Bhi01M001042 (mRNA) Wax gourd

NameBhi01M001042
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr1 : 28975194 .. 28975618 (+)
Sequence length402
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTCATAAACATCCAGAACTTAGGCAAGCTTTCTTGGGAGATGAAGTAGCCGGAGAAAAGGAAAAACGCAGCGAGGAGAACGGTAACGAGCGACGTCCCCGCGATGAAATTCGGGGCGAGGGAGCTCAAGAAAAGAACGAAGGAATTGGCCATGAGAATGATGATCCAGATGACGAGGACGAAGTAGGCGAAAGCTTGCCACGTGGCGCAGAGTCCGACGAGGAAGTAGACGGAGGCGGAGTAGATGACGGCAACGGCGAGGAGGTAAGGGAGGAAAACGAGGGTGTTGGCGATTATGTAAGAGGAGAGACGGTAGACGCCGGCGGAGGTTTCACGGAGGAGAATGGGGCGTTCGTTGAGGAAAATGGGGAGAGTTTCGGTTGTGGAAGAGAGGAGGAATGTAAGCGTGAAGGCGAATAG

mRNA sequence

ATGAAGCAAGCTTTCTTGGGAGATGAAGTAGCCGGAGAAAAGGAAAAACGCAGCGAGGAGAACGGTAACGAGCGACGTCCCCGCGATGAAATTCGGGGCGAGGGAGCTCAAGAAAAGAACGAAGGAATTGGCCATGAGAATGATGATCCAGATGACGAGGACGAAGTAGGCGAAAGCTTGCCACGTGGCGCAGAGTCCGACGAGGAAGTAGACGGAGGCGGAGTAGATGACGGCAACGGCGAGGAGGTAAGGGAGGAAAACGAGGGTGTTGGCGATTATGTAAGAGGAGAGACGGTAGACGCCGGCGGAGGTTTCACGGAGGAGAATGGGGCGTTCGTTGAGGAAAATGGGGAGAGTTTCGGTTGTGGAAGAGAGGAGGAATGTAAGCGTGAAGGCGAATAG

Coding sequence (CDS)

ATGAAGCAAGCTTTCTTGGGAGATGAAGTAGCCGGAGAAAAGGAAAAACGCAGCGAGGAGAACGGTAACGAGCGACGTCCCCGCGATGAAATTCGGGGCGAGGGAGCTCAAGAAAAGAACGAAGGAATTGGCCATGAGAATGATGATCCAGATGACGAGGACGAAGTAGGCGAAAGCTTGCCACGTGGCGCAGAGTCCGACGAGGAAGTAGACGGAGGCGGAGTAGATGACGGCAACGGCGAGGAGGTAAGGGAGGAAAACGAGGGTGTTGGCGATTATGTAAGAGGAGAGACGGTAGACGCCGGCGGAGGTTTCACGGAGGAGAATGGGGCGTTCGTTGAGGAAAATGGGGAGAGTTTCGGTTGTGGAAGAGAGGAGGAATGTAAGCGTGAAGGCGAATAG

Protein sequence

MKQAFLGDEVAGEKEKRSEENGNERRPRDEIRGEGAQEKNEGIGHENDDPDDEDEVGESLPRGAESDEEVDGGGVDDGNGEEVREENEGVGDYVRGETVDAGGGFTEENGAFVEENGESFGCGREEECKREGE
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi01G001042Bhi01G001042gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi01M001042.exon1Bhi01M001042.exon1exon
Bhi01M001042.exon2Bhi01M001042.exon2exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi01M001042cds.Bhi01M001042CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi01M001042Bhi01M001042-proteinpolypeptide


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 129..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..46