGGGTGACGAGCGGAAGACAGGGCGGCAAGGAGGCGGCCCGCAACCGGGGCGGGAGGGGCAGAAAAGAGAGAGCAGAAAAAGGCGGGGAACGGAGCGCGACCGGGAAAAAAAAAACAGGGGAAAGCGTGGAGCGAGAAAGCCCAGTTGGAGGGACGGAAGAAAACGGAAAACTCAGGCGGAAACGGGAAAGGCGGGAAAACAGTAAGACGGGAACGGAAAAACGACACCAAGAAAACGGGGAGAGAAAACCGTGGAAACCAGTGGATCGGCAACCGGAAGCGGAGGGGAGAAGGAACAGGGCACACGCGAAGTCCCAACGGCAAGCCAGGGCCAGGGCAGACCGTCGACGGCAACCGGGGGCCACAGGGAAACGTAGTGGCGAGAAGAGGGCCCGGACGGCGAGCGCGGGAAAGAGACGAGGACAGCGCAACAACAGGCCGGAAGACATAAACGGGGAGAACAACTGGGAGACAGCAAGAAGCAGCAGGACACGCGGGGGGGGCGGACAGGGTGACGGGCACAACCAGGAGGTGCAAGAGGGGCAGAGGAGGGGGCAGGGGGAGGGTGGAAGAGAGGGGGAAAAAAACGCCACGGGGGAAGAATAG

Coding sequence (CDS)

ATGGGGACGGGGATAAAGGGAAGCAGTGCGCGCGGAGGGCGAGAACGGGGAAGAGCAGGGGGGAAAGGAGGAGGTACGGAGGGGGAGGAGGATGGTGGAGGAGGTGGAGGAGAGGAGAGGGCGGAACCGCGACGACGAGGGGACCGGAAACCAAGAGGGGCCGACGACAGGAGCGGAAGCCGAACGCGGGGGCGACGAGGGGACCGAAAAGGGACGAGGGGCGACGAGAGGCACGGAGTCGCGGACGGGTGCCCGCACGAGGGTGGCGGAGCTCGCTCGGAGCTACCAGAGATAGGGGAGCGGGGGGTAAAAGCGCGGAGTAGAGGGCCAGCCAGAAAGGGAGAGAAGGAGAGGCAGGGCGCACTACGGAGGGGGGATGGGGAGAAAAGGGGCACAGCGCGCACCAGAGGACCCGCCGAACCGGGACGGGAAAGAGTGACGGCAGGAGACCAACCCGGGGGCGGGCACGGACGGCCGAGGGGGACCGGGGAACGACGCAACCCGGCAAGACAAGACAGAGTTAACGCAGGTACGGAAGACGGGGGACACGGACAGGGGGCCGGACCAGGGAGGAGACAGGGAGAGGACCACCTTAAGGAATGCCCCAGCAAGAAGACGAGGGCACTAGACAGACACAGGGTGACGAGCGGAAGACAGGGCGGCAAGGAGGCGGCCCGCAACCGGGGCGGGAGGGGCAGAAAAGAGAGAGCAGAAAAAGGCGGGGAACGGAGCGCGACCGGGAAAAAAAAAACAGGGGAAAGCGTGGAGCGAGAAAGCCCAGTTGGAGGGACGGAAGAAAACGGAAAACTCAGGCGGAAACGGGAAAGGCGGGAAAACAGTAAGACGGGAACGGAAAAACGACACCAAGAAAACGGGGAGAGAAAACCGTGGAAACCAGTGGATCGGCAACCGGAAGCGGAGGGGAGAAGGAACAGGGCACACGCGAAGTCCCAACGGCAAGCCAGGGCCAGGGCAGACCGTCGACGGCAACCGGGGGCCACAGGGAAACGTAGTGGCGAGAAGAGGGCCCGGACGGCGAGCGCGGGAAAGAGACGAGGACAGCGCAACAACAGGCCGGAAGACATAAACGGGGAGAACAACTGGGAGACAGCAAGAAGCAGCAGGACACGCGGGGGGGGCGGACAGGGTGACGGGCACAACCAGGAGGTGCAAGAGGGGCAGAGGAGGGGGCAGGGGGAGGGTGGAAGAGAGGGGGAAAAAAACGCCACGGGGGAAGAATAG

Protein sequence

MGTGIKGSSARGGRERGRAGGKGGGTEGEEDGGGGGGEERAEPRRRGDRKPRGADDRSGSRTRGRRGDRKGTRGDERHGVADGCPHEGGGARSELPEIGERGVKARSRGPARKGEKERQGALRRGDGEKRGTARTRGPAEPGRERVTAGDQPGGGHGRPRGTGERRNPARQDRVNAGTEDGGHGQGAGPGRRQGEDHLKECPSKKTRALDRHRVTSGRQGGKEAARNRGGRGRKERAEKGGERSATGKKKTGESVERESPVGGTEENGKLRRKRERRENSKTGTEKRHQENGERKPWKPVDRQPEAEGRRNRAHAKSQRQARARADRRRQPGATGKRSGEKRARTASAGKRRGQRNNRPEDINGENNWETARSSRTRGGGGQGDGHNQEVQEGQRRGQGEGGREGEKNATGEE
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi03G000524Bhi03G000524gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi03M000524.exon2Bhi03M000524.exon2exon
Bhi03M000524.exon1Bhi03M000524.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi03M000524cds.Bhi03M000524CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi03M000524Bhi03M000524-proteinpolypeptide


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 389..413
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..413
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 360..381
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 324..359