Bhi02M000494 (mRNA) Wax gourd

Overview
NameBhi02M000494
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr2 : 12572541 .. 12572765 (-)
Sequence length225
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAACTTATACAATGGCAGAAAGAGAAATATGAATTGGAGCTCAAGAGGCGTCAGGAGGTCATCAAACAGATCTACCAAGTTAAGGGTTTAAAGGAAGACGATCAGTTGACCCTCATAGATCTGTTGGTGAATGATATTCAGCGAACAGAGGGTTTTTTAGCCATTCCACTACCATTAAGAAAAAGATATTGCATGCATTTGTTGGGCAAGAGTAACTAA

mRNA sequence

ATGGAGAAACTTATACAATGGCAGAAAGAGAAATATGAATTGGAGCTCAAGAGGCGTCAGGAGGTCATCAAACAGATCTACCAAGTTAAGGGTTTAAAGGAAGACGATCAGTTGACCCTCATAGATCTGTTGGTGAATGATATTCAGCGAACAGAGGGTTTTTTAGCCATTCCACTACCATTAAGAAAAAGATATTGCATGCATTTGTTGGGCAAGAGTAACTAA

Coding sequence (CDS)

ATGGAGAAACTTATACAATGGCAGAAAGAGAAATATGAATTGGAGCTCAAGAGGCGTCAGGAGGTCATCAAACAGATCTACCAAGTTAAGGGTTTAAAGGAAGACGATCAGTTGACCCTCATAGATCTGTTGGTGAATGATATTCAGCGAACAGAGGGTTTTTTAGCCATTCCACTACCATTAAGAAAAAGATATTGCATGCATTTGTTGGGCAAGAGTAACTAA

Protein sequence

MEKLIQWQKEKYELELKRRQEVIKQIYQVKGLKEDDQLTLIDLLVNDIQRTEGFLAIPLPLRKRYCMHLLGKSN
Homology
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BLAST of Bhi02M000494 vs. NCBI nr
Match: XP_022158565.1 (uncharacterized protein LOC111025018 [Momordica charantia])

HSP 1 Score: 55.5 bits (132), Expect = 9.2e-05
Identity = 25/73 (34.25%), Postives = 48/73 (65.75%), Query Frame = 0 

Query: 1   MEKLIQWQKEKYELELKRRQEVIKQIYQVKGLKEDDQLTLIDLLVNDIQRTEGFLAIPLP 60
           +EK+  W  +K E ++ RR+ V  Q+ Q+  L+ +D + L+ +L+ +++++  FL +P+ 
Sbjct: 145 LEKMATWPDKKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTNVKKSISFLEVPIE 204

Query: 61  LRKRYCMHLLGKS 74
            +K +CM LLGKS
Sbjct: 205 FKKMFCMQLLGKS 217

The following BLAST results are available for this feature:
BLAST of Bhi02M000494 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi02M000494 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi02M000494 vs. TrEMBL
Match NameE-valueIdentityDescription
BLAST of Bhi02M000494 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022158565.19.2e-0534.25uncharacterized protein LOC111025018 [Momordica charantia][more]
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi02G000494Bhi02G000494gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi02M000494cds.Bhi02M000494CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi02M000494.exon1Bhi02M000494.exon1exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi02M000494Bhi02M000494-proteinpolypeptide