MELO3C035743.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCCCCACAGACGACTTTGGAGTAGGTGAAGCCTCTCCGGAGTTAGTTAGATGGGCTATGTGCATAATGCAAGTAGTCGAGATAACGTAATTATAAAAAAGCTAATCAAAGACAAAAGTCAATAGTTGCTTCCTTCAGTTTCTCAATTGTTCTAGTATAGTCGCATTTGCTGTCATAATAATAAGTTCTGAAGTTTATTTGTAAATATGTTGTGCTCTATCGACTAAAAATGGTAGTTTAAATATGGGAATGAAGAAATTATCTTATATTGAAATATCATTATTATGATGCAGTGCAGCTTCATTTCCAAGAGTTAAGGATGATTCATCCTTCCGGATGAAATTAGTTTGTAATCATTTGACACCAGTTATTCTTTACTTGCTTCAATGGGTGGATTGCTCATGTTCCTTTCTATCATTGAGCTACTTCAACCTATTCCACATAGTTCTGTACAAGGTGATCAAATTGACTAAAAATACTAAAAGTATTTGATATAATTTAAATTTACCATAATCCACCTGCTTAAACCCTTTTATGTCATTTACTCCTCTAATAAGTTTCAAACTTACAAGTAACAGGGTGTTAGAGTATTTGGTTTAATTAAATTTGCCATAATCCGACAAGTATTTTAGGTTCATCAATGATTTAACAAGAATAAGAAAAAAAAATGAAAAAAAGGTAATAGAAGAGAGACGAATAATGAAGTTTGATGATTCGTGTTAATCCACAGGTGGACTTTCATGGAAGGCCAGATATCTCATCATACGGAAGGAAGGCAACTATAAGCGAATTCTACTGTATGTGA ATGATCCCCACAGACGACTTTGGAGTAGGTGAAGCCTCTCCGGAGTTAGTTAGATGGGCTATGTGCATAATGCAAGTAGTCGAGATAACTGCAGCTTCATTTCCAAGAGTTAAGGATGATTCATCCTTCCGGATGAAATTAGTTTGTAATCATTTGACACCAGTTATTCTTTACTTGCTTCAATGGGTGGATTGCTCATGTTCCTTTCTATCATTGAGCTACTTCAACCTATTCCACATAGTTCTGTACAAGGTGGACTTTCATGGAAGGCCAGATATCTCATCATACGGAAGGAAGGCAACTATAAGCGAATTCTACTGTATGTGA ATGATCCCCACAGACGACTTTGGAGTAGGTGAAGCCTCTCCGGAGTTAGTTAGATGGGCTATGTGCATAATGCAAGTAGTCGAGATAACTGCAGCTTCATTTCCAAGAGTTAAGGATGATTCATCCTTCCGGATGAAATTAGTTTGTAATCATTTGACACCAGTTATTCTTTACTTGCTTCAATGGGTGGATTGCTCATGTTCCTTTCTATCATTGAGCTACTTCAACCTATTCCACATAGTTCTGTACAAGGTGGACTTTCATGGAAGGCCAGATATCTCATCATACGGAAGGAAGGCAACTATAAGCGAATTCTACTGTATGTGA MIPTDDFGVGEASPELVRWAMCIMQVVEITAASFPRVKDDSSFRMKLVCNHLTPVILYLLQWVDCSCSFLSLSYFNLFHIVLYKVDFHGRPDISSYGRKATISEFYCM
BLAST of MELO3C035743.2 vs. NCBI nr
Match: XP_016901782.1 (PREDICTED: RING-H2 finger protein ATL47-like [Cucumis melo]) HSP 1 Score: 162.2 bits (409), Expect = 1.0e-36 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0
BLAST of MELO3C035743.2 vs. NCBI nr
Match: XP_011651953.1 (PREDICTED: RING-H2 finger protein ATL47-like [Cucumis sativus] >KGN64372.1 hypothetical protein Csa_1G050110 [Cucumis sativus]) HSP 1 Score: 153.7 bits (387), Expect = 3.6e-34 Identity = 72/76 (94.74%), Postives = 73/76 (96.05%), Query Frame = 0
BLAST of MELO3C035743.2 vs. NCBI nr
Match: XP_022137104.1 (uncharacterized protein LOC111008662 [Momordica charantia]) HSP 1 Score: 137.1 bits (344), Expect = 3.5e-29 Identity = 64/97 (65.98%), Postives = 76/97 (78.35%), Query Frame = 0
BLAST of MELO3C035743.2 vs. NCBI nr
Match: OMO99072.1 (Zinc finger, RING-type [Corchorus capsularis]) HSP 1 Score: 109.4 bits (272), Expect = 7.8e-21 Identity = 52/101 (51.49%), Postives = 67/101 (66.34%), Query Frame = 0
BLAST of MELO3C035743.2 vs. NCBI nr
Match: XP_018837144.1 (PREDICTED: helicase-like transcription factor isoform X1 [Juglans regia]) HSP 1 Score: 105.5 bits (262), Expect = 1.1e-19 Identity = 47/85 (55.29%), Postives = 64/85 (75.29%), Query Frame = 0
BLAST of MELO3C035743.2 vs. TAIR10
Match: AT1G24440.1 (RING/U-box superfamily protein) HSP 1 Score: 79.3 bits (194), Expect = 1.6e-15 Identity = 40/76 (52.63%), Postives = 50/76 (65.79%), Query Frame = 0
BLAST of MELO3C035743.2 vs. TAIR10
Match: AT1G13195.1 (RING/U-box superfamily protein) HSP 1 Score: 77.8 bits (190), Expect = 4.6e-15 Identity = 35/76 (46.05%), Postives = 54/76 (71.05%), Query Frame = 0
BLAST of MELO3C035743.2 vs. TAIR10
Match: AT5G58787.1 (RING/U-box superfamily protein) HSP 1 Score: 50.1 bits (118), Expect = 1.0e-06 Identity = 25/82 (30.49%), Postives = 41/82 (50.00%), Query Frame = 0
BLAST of MELO3C035743.2 vs. TAIR10
Match: AT5G01520.1 (RING/U-box superfamily protein) HSP 1 Score: 47.4 bits (111), Expect = 6.6e-06 Identity = 25/83 (30.12%), Postives = 40/83 (48.19%), Query Frame = 0
BLAST of MELO3C035743.2 vs. Swiss-Prot
Match: sp|Q9M022|AIRP2_ARATH (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.2e-04 Identity = 25/83 (30.12%), Postives = 40/83 (48.19%), Query Frame = 0
BLAST of MELO3C035743.2 vs. TrEMBL
Match: tr|A0A1S4E0L5|A0A1S4E0L5_CUCME (RING-H2 finger protein ATL47-like OS=Cucumis melo OX=3656 GN=LOC103484120 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 6.7e-37 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0
BLAST of MELO3C035743.2 vs. TrEMBL
Match: tr|A0A0A0LU99|A0A0A0LU99_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050110 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 2.4e-34 Identity = 72/76 (94.74%), Postives = 73/76 (96.05%), Query Frame = 0
BLAST of MELO3C035743.2 vs. TrEMBL
Match: tr|A0A1R3JW39|A0A1R3JW39_COCAP (Zinc finger, RING-type OS=Corchorus capsularis OX=210143 GN=CCACVL1_03944 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 5.2e-21 Identity = 52/101 (51.49%), Postives = 67/101 (66.34%), Query Frame = 0
BLAST of MELO3C035743.2 vs. TrEMBL
Match: tr|A0A2I4HIR6|A0A2I4HIR6_9ROSI (helicase-like transcription factor isoform X1 OS=Juglans regia OX=51240 GN=LOC109018365 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 7.5e-20 Identity = 47/85 (55.29%), Postives = 64/85 (75.29%), Query Frame = 0
BLAST of MELO3C035743.2 vs. TrEMBL
Match: tr|A0A2I4FZR7|A0A2I4FZR7_9ROSI (helicase-like transcription factor isoform X1 OS=Juglans regia OX=51240 GN=LOC109003465 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 7.5e-20 Identity = 47/85 (55.29%), Postives = 64/85 (75.29%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |