Bhi01M000042 (mRNA) Wax gourd
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTCGGCATGTGGCATCTAAAAAGAAATATTCTCCCCCTTTTTCTTGGCCCCCAAAAATCGCAGAGCCTCCATCGTATTTTACATCAAACGATTCAAAAAAGTTCTGTGAGAAAAGGAAAAAAAAAAAAAAAATCCAAATCCCTTCGAAGAACAGAAAATGAGTCGAAAAATCCGCGTAATCTGCAACGATCCAGATGGAACCGATTCATCTTCAAGCGAAAACGAAAGAGACGAAACAAAATCTTCAAAATCCAAACGCATAGTACGAGAAATTCACTTCCCCGTTTTCCCTTCTCACTCTTCTTCTTCTAAATCAATCCATGATGAATCCCCTCAGAGCTCTTCTCTCGACAGCAACAATGGCGGAGAAACCCAACAGCCAAGAAACATTAGGGTTCTAACCAAAACCCTAACGACTGGAAGAACAGCCTGTCGATATAGAGGCGTGAGGCAGAGAAAATGGGGGAAATGGGCTGCTGAAATTCGAGACCCTTTCAAGAGAGCTCGAATTTGGCTTGGAACTTATAATACAGCCGAGGAAGCTTCTAGGGCTTACGAATCGAAGCGGCTCGAGTTCCAATCTGCCATGGCCACCTCCCCCAAAGCTCCACCGCGGTTCAAAGCTTCTCATCTACTGAGTTTTTGAACCGTGGAGTTTTCGCCCCGCGGCGGAGTTGACGGCGGGGGAGGAGGAGGGAGAGGGAACCGGCGTCGACGGGAAGGGGAGAATTTTGGTTATTTCCTTTTTTGAATGCCATGTCAGCTTTTCCTTTTAGCAAGTTAAATCTTGCCATGTCAACTTATTGTAGAGCTGAAAGTTGCCACATCAGCTTGTTGTAAAGCTTTAGATTGTACTTTTAATTTCGTTCTTTGTTTCGAGTTCAATGACGTCGAGTGGAATTCGAATGCCCTTTGGAGATTTTGAGAACACATTAATTTGAAAATAAATTTGAGAGCTAAATTGAGAGCTTTTTTTGAATTTATTAAATCCTGCATAGTGTTGTTCATGACTAAGGTACCAAACTAACATACGAAAAATAAATTAAGGTTGGCTCCACCCACCA GTTCGGCATGTGGCATCTAAAAAGAAATATTCTCCCCCTTTTTCTTGGCCCCCAAAAATCGCAGAGCCTCCATCGTATTTTACATCAAACGATTCAAAAAAGTTCTGTGAGAAAAGGAAAAAAAAAAAAAAAATCCAAATCCCTTCGAAGAACAGAAAATGAGTCGAAAAATCCGCGTAATCTGCAACGATCCAGATGGAACCGATTCATCTTCAAGCGAAAACGAAAGAGACGAAACAAAATCTTCAAAATCCAAACGCATAGTACGAGAAATTCACTTCCCCGTTTTCCCTTCTCACTCTTCTTCTTCTAAATCAATCCATGATGAATCCCCTCAGAGCTCTTCTCTCGACAGCAACAATGGCGGAGAAACCCAACAGCCAAGAAACATTAGGGTTCTAACCAAAACCCTAACGACTGGAAGAACAGCCTGTCGATATAGAGGCGTGAGGCAGAGAAAATGGGGGAAATGGGCTGCTGAAATTCGAGACCCTTTCAAGAGAGCTCGAATTTGGCTTGGAACTTATAATACAGCCGAGGAAGCTTCTAGGGCTTACGAATCGAAGCGGCTCGAGTTCCAATCTGCCATGGCCACCTCCCCCAAAGCTCCACCGCGGTTCAAAGCTTCTCATCTACTGAGTTTTTGAACCGTGGAGTTTTCGCCCCGCGGCGGAGTTGACGGCGGGGGAGGAGGAGGGAGAGGGAACCGGCGTCGACGGGAAGGGGAGAATTTTGGTTATTTCCTTTTTTGAATGCCATGTCAGCTTTTCCTTTTAGCAAGTTAAATCTTGCCATGTCAACTTATTGTAGAGCTGAAAGTTGCCACATCAGCTTGTTGTAAAGCTTTAGATTGTACTTTTAATTTCGTTCTTTGTTTCGAGTTCAATGACGTCGAGTGGAATTCGAATGCCCTTTGGAGATTTTGAGAACACATTAATTTGAAAATAAATTTGAGAGCTAAATTGAGAGCTTTTTTTGAATTTATTAAATCCTGCATAGTGTTGTTCATGACTAAGGTACCAAACTAACATACGAAAAATAAATTAAGGTTGGCTCCACCCACCA ATGAGTCGAAAAATCCGCGTAATCTGCAACGATCCAGATGGAACCGATTCATCTTCAAGCGAAAACGAAAGAGACGAAACAAAATCTTCAAAATCCAAACGCATAGTACGAGAAATTCACTTCCCCGTTTTCCCTTCTCACTCTTCTTCTTCTAAATCAATCCATGATGAATCCCCTCAGAGCTCTTCTCTCGACAGCAACAATGGCGGAGAAACCCAACAGCCAAGAAACATTAGGGTTCTAACCAAAACCCTAACGACTGGAAGAACAGCCTGTCGATATAGAGGCGTGAGGCAGAGAAAATGGGGGAAATGGGCTGCTGAAATTCGAGACCCTTTCAAGAGAGCTCGAATTTGGCTTGGAACTTATAATACAGCCGAGGAAGCTTCTAGGGCTTACGAATCGAAGCGGCTCGAGTTCCAATCTGCCATGGCCACCTCCCCCAAAGCTCCACCGCGGTTCAAAGCTTCTCATCTACTGAGTTTTTGA MSRKIRVICNDPDGTDSSSSENERDETKSSKSKRIVREIHFPVFPSHSSSSKSIHDESPQSSSLDSNNGGETQQPRNIRVLTKTLTTGRTACRYRGVRQRKWGKWAAEIRDPFKRARIWLGTYNTAEEASRAYESKRLEFQSAMATSPKAPPRFKASHLLSF
BLAST of Bhi01M000042 vs. TAIR10
Match: AT1G28370.1 (ERF domain protein 11) HSP 1 Score: 80.9 bits (198), Expect = 8.1e-16 Identity = 34/53 (64.15%), Postives = 47/53 (88.68%), Query Frame = 0
BLAST of Bhi01M000042 vs. TAIR10
Match: AT1G68550.1 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 80.5 bits (197), Expect = 1.1e-15 Identity = 34/50 (68.00%), Postives = 44/50 (88.00%), Query Frame = 0
BLAST of Bhi01M000042 vs. TAIR10
Match: AT5G64750.1 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 80.5 bits (197), Expect = 1.1e-15 Identity = 36/53 (67.92%), Postives = 42/53 (79.25%), Query Frame = 0
BLAST of Bhi01M000042 vs. TAIR10
Match: AT5G44210.1 (erf domain protein 9) HSP 1 Score: 79.3 bits (194), Expect = 2.4e-15 Identity = 36/64 (56.25%), Postives = 50/64 (78.12%), Query Frame = 0
BLAST of Bhi01M000042 vs. TAIR10
Match: AT5G50080.1 (ethylene response factor 110) HSP 1 Score: 78.2 bits (191), Expect = 5.3e-15 Identity = 35/53 (66.04%), Postives = 42/53 (79.25%), Query Frame = 0
BLAST of Bhi01M000042 vs. Swiss-Prot
Match: sp|Q9C5I3|ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=ERF11 PE=2 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.5e-14 Identity = 34/53 (64.15%), Postives = 47/53 (88.68%), Query Frame = 0
BLAST of Bhi01M000042 vs. Swiss-Prot
Match: sp|Q9FGF8|ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana OX=3702 GN=ABR1 PE=2 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 1.9e-14 Identity = 36/53 (67.92%), Postives = 42/53 (79.25%), Query Frame = 0
BLAST of Bhi01M000042 vs. Swiss-Prot
Match: sp|Q9CA27|EF118_ARATH (Ethylene-responsive transcription factor ERF118 OS=Arabidopsis thaliana OX=3702 GN=ERF118 PE=2 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 1.9e-14 Identity = 34/50 (68.00%), Postives = 44/50 (88.00%), Query Frame = 0
BLAST of Bhi01M000042 vs. Swiss-Prot
Match: sp|Q9FE67|ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ERF9 PE=2 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 4.2e-14 Identity = 36/64 (56.25%), Postives = 50/64 (78.12%), Query Frame = 0
BLAST of Bhi01M000042 vs. Swiss-Prot
Match: sp|Q6K7E6|ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=EREBP1 PE=1 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 7.2e-14 Identity = 36/61 (59.02%), Postives = 48/61 (78.69%), Query Frame = 0
BLAST of Bhi01M000042 vs. TrEMBL
Match: tr|A0A0A0L811|A0A0A0L811_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G133130 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 2.5e-35 Identity = 119/164 (72.56%), Postives = 123/164 (75.00%), Query Frame = 0
BLAST of Bhi01M000042 vs. TrEMBL
Match: tr|A0A1S3AYM8|A0A1S3AYM8_CUCME (ethylene-responsive transcription factor ERF118-like OS=Cucumis melo OX=3656 GN=LOC103484175 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 7.2e-35 Identity = 115/164 (70.12%), Postives = 122/164 (74.39%), Query Frame = 0
BLAST of Bhi01M000042 vs. TrEMBL
Match: tr|A0A1S3BD92|A0A1S3BD92_CUCME (ethylene-responsive transcription factor ERF118 OS=Cucumis melo OX=3656 GN=LOC103488620 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 5.4e-30 Identity = 80/145 (55.17%), Postives = 90/145 (62.07%), Query Frame = 0
BLAST of Bhi01M000042 vs. TrEMBL
Match: tr|A0A0A0K880|A0A0A0K880_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G039270 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.6e-24 Identity = 71/144 (49.31%), Postives = 77/144 (53.47%), Query Frame = 0
BLAST of Bhi01M000042 vs. TrEMBL
Match: tr|A0A1U7YIQ0|A0A1U7YIQ0_NICSY (ethylene-responsive transcription factor ERF118-like OS=Nicotiana sylvestris OX=4096 GN=LOC104245253 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.8e-22 Identity = 68/143 (47.55%), Postives = 81/143 (56.64%), Query Frame = 0
BLAST of Bhi01M000042 vs. NCBI nr
Match: XP_022980438.1 (ethylene-responsive transcription factor ERF118-like [Cucurbita maxima]) HSP 1 Score: 191.0 bits (484), Expect = 3.1e-45 Identity = 137/162 (84.57%), Postives = 145/162 (89.51%), Query Frame = 0
BLAST of Bhi01M000042 vs. NCBI nr
Match: XP_022924585.1 (ethylene-responsive transcription factor ERF118-like [Cucurbita moschata] >XP_023528036.1 ethylene-responsive transcription factor ERF118-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 182.2 bits (461), Expect = 1.4e-42 Identity = 138/162 (85.19%), Postives = 144/162 (88.89%), Query Frame = 0
BLAST of Bhi01M000042 vs. NCBI nr
Match: XP_004134382.1 (PREDICTED: ethylene-responsive transcription factor ERF118-like [Cucumis sativus]) HSP 1 Score: 157.5 bits (397), Expect = 3.8e-35 Identity = 118/164 (71.95%), Postives = 122/164 (74.39%), Query Frame = 0
BLAST of Bhi01M000042 vs. NCBI nr
Match: KGN56762.1 (hypothetical protein Csa_3G133130 [Cucumis sativus]) HSP 1 Score: 157.5 bits (397), Expect = 3.8e-35 Identity = 119/164 (72.56%), Postives = 123/164 (75.00%), Query Frame = 0
BLAST of Bhi01M000042 vs. NCBI nr
Match: XP_008439360.1 (PREDICTED: ethylene-responsive transcription factor ERF118-like [Cucumis melo]) HSP 1 Score: 156.0 bits (393), Expect = 1.1e-34 Identity = 115/164 (70.12%), Postives = 122/164 (74.39%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
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