|
Name | Bhi01M001174 |
Type | mRNA |
Organism | Benincasa hispida (Wax gourd) |
Description | Unknown protein |
Location | chr1 : 32104600 .. 32105487 (+) |
Sequence length | 756 |
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGTATCGATCAAGATCATTGCCCATGAAAGACCTAAGGTGATGAATTTCCTCGGACTCGACCAAATAAGGGTCGACTTGAGAAGACATTTAAAATCCAAGAATAGGGGGTGGGCGAATTAGATCCCCATGACCCCAAACCAGAAGAGCAAAAGGTTTTGAAGCTACGTGTTGAAGCAACAGACAAAGAAGAAAGTGAAAGGAACAAAGTAGAGTCAAAACAGGTTTGTTCCGTCGAAGCTGAGGTCGAGGCAGATCCTTGGAGTTTTAAGAGGGGAGAACTCAAATAAAAAGGGATTCTAGATAAGAAGTTTGACGTCGAGGCTGAGGCTAACCCTTGGAGTTTTGAGAGGGGAGAACCCAGACAACAAAGAATTCTAAATTCTTCTAGAGAAAGGAGAGACAACCAACTTCCTAGTCGAGAGAACAAGGTCAAGGCTAATGCCAAGGCCAACCCTTGGAGTTTTAAGAAGAAAAAGCTTGGATCAAAAGGAACTCTAGATTCTTTGAAAAAAAATAGCAACAATCGATTTTCTAGTCAGGGAAAGGAGGTCGAGGCTGACCCTTTGAATTTTGAGAAGGGAGAACCCGGATAAAAAAAGGATTCTCGATTCTTCAAGAGAAATGGGAAATGACCAGCTTCCCAGTTGGAGGAACAAAGCCAGGCTAATGTTGAGGCCGACCCTTGGATATCGAGGAAGGAGAGCCGAAATCAAAAGAGATTCTCAATTCCTCAAAAGAAAGAGCAAACAATTAATTCCCCAACCTTCCCAACCAAAGGAAAAAACCGATGCCGAAGCCGAAGCCAACCAAAGAAGCCATTCAGCAGAAACTTTGGAATCAATCTCACTCACCATAAAGAATAAAAAGGGTAAATATCAGAACTAG mRNA sequence ATGGTATCGATCAAGATCATTGCCCATGAAAGACCTAAGGGGGTGGGCGAATTAGATCCCCATGACCCCAAACCAGAAGAGCAAAAGGTTTTGAAGCTACGTGTTGAAGCAACAGACAAAGAAGAAAGTGAAAGGAACAAAGTAGAGTCAAAACAGGTTTGTTCCGTCGAAGCTGAGGTCGAGGCAGATCCTTGGAGGATTCTAGATAAGAAGTTTGACGTCGAGGCTGAGGCTAACCCTTGGAGTTTTGAGAGGGGAGAACCCAGACAACAAAGAATTCTAAATTCTTCTAGAGAAAGGAGAGACAACCAACTTCCTAGTCGAGAGAACAAGGTCAAGGCTAATGCCAAGGCCAACCCTTGGAGTTTTAAGAAGAAAAAGCTTGGATCAAAAGGAACTCTAGATTCTTTGAAAAAAAATAGCAACAATCGATTTTCTAGTCAGGGAAAGGAGAACCCGGATAAAAAAAGGATTCTCGATTCTTCAAGAGAAATGGGAAATGACCAGCTTCCCAGTTGGAGGAACAAAGCCAGGCTAATGTTGAGGCCGACCCTTGGATATCGAGGAAGGAGAGCCGAAATCAAAAGAGATTCTCAATTCCTCAAAAGAAAGAGCAAACAATTAATTCCCCAACCTTCCCAACCAAAGGAAAAAACCGATGCCGAAGCCGAAGCCAACCAAAGAAGCCATTCAGCAGAAACTTTGGAATCAATCTCACTCACCATAAAGAATAAAAAGGGTAAATATCAGAACTAG Coding sequence (CDS) ATGGTATCGATCAAGATCATTGCCCATGAAAGACCTAAGGGGGTGGGCGAATTAGATCCCCATGACCCCAAACCAGAAGAGCAAAAGGTTTTGAAGCTACGTGTTGAAGCAACAGACAAAGAAGAAAGTGAAAGGAACAAAGTAGAGTCAAAACAGGTTTGTTCCGTCGAAGCTGAGGTCGAGGCAGATCCTTGGAGGATTCTAGATAAGAAGTTTGACGTCGAGGCTGAGGCTAACCCTTGGAGTTTTGAGAGGGGAGAACCCAGACAACAAAGAATTCTAAATTCTTCTAGAGAAAGGAGAGACAACCAACTTCCTAGTCGAGAGAACAAGGTCAAGGCTAATGCCAAGGCCAACCCTTGGAGTTTTAAGAAGAAAAAGCTTGGATCAAAAGGAACTCTAGATTCTTTGAAAAAAAATAGCAACAATCGATTTTCTAGTCAGGGAAAGGAGAACCCGGATAAAAAAAGGATTCTCGATTCTTCAAGAGAAATGGGAAATGACCAGCTTCCCAGTTGGAGGAACAAAGCCAGGCTAATGTTGAGGCCGACCCTTGGATATCGAGGAAGGAGAGCCGAAATCAAAAGAGATTCTCAATTCCTCAAAAGAAAGAGCAAACAATTAATTCCCCAACCTTCCCAACCAAAGGAAAAAACCGATGCCGAAGCCGAAGCCAACCAAAGAAGCCATTCAGCAGAAACTTTGGAATCAATCTCACTCACCATAAAGAATAAAAAGGGTAAATATCAGAACTAG Protein sequence MVSIKIIAHERPKGVGELDPHDPKPEEQKVLKLRVEATDKEESERNKVESKQVCSVEAEVEADPWRILDKKFDVEAEANPWSFERGEPRQQRILNSSRERRDNQLPSRENKVKANAKANPWSFKKKKLGSKGTLDSLKKNSNNRFSSQGKENPDKKRILDSSREMGNDQLPSWRNKARLMLRPTLGYRGRRAEIKRDSQFLKRKSKQLIPQPSQPKEKTDAEAEANQRSHSAETLESISLTIKNKKGKYQN
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Bhi01M001174.exon1 | Bhi01M001174.exon1 | exon |
Bhi01M001174.exon2 | Bhi01M001174.exon2 | exon |
Bhi01M001174.exon3 | Bhi01M001174.exon3 | exon |
Bhi01M001174.exon4 | Bhi01M001174.exon4 | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
cds.Bhi01M001174 | cds.Bhi01M001174 | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
Bhi01M001174 | Bhi01M001174-protein | polypeptide |
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 196..251 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 230..251 |
|