gCucsa.339550.2 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCCCCCTCTTCACCTTCCTGATTTCAACTCTTCTATTCTCAGCAGCCATTCTTCTTCCTTGACCTTTTCTGTACAAAGCCAACAGCATTTTGTGGAGGTAACATCGAAATGGGTTTTAAGGAGATTCGGGTTCAAGTCGGCATACTGGTAAATTTAAATCAAAATTTCATTGTAGTTTCTATGGTTGGTCAAATCTCTAAACGTTTTATTCATTACTCTGTTAACAATTATCAAATGTAGCATGTCTTTGAGATGTTTAGGAGATTTAATCAAATCAAAGGGATTCGAAAGAAATTTTCAGGGCCCAAAAGACATCAAAGTTTGAATGATACGTACTAAAAATGATAATTTAACAATTTCTTAAGAAACTTATAGTTGACTTTGGCATGTGACTCGCACATGCAGGCTGACACTAGTCACCAATCGACTGGTGACAAGACACCAAGATGAAGACCATCGAGGCTATGTTCTTTAAATGATGAAAATTTCAGAGATTCAAGATTCATAATGGATAGCCATCAGATTCTGGCGAAACAGAAACTGGGCTTCTCTGCTTCACTCCGAGAAGCCTTCAAAATTTTCTTTCATTGTCCAAACTTCATTTCTCTCGTCATCGTCTTCTCCTTCCCCTTCTTTGCCTCTCTCCTCGCCCACCACATTCTCCTTCATCCAACCTTCGTTCAACTCCTCAAACTTCTCTCTCAGGAAAATCCTTTTGATCCATCTCAAAGGTACATCATCAGGTGTCAGCTAGGTGATACCAGACACTGCTTATCGCAACGCTCCTCTGACAACTATAACTTAAAAGAAACTCTCTCCCACAGGTTTCTGATCTCAACTCTTCTCTCTTCAGTACTCATCTTCTTCCTAGACCTTCTCTCCACAATCTCAACGGTCTCCATATCAGCATCAATATATGCAGGAAACTCTCAAATGGGTTTCAAGGAGATGCTGGTTGAGGTCAGAAAGCTGTTGGCTGCAAGACTGAGAGGCACAATGGCAACATCTCTGTATGTTCTTTTGATTGCTTCACTAACTCTGCTGGGTTTGGTCGCTTTGTCAACAAACATGTTTTTGATGCCAAAAAGCTCATTTATCTTTGGGACAATCTTTGTAATTTTGTTGGCAAAATACATAGAGTGGAGTGCTATTTGGAACATGGGAATTGTTATCTCAATCTTGGATAAGAACCATGGATACATAGCAATTGGAGTGGCAGCATATTTAAGCCGAGGCAGCAGGAAATTAGGGTTCAGTTTGATGCTAGTTTTCTTTGCTTTGAAGGTAGCTTTTGCGCTACCATGTCTCTATGCTTTGTGGAATGAGGGGAGTTGTGGGGCTTTGGGGAATGTGGTGTCTGTGAGTTTTAAGTGTGTGGGAGATATTGTAATGTGGGTTGTTCTCATGGTTTATTTCTATGACTGCAAAAGGGAATTTTTGGAGAAGAAGATCGATTTGGAGAATAATGGGAAAGCCATAAAGGCTAATCAACAATAAATCCAATGGAATGGAAGTATGCTTTTGAATCACGTACTATCAATTATTATTATTCAACTGGTAGATTTAAGAGTAGTCAAGAAACCTATATGCTTCACCTTTTCAGTCCTCCATGAAAGCCTGTAAATTGGAGCAATGAAGCTCTGTTTCTCCACTTCAGCTGTTGAAGAAAGAGAAATTCCTTCCTACAATTGTACTAAAATGATAAACATAGGAATGTAATTAGCATATAAAAAGGATTGGTTTAATTGCGAATAATCACCGTAATTTTGAGTAAATTCAATCTAACCCTTCATCAACACGTCCTATTTTTAGCAAATTTTCAGAGAAAACCGCCATGGCCAAGTATCAATGTTCTTGGCTATTACACATCCACTTGGCCCcTCCCCCATTTCACTTGCAC TTTCCCCCTCTTCACCTTCCTGATTTCAACTCTTCTATTCTCAGCAGCCATTCTTCTTCCTTGACCTTTTCTGTACAAAGCCAACAGCATTTTGTGGAGGTAACATCGAAATGGGTTTTAAGGAGATTCGGGTTCAAGTCGGCATACTGGTAAATTTAAATCAAAATTTCATTGTAGTTTCTATGGTTGGTCAAATCTCTAAACGTTTTATTCATTACTCTGTTAACAATTATCAAATGTAGCATGTCTTTGAGATGTTTAGGAGATTTAATCAAATCAAAGGGATTCGAAAGAAATTTTCAGGGCCCAAAAGACATCAAAGTTTGAATGATACGTACTAAAAATGATAATTTAACAATTTCTTAAGAAACTTATAGTTGACTTTGGCATGTGACTCGCACATGCAGGCTGACACTAGTCACCAATCGACTGGTGACAAGACACCAAGATGAAGACCATCGAGGCTATGTTCTTTAAATGATGAAAATTTCAGAGATTCAAGATTCATAATGGATAGCCATCAGATTCTGGCGAAACAGAAACTGGGCTTCTCTGCTTCACTCCGAGAAGCCTTCAAAATTTTCTTTCATTGTCCAAACTTCATTTCTCTCGTCATCGTCTTCTCCTTCCCCTTCTTTGCCTCTCTCCTCGCCCACCACATTCTCCTTCATCCAACCTTCGTTCAACTCCTCAAACTTCTCTCTCAGGAAAATCCTTTTGATCCATCTCAAAGGTACATCATCAGGTGTCAGCTAGGTGATACCAGACACTGCTTATCGCAACGCTCCTCTGACAACTATAACTTAAAAGAAACTCTCTCCCACAGGTTTCTGATCTCAACTCTTCTCTCTTCAGTACTCATCTTCTTCCTAGACCTTCTCTCCACAATCTCAACGGTCTCCATATCAGCATCAATATATGCAGGAAACTCTCAAATGGGTTTCAAGGAGATGCTGGTTGAGGTCAGAAAGCTGTTGGCTGCAAGACTGAGAGGCACAATGGCAACATCTCTGTATGTTCTTTTGATTGCTTCACTAACTCTGCTGGGTTTGGTCGCTTTGTCAACAAACATGTTTTTGATGCCAAAAAGCTCATTTATCTTTGGGACAATCTTTGTAATTTTGTTGGCAAAATACATAGAGTGGAGTGCTATTTGGAACATGGGAATTGTTATCTCAATCTTGGATAAGAACCATGGATACATAGCAATTGGAGTGGCAGCATATTTAAGCCGAGGCAGCAGGAAATTAGGGTTCAGTTTGATGCTAGTTTTCTTTGCTTTGAAGGTAGCTTTTGCGCTACCATGTCTCTATGCTTTGTGGAATGAGGGGAGTTGTGGGGCTTTGGGGAATGTGGTGTCTGTGAGTTTTAAGTGTGTGGGAGATATTGTAATGTGGGTTGTTCTCATGGTTTATTTCTATGACTGCAAAAGGGAATTTTTGGAGAAGAAGATCGATTTGGAGAATAATGGGAAAGCCATAAAGGCTAATCAACAATAAATCCAATGGAATGGAAGTATGCTTTTGAATCACGTACTATCAATTATTATTATTCAACTGGTAGATTTAAGAGTAGTCAAGAAACCTATATGCTTCACCTTTTCAGTCCTCCATGAAAGCCTGTAAATTGGAGCAATGAAGCTCTGTTTCTCCACTTCAGCTGTTGAAGAAAGAGAAATTCCTTCCTACAATTGTACTAAAATGATAAACATAGGAATGTAATTAGCATATAAAAAGGATTGGTTTAATTGCGAATAATCACCGTAATTTTGAGTAAATTCAATCTAACCCTTCATCAACACGTCCTATTTTTAGCAAATTTTCAGAGAAAACCGCCATGGCCAAGTATCAATGTTCTTGGCTATTACACATCCACTTGGCCCCTCCCCCATTTCACTTGCAC ATGGATAGCCATCAGATTCTGGCGAAACAGAAACTGGGCTTCTCTGCTTCACTCCGAGAAGCCTTCAAAATTTTCTTTCATTGTCCAAACTTCATTTCTCTCGTCATCGTCTTCTCCTTCCCCTTCTTTGCCTCTCTCCTCGCCCACCACATTCTCCTTCATCCAACCTTCGTTCAACTCCTCAAACTTCTCTCTCAGGAAAATCCTTTTGATCCATCTCAAAGGTACATCATCAGGTGTCAGCTAGGTGATACCAGACACTGCTTATCGCAACGCTCCTCTGACAACTATAACTTAAAAGAAACTCTCTCCCACAGGTTTCTGATCTCAACTCTTCTCTCTTCAGTACTCATCTTCTTCCTAGACCTTCTCTCCACAATCTCAACGGTCTCCATATCAGCATCAATATATGCAGGAAACTCTCAAATGGGTTTCAAGGAGATGCTGGTTGAGGTCAGAAAGCTGTTGGCTGCAAGACTGAGAGGCACAATGGCAACATCTCTGTATGTTCTTTTGATTGCTTCACTAACTCTGCTGGGTTTGGTCGCTTTGTCAACAAACATGTTTTTGATGCCAAAAAGCTCATTTATCTTTGGGACAATCTTTGTAATTTTGTTGGCAAAATACATAGAGTGGAGTGCTATTTGGAACATGGGAATTGTTATCTCAATCTTGGATAAGAACCATGGATACATAGCAATTGGAGTGGCAGCATATTTAAGCCGAGGCAGCAGGAAATTAGGGTTCAGTTTGATGCTAGTTTTCTTTGCTTTGAAGGTAGCTTTTGCGCTACCATGTCTCTATGCTTTGTGGAATGAGGGGAGTTGTGGGGCTTTGGGGAATGTGGTGTCTGTGAGTTTTAAGTGTGTGGGAGATATTGTAATGTGGGTTGTTCTCATGGTTTATTTCTATGACTGCAAAAGGGAATTTTTGGAGAAGAAGATCGATTTGGAGAATAATGGGAAAGCCATAAAGGCTAATCAACAATAA MDSHQILAKQKLGFSASLREAFKIFFHCPNFISLVIVFSFPFFASLLAHHILLHPTFVQLLKLLSQENPFDPSQRYIIRCQLGDTRHCLSQRSSDNYNLKETLSHRFLISTLLSSVLIFFLDLLSTISTVSISASIYAGNSQMGFKEMLVEVRKLLAARLRGTMATSLYVLLIASLTLLGLVALSTNMFLMPKSSFIFGTIFVILLAKYIEWSAIWNMGIVISILDKNHGYIAIGVAAYLSRGSRKLGFSLMLVFFALKVAFALPCLYALWNEGSCGALGNVVSVSFKCVGDIVMWVVLMVYFYDCKREFLEKKIDLENNGKAIKANQQ*
BLAST of gCucsa.339550.2 vs. TrEMBL
Match: A0A0A0LG51_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G835840 PE=4 SV=1) HSP 1 Score: 645.2 bits (1663), Expect = 4.3e-182 Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 1
BLAST of gCucsa.339550.2 vs. TrEMBL
Match: A0A0A0LCA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G835820 PE=4 SV=1) HSP 1 Score: 425.6 bits (1093), Expect = 5.4e-116 Identity = 228/355 (64.23%), Postives = 271/355 (76.34%), Query Frame = 1
BLAST of gCucsa.339550.2 vs. TrEMBL
Match: F6HV11_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g01570 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 5.5e-60 Identity = 135/332 (40.66%), Postives = 196/332 (59.04%), Query Frame = 1
BLAST of gCucsa.339550.2 vs. TrEMBL
Match: A0A059AQF3_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_I01825 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 1.7e-56 Identity = 138/332 (41.57%), Postives = 191/332 (57.53%), Query Frame = 1
BLAST of gCucsa.339550.2 vs. TrEMBL
Match: A0A067GQ81_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020992mg PE=4 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 3.2e-52 Identity = 126/329 (38.30%), Postives = 183/329 (55.62%), Query Frame = 1
BLAST of gCucsa.339550.2 vs. TAIR10
Match: AT1G23830.1 (AT1G23830.1 unknown protein) HSP 1 Score: 116.3 bits (290), Expect = 3.5e-26 Identity = 93/359 (25.91%), Postives = 166/359 (46.24%), Query Frame = 1
BLAST of gCucsa.339550.2 vs. TAIR10
Match: AT1G23840.1 (AT1G23840.1 unknown protein) HSP 1 Score: 96.3 bits (238), Expect = 3.8e-20 Identity = 51/135 (37.78%), Postives = 79/135 (58.52%), Query Frame = 1
HSP 2 Score: 55.8 bits (133), Expect = 5.7e-08 Identity = 64/255 (25.10%), Postives = 112/255 (43.92%), Query Frame = 1
BLAST of gCucsa.339550.2 vs. TAIR10
Match: AT1G23850.1 (AT1G23850.1 unknown protein) HSP 1 Score: 89.0 bits (219), Expect = 6.1e-18 Identity = 48/132 (36.36%), Postives = 73/132 (55.30%), Query Frame = 1
HSP 2 Score: 51.6 bits (122), Expect = 1.1e-06 Identity = 46/182 (25.27%), Postives = 83/182 (45.60%), Query Frame = 1
BLAST of gCucsa.339550.2 vs. TAIR10
Match: AT1G31130.1 (AT1G31130.1 unknown protein) HSP 1 Score: 56.6 bits (135), Expect = 3.3e-08 Identity = 71/301 (23.59%), Postives = 123/301 (40.86%), Query Frame = 1
BLAST of gCucsa.339550.2 vs. NCBI nr
Match: gi|778685767|ref|XP_011652270.1| (PREDICTED: uncharacterized protein LOC105435005 [Cucumis sativus]) HSP 1 Score: 645.2 bits (1663), Expect = 6.2e-182 Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 1
BLAST of gCucsa.339550.2 vs. NCBI nr
Match: gi|659085576|ref|XP_008443494.1| (PREDICTED: uncharacterized protein LOC103487071 [Cucumis melo]) HSP 1 Score: 601.7 bits (1550), Expect = 7.9e-169 Identity = 307/329 (93.31%), Postives = 314/329 (95.44%), Query Frame = 1
BLAST of gCucsa.339550.2 vs. NCBI nr
Match: gi|778685770|ref|XP_011652271.1| (PREDICTED: uncharacterized protein LOC105435006 [Cucumis sativus]) HSP 1 Score: 425.6 bits (1093), Expect = 7.7e-116 Identity = 228/355 (64.23%), Postives = 271/355 (76.34%), Query Frame = 1
BLAST of gCucsa.339550.2 vs. NCBI nr
Match: gi|731419195|ref|XP_010660939.1| (PREDICTED: uncharacterized protein LOC104881673 isoform X1 [Vitis vinifera]) HSP 1 Score: 239.6 bits (610), Expect = 7.9e-60 Identity = 135/332 (40.66%), Postives = 196/332 (59.04%), Query Frame = 1
BLAST of gCucsa.339550.2 vs. NCBI nr
Match: gi|629089815|gb|KCW56068.1| (hypothetical protein EUGRSUZ_I01825, partial [Eucalyptus grandis]) HSP 1 Score: 228.0 bits (580), Expect = 2.4e-56 Identity = 138/332 (41.57%), Postives = 191/332 (57.53%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |