MELO3C035619.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C035619.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	CAI-1 autoinducer sensor kinase/phosphatase cqsS isoform 2
Location	chr12 : 14081848 .. 14082671 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTGGTTTTAGGTACACATTTATCTCGAACTACGTACTTCCAACACAACGACGTTAGTTCTTCTCAATAATTTTGAGTTATGCGTTGCAGAATTGCCTAGGTGCATTAGATGGAACGTACATAAAAGTGAACGTTTCAGCAAGTGACCGGGCTAGGTATAGAACACGCAAGGGGGAGGTGACCACAAATGTACTTGGCGTGTGTGACACGAAAAGAGATTTCGTTTACGTACTTGCCGGTTGGGAAGGATTAGCTGCACACTCACGCATCCTCCGTGATGCCCTTTCAAGACCTAATGGGCTGAAGGTGCCCAAGGGTAAGTAACAACGACATTGTACCTATGAATGCAATTTTGCAAGTAACAGCTGCGACATTTTAATCGTGCATTGTGGTCACAGGGTATTACTACCTGGTTGATGCCGGGTACCCAAATATGGAGGGTTCCTGGCACCATACAGAGGCCAACGCTATCACTTGCAAGAATGGCGTGGCCCTGAAAATGCACCTTCAACATCGAAAGAGTTCTTCAATATGAAGCATTCGTCTGCTCGTAATGTAATCGAAAGAGCATTCGGTGTCTTGAAGGATCGATGGGGGATACTGCGGGGAAAGTCATACTACCCTGTAGGAGTTCAATGTTGCACAATACTCGCATGTTGTCTCCTCCACAACCTTATCAATAGGGAGATGACAAACTTTGATATAGAAGACAACATAGATGAAGTTGATTCCACCCACGCGACTACTGCCGCCGATGACATACATTACATAGAGACGTCAAATGAGTGGAGTCGACCTTGCAGAAGAAATATTTACTGA

mRNA sequence

ATGGAGGTGGTTTTAGGTACACATTTATCTCGAACTACGTACTTCCAACACAACGACAATTGCCTAGGTGCATTAGATGGAACGTACATAAAAGTGAACGTTTCAGCAAGTGACCGGGCTAGGTATAGAACACGCAAGGGGGAGGTGACCACAAATGTACTTGGCGTGTGTGACACGAAAAGAGATTTCGTTTACGTACTTGCCGGTTGGGAAGGATTAGCTGCACACTCACGCATCCTCCGTGATGCCCTTTCAAGACCTAATGGGCTGAAGGTGCCCAAGGGGTATTACTACCTGGTTGATGCCGGAGGCCAACGCTATCACTTGCAAGAATGGCGTGGCCCTGAAAATGCACCTTCAACATCGAAAGAGTTCTTCAATATGAAGCATTCGTCTGCTCGTAATGTAATCGAAAGAGCATTCGGTGTCTTGAAGGATCGATGGGGGATACTGCGGGGAAAGTCATACTACCCTGTAGGAGTTCAATGTTGCACAATACTCGCATGTTGTCTCCTCCACAACCTTATCAATAGGGAGATGACAAACTTTGATATAGAAGACAACATAGATGAAGTTGATTCCACCCACGCGACTACTGCCGCCGATGACATACATTACATAGAGACGTCAAATGAGTGGAGTCGACCTTGCAGAAGAAATATTTACTGA

Coding sequence (CDS)

ATGGAGGTGGTTTTAGGTACACATTTATCTCGAACTACGTACTTCCAACACAACGACAATTGCCTAGGTGCATTAGATGGAACGTACATAAAAGTGAACGTTTCAGCAAGTGACCGGGCTAGGTATAGAACACGCAAGGGGGAGGTGACCACAAATGTACTTGGCGTGTGTGACACGAAAAGAGATTTCGTTTACGTACTTGCCGGTTGGGAAGGATTAGCTGCACACTCACGCATCCTCCGTGATGCCCTTTCAAGACCTAATGGGCTGAAGGTGCCCAAGGGGTATTACTACCTGGTTGATGCCGGAGGCCAACGCTATCACTTGCAAGAATGGCGTGGCCCTGAAAATGCACCTTCAACATCGAAAGAGTTCTTCAATATGAAGCATTCGTCTGCTCGTAATGTAATCGAAAGAGCATTCGGTGTCTTGAAGGATCGATGGGGGATACTGCGGGGAAAGTCATACTACCCTGTAGGAGTTCAATGTTGCACAATACTCGCATGTTGTCTCCTCCACAACCTTATCAATAGGGAGATGACAAACTTTGATATAGAAGACAACATAGATGAAGTTGATTCCACCCACGCGACTACTGCCGCCGATGACATACATTACATAGAGACGTCAAATGAGTGGAGTCGACCTTGCAGAAGAAATATTTACTGA

Protein sequence

MEVVLGTHLSRTTYFQHNDNCLGALDGTYIKVNVSASDRARYRTRKGEVTTNVLGVCDTKRDFVYVLAGWEGLAAHSRILRDALSRPNGLKVPKGYYYLVDAGGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKDRWGILRGKSYYPVGVQCCTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSRPCRRNIY

Homology

[Close]

BLAST of MELO3C035619.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 370.9 bits (951), Expect = 3.0e-99
Identity = 183/209 (87.56%), Postives = 185/209 (88.52%), Query Frame = 0


Query: 19  DNCLGALDGTYIKVNVSASDRARYRTRKGEVTTNVLGVCDTKRDFVYVLAGWEGLAAHSR 78
           +NCLGALDGTYIKVNV ASDRARYRTRKGEV TNVLGVCDTK DFVYVLAGWEG AA SR
Sbjct: 138 ENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSR 197

Query: 79  ILRDALSRPNGLKVPKGYYYLVDAG------------GQRYHLQEWRGPENAPSTSKEFF 138
           ILRDALSRPN LKVPKGYYYLVD G            GQRYHLQEWRGPENAPSTSKEFF
Sbjct: 198 ILRDALSRPNRLKVPKGYYYLVDVGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFF 257

Query: 139 NMKHSSARNVIERAFGVLKDRWGILRGKSYYPVGVQCCTILACCLLHNLINREMTNFDIE 198
           NMKH SARNVIERAFGVLK RW ILRGKSYYPV VQC TILACCLLHNLINREMTNFDIE
Sbjct: 258 NMKHYSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIE 317

Query: 199 DNIDEVDSTHATTAADDIHYIETSNEWSR 216
           DNIDEVDSTHATTAADDIHYIETSNEWS+
Sbjct: 318 DNIDEVDSTHATTAADDIHYIETSNEWSQ 346

[Close]

BLAST of MELO3C035619.2 vs. NCBI nr
Match: XP_008457266.1 (PREDICTED: putative nuclease HARBI1 [Cucumis melo])

HSP 1 Score: 357.5 bits (916), Expect = 3.4e-95
Identity = 177/208 (85.10%), Postives = 179/208 (86.06%), Query Frame = 0


Query: 20  NCLGALDGTYIKVNVSASDRARYRTRKGEVTTNVLGVCDTKRDFVYVLAGWEGLAAHSRI 79
           NCLGALDGTYIKVNV ASDRARYRTRKGEV TNVLGVCDTK DFVYVL GWEG AA SRI
Sbjct: 79  NCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVYVLVGWEGSAADSRI 138

Query: 80  LRDALSRPNGLKVPKGYYYLVDAG------------GQRYHLQEWRGPENAPSTSKEFFN 139
           LRDALSRPN LKVPKGYYYLVD G            GQRYHLQEWRGPENAPSTSKEFFN
Sbjct: 139 LRDALSRPNELKVPKGYYYLVDVGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFN 198

Query: 140 MKHSSARNVIERAFGVLKDRWGILRGKSYYPVGVQCCTILACCLLHNLINREMTNFDIED 199
           MKHSSARNVIERAFGVLK RW IL GKSYY V VQC TIL CCLLHNLINREMTNFDI+D
Sbjct: 199 MKHSSARNVIERAFGVLKGRWAILWGKSYYLVEVQCRTILTCCLLHNLINREMTNFDIQD 258

Query: 200 NIDEVDSTHATTAADDIHYIETSNEWSR 216
           NIDEVDSTHAT A DDIHYIETSNEWS+
Sbjct: 259 NIDEVDSTHATIATDDIHYIETSNEWSQ 286

[Close]

BLAST of MELO3C035619.2 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 306.2 bits (783), Expect = 9.0e-80
Identity = 153/210 (72.86%), Postives = 171/210 (81.43%), Query Frame = 0


Query: 19  DNCLGALDGTYIKVNVSASDRARYRTRKGEVTTNVLGVCDTKRDFVYVLAGWEGLAAHSR 78
           +NCLGALDGTYIKVNV A DR  +RTRKGE+ TNVLGVCD K DFVYVLAGWEG AA SR
Sbjct: 110 ENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSR 169

Query: 79  ILRDALSRPNGLKVPKGYYYLVDAG------------GQRYHLQEWRGPENAPSTSKEFF 138
           ILRDA+S+ NGL+VPKGYYYL DAG            GQRYHLQEWRG  NAP+ +KE+F
Sbjct: 170 ILRDAISQENGLQVPKGYYYLCDAGYPNAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYF 229

Query: 139 NMKHSSARNVIERAFGVLKDRWGILRGKSYYPVGVQCCTILACCLLHNLINREMTNFDIE 198
           NMKHSSARNVIERAFGVLK RW ILRGKSYYP+ VQC TILAC LLHNLINREMT  +  
Sbjct: 230 NMKHSSARNVIERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLLHNLINREMTYCNDV 289

Query: 199 DNIDEVDSTHA-TTAADDIHYIETSNEWSR 216
           ++ DE DST+A TTA++DI YIET+NEWS+
Sbjct: 290 EDEDEGDSTYATTTASEDIQYIETTNEWSQ 319

[Close]

BLAST of MELO3C035619.2 vs. NCBI nr
Match: XP_008455792.1 (PREDICTED: putative nuclease HARBI1 [Cucumis melo])

HSP 1 Score: 297.0 bits (759), Expect = 5.4e-77
Identity = 148/208 (71.15%), Postives = 161/208 (77.40%), Query Frame = 0


Query: 19  DNCLGALDGTYIKVNVSASDRARYRTRKGEVTTNVLGVCDTKRDFVYVLAGWEGLAAHSR 78
           +NCLGALDGTYIKVNVSA+DR RYRTRKGEV TNVLG CDTK DFV+VL GWEG AA SR
Sbjct: 96  ENCLGALDGTYIKVNVSATDRPRYRTRKGEVATNVLGACDTKGDFVFVLFGWEGSAADSR 155

Query: 79  ILRDALSRPNGLKVPKGYYYLVDAG------------GQRYHLQEWRGPENAPSTSKEFF 138
           ILRDA+SR NGLKVPKGYYYL DAG            G+RYHL EWRG  NAP+T++EFF
Sbjct: 156 ILRDAISRHNGLKVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSEWRGESNAPTTAREFF 215

Query: 139 NMKHSSARNVIERAFGVLKDRWGILRGKSYYPVGVQCCTILACCLLHNLINREMTNFDIE 198
           NMKHSSARNVIERAFG+LK RW ILRGKSYYPV VQC TI+ACCLLHNLINREMTN +I 
Sbjct: 216 NMKHSSARNVIERAFGLLKGRWAILRGKSYYPVDVQCRTIMACCLLHNLINREMTNSEI- 275

Query: 199 DNIDEVDSTHATTAADDIHYIETSNEWS 215
                           +I+YIE SNEWS
Sbjct: 276 ---------------IEINYIEASNEWS 287

[Close]

BLAST of MELO3C035619.2 vs. NCBI nr
Match: XP_016903646.1 (PREDICTED: uncharacterized protein LOC107992265 [Cucumis melo])

HSP 1 Score: 282.7 bits (722), Expect = 1.1e-72
Identity = 148/209 (70.81%), Postives = 150/209 (71.77%), Query Frame = 0


Query: 19  DNCLGALDGTYIKVNVSASDRARYRTRKGEVTTNVLGVCDTKRDFVYVLAGWEGLAAHSR 78
           +NCLGALDGTYIKVNV A                                     AA SR
Sbjct: 96  ENCLGALDGTYIKVNVPARS-----------------------------------AADSR 155

Query: 79  ILRDALSRPNGLKVPKGYYYLVDAG------------GQRYHLQEWRGPENAPSTSKEFF 138
           IL DALSRPNGLKVPKGYYYLVD G            GQ YHLQEWRGPENAPSTSKEFF
Sbjct: 156 ILCDALSRPNGLKVPKGYYYLVDVGYPNAEGFLAPYRGQHYHLQEWRGPENAPSTSKEFF 215

Query: 139 NMKHSSARNVIERAFGVLKDRWGILRGKSYYPVGVQCCTILACCLLHNLINREMTNFDIE 198
           NMKHSSARNVIERAFGVLK RW ILR KSYYPV VQCCTILACCLLHNLINREMTNFDIE
Sbjct: 216 NMKHSSARNVIERAFGVLKGRWAILRKKSYYPVEVQCCTILACCLLHNLINREMTNFDIE 269

Query: 199 DNIDEVDSTHATTAADDIHYIETSNEWSR 216
           DNIDEVDSTHAT AADDIHYIETSNEWS+
Sbjct: 276 DNIDEVDSTHATIAADDIHYIETSNEWSQ 269

[Close]

BLAST of MELO3C035619.2 vs. TAIR10
Match: AT5G41980.1 (Putative harbinger transposase-derived nuclease (InterPro:IPR006912))

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-25
Identity = 62/165 (37.58%), Postives = 89/165 (53.94%), Query Frame = 0


Query: 20  NCLGALDGTYIKVNVSASDRARYRTRKGEVTTNVLGVCDTKRDFVYVLAGWEGLAAHSRI 79
           +C+G +D  +I V V   ++  +R   G +T NVL        F YVLAGWEG A+  ++
Sbjct: 142 DCVGVVDSFHIPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQV 201

Query: 80  LRDALSRPNGLKVPKGYYYLVDAGGQRYHLQEWRGPENAPST-----SKEFFNMKHSSAR 139
           L  AL+R N L+VP+G YY+VD   +  +L  +  P +  ST     +KE FN +H    
Sbjct: 202 LNAALTRRNKLQVPQGKYYIVD--NKYPNLPGFIAPYHGVSTNSREEAKEMFNERHKLLH 261

Query: 140 NVIERAFGVLKDRWGILRGKSYYPVGVQCCTILACCLLHNLINRE 180
             I R FG LK+R+ IL     YP+  Q   ++A C LHN +  E
Sbjct: 262 RAIHRTFGALKERFPILLSAPPYPLQTQVKLVIAACALHNYVRLE 304

[Close]

BLAST of MELO3C035619.2 vs. TAIR10
Match: AT5G35695.1 (Putative harbinger transposase-derived nuclease (InterPro:IPR006912))

HSP 1 Score: 101.7 bits (252), Expect = 6.1e-22
Identity = 58/142 (40.85%), Postives = 74/142 (52.11%), Query Frame = 0


Query: 63  FVYVLAGWEGLAAHSRILRDALSRPNGLKVPKGYYYLVDAG------------GQRYHLQ 122
           F+YVL+GWEG A  SR+L DAL +          +YLVD G            G RYHLQ
Sbjct: 25  FIYVLSGWEGSAHDSRVLSDALRK----------FYLVDCGFANRLNFLAPFRGVRYHLQ 84

Query: 123 EWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKDRWGILRGKSYYPVGVQCCTILACC 182
           E+ G    P T  E FN++H S RNVIER FG+ K R+ I +    +    Q   +L C 
Sbjct: 85  EFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCA 144

Query: 183 LLHNLINREMTNFDIEDNIDEV 193
            LHN + +E  + D  D  DEV
Sbjct: 145 ALHNFLRKECRS-DEADFPDEV 155

[Close]

BLAST of MELO3C035619.2 vs. TAIR10
Match: AT5G28950.1 (unknown protein)

HSP 1 Score: 74.3 bits (181), Expect = 1.0e-13
Identity = 35/84 (41.67%), Postives = 54/84 (64.29%), Query Frame = 0


Query: 12 TTYFQHNDNCLGALDGTYIKVNVSASDRARYRTRKGEVTTNVLGVCDTKRDFVYVLAGWE 71
          T  + +  +C+GA+D T+I   VS      +R RKG+++ N+L  C+   +F+YVL+GWE
Sbjct: 16 TRLYPYFKDCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMYVLSGWE 75

Query: 72 GLAAHSRILRDALSR-PNGLKVPK 95
          G A  S++L DAL+R  N L VP+
Sbjct: 76 GSAHDSKVLNDALTRNSNRLPVPE 99

[Close]

BLAST of MELO3C035619.2 vs. TAIR10
Match: AT1G43722.1 (unknown protein)

HSP 1 Score: 72.4 bits (176), Expect = 3.9e-13
Identity = 46/153 (30.07%), Postives = 71/153 (46.41%), Query Frame = 0


Query: 14  YFQHNDNCLGALDGTYIKVNVSASDRARYRTRKGEVTTNVLGVCDTKRDFVYVLAGWEGL 73
           Y+ +    +GA+DGT++ V V    +  Y  R    + N++ +CD K  F Y+  G  G 
Sbjct: 169 YWPYFSGFVGAMDGTHVCVKVKPDLQGMYWNRHDNASLNIMAICDLKMLFTYIWNGAPGS 228

Query: 74  AAHSRILRDALSRPNGLKVPKG-YYYLVDAGGQ-----------------RYHL-QEWRG 133
              + +L+ A    +   +P    YYLVD+G                   RYH+ Q + G
Sbjct: 229 CYDTAVLQIAQQSDSEFPLPPSEKYYLVDSGYPNKQGLLAPYRSSRNRVVRYHMSQFYYG 288

Query: 134 PENAPSTSKEFFNMKHSSARNVIERAFGVLKDR 148
           P   P    E FN  H+S R+VIER F + K++
Sbjct: 289 PR--PRNKHELFNQCHTSLRSVIERTFRIWKNK 319

[Close]

BLAST of MELO3C035619.2 vs. TAIR10
Match: AT3G19120.1 (PIF / Ping-Pong family of plant transposases)

HSP 1 Score: 45.8 bits (107), Expect = 4.0e-05
Identity = 46/174 (26.44%), Postives = 71/174 (40.80%), Query Frame = 0


Query: 20  NCLGALDGTYIKV--NVSASDRARYRTRKGEVTTNVLGVCDTKRDFVYVLAGWEGLAAHS 79
           N  GA+D T +K+      + R  Y  + G     +  V D K+ F  V     G    S
Sbjct: 223 NICGAIDSTPVKLRRRTKLNPRNIYGCKYGYDAVLLQVVADHKKIFWDVCVKAPGGEDDS 282

Query: 80  RILRDALSRPNGLKVPKGYYYLVDAGGQR---YHLQEW-----------RGPENAPSTSK 139
              RD+L           +  +++  G     Y + +W             P  + +  +
Sbjct: 283 SHFRDSLLYKRLTSGDIVWEKVINIRGHHVRPYIVGDWCYPLLSFLMTPFSPNGSGTPPE 342

Query: 140 EFFNMKHSSARNVIERAFGVLKDRWGILRGKSYYPVGVQCC--TILACCLLHNL 176
             F+      R+V+  A G+LK RW IL+  +   VGV     TI+ACC+LHNL
Sbjct: 343 NLFDGMLMKGRSVVVEAIGLLKARWKILQSLN---VGVNHAPQTIVACCVLHNL 393

[Close]

BLAST of MELO3C035619.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 2.0e-99
Identity = 183/209 (87.56%), Postives = 185/209 (88.52%), Query Frame = 0


Query: 19  DNCLGALDGTYIKVNVSASDRARYRTRKGEVTTNVLGVCDTKRDFVYVLAGWEGLAAHSR 78
           +NCLGALDGTYIKVNV ASDRARYRTRKGEV TNVLGVCDTK DFVYVLAGWEG AA SR
Sbjct: 138 ENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSR 197

Query: 79  ILRDALSRPNGLKVPKGYYYLVDAG------------GQRYHLQEWRGPENAPSTSKEFF 138
           ILRDALSRPN LKVPKGYYYLVD G            GQRYHLQEWRGPENAPSTSKEFF
Sbjct: 198 ILRDALSRPNRLKVPKGYYYLVDVGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFF 257

Query: 139 NMKHSSARNVIERAFGVLKDRWGILRGKSYYPVGVQCCTILACCLLHNLINREMTNFDIE 198
           NMKH SARNVIERAFGVLK RW ILRGKSYYPV VQC TILACCLLHNLINREMTNFDIE
Sbjct: 258 NMKHYSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIE 317

Query: 199 DNIDEVDSTHATTAADDIHYIETSNEWSR 216
           DNIDEVDSTHATTAADDIHYIETSNEWS+
Sbjct: 318 DNIDEVDSTHATTAADDIHYIETSNEWSQ 346

[Close]

BLAST of MELO3C035619.2 vs. TrEMBL
Match: tr|A0A1S3C570|A0A1S3C570_CUCME (putative nuclease HARBI1 OS=Cucumis melo OX=3656 GN=LOC103496992 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 2.2e-95
Identity = 177/208 (85.10%), Postives = 179/208 (86.06%), Query Frame = 0


Query: 20  NCLGALDGTYIKVNVSASDRARYRTRKGEVTTNVLGVCDTKRDFVYVLAGWEGLAAHSRI 79
           NCLGALDGTYIKVNV ASDRARYRTRKGEV TNVLGVCDTK DFVYVL GWEG AA SRI
Sbjct: 79  NCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVYVLVGWEGSAADSRI 138

Query: 80  LRDALSRPNGLKVPKGYYYLVDAG------------GQRYHLQEWRGPENAPSTSKEFFN 139
           LRDALSRPN LKVPKGYYYLVD G            GQRYHLQEWRGPENAPSTSKEFFN
Sbjct: 139 LRDALSRPNELKVPKGYYYLVDVGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFN 198

Query: 140 MKHSSARNVIERAFGVLKDRWGILRGKSYYPVGVQCCTILACCLLHNLINREMTNFDIED 199
           MKHSSARNVIERAFGVLK RW IL GKSYY V VQC TIL CCLLHNLINREMTNFDI+D
Sbjct: 199 MKHSSARNVIERAFGVLKGRWAILWGKSYYLVEVQCRTILTCCLLHNLINREMTNFDIQD 258

Query: 200 NIDEVDSTHATTAADDIHYIETSNEWSR 216
           NIDEVDSTHAT A DDIHYIETSNEWS+
Sbjct: 259 NIDEVDSTHATIATDDIHYIETSNEWSQ 286

[Close]

BLAST of MELO3C035619.2 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 5.9e-80
Identity = 153/210 (72.86%), Postives = 171/210 (81.43%), Query Frame = 0


Query: 19  DNCLGALDGTYIKVNVSASDRARYRTRKGEVTTNVLGVCDTKRDFVYVLAGWEGLAAHSR 78
           +NCLGALDGTYIKVNV A DR  +RTRKGE+ TNVLGVCD K DFVYVLAGWEG AA SR
Sbjct: 110 ENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSR 169

Query: 79  ILRDALSRPNGLKVPKGYYYLVDAG------------GQRYHLQEWRGPENAPSTSKEFF 138
           ILRDA+S+ NGL+VPKGYYYL DAG            GQRYHLQEWRG  NAP+ +KE+F
Sbjct: 170 ILRDAISQENGLQVPKGYYYLCDAGYPNAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYF 229

Query: 139 NMKHSSARNVIERAFGVLKDRWGILRGKSYYPVGVQCCTILACCLLHNLINREMTNFDIE 198
           NMKHSSARNVIERAFGVLK RW ILRGKSYYP+ VQC TILAC LLHNLINREMT  +  
Sbjct: 230 NMKHSSARNVIERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLLHNLINREMTYCNDV 289

Query: 199 DNIDEVDSTHA-TTAADDIHYIETSNEWSR 216
           ++ DE DST+A TTA++DI YIET+NEWS+
Sbjct: 290 EDEDEGDSTYATTTASEDIQYIETTNEWSQ 319

[Close]

BLAST of MELO3C035619.2 vs. TrEMBL
Match: tr|A0A1S3C1U8|A0A1S3C1U8_CUCME (putative nuclease HARBI1 OS=Cucumis melo OX=3656 GN=LOC103495887 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 3.6e-77
Identity = 148/208 (71.15%), Postives = 161/208 (77.40%), Query Frame = 0


Query: 19  DNCLGALDGTYIKVNVSASDRARYRTRKGEVTTNVLGVCDTKRDFVYVLAGWEGLAAHSR 78
           +NCLGALDGTYIKVNVSA+DR RYRTRKGEV TNVLG CDTK DFV+VL GWEG AA SR
Sbjct: 96  ENCLGALDGTYIKVNVSATDRPRYRTRKGEVATNVLGACDTKGDFVFVLFGWEGSAADSR 155

Query: 79  ILRDALSRPNGLKVPKGYYYLVDAG------------GQRYHLQEWRGPENAPSTSKEFF 138
           ILRDA+SR NGLKVPKGYYYL DAG            G+RYHL EWRG  NAP+T++EFF
Sbjct: 156 ILRDAISRHNGLKVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSEWRGESNAPTTAREFF 215

Query: 139 NMKHSSARNVIERAFGVLKDRWGILRGKSYYPVGVQCCTILACCLLHNLINREMTNFDIE 198
           NMKHSSARNVIERAFG+LK RW ILRGKSYYPV VQC TI+ACCLLHNLINREMTN +I 
Sbjct: 216 NMKHSSARNVIERAFGLLKGRWAILRGKSYYPVDVQCRTIMACCLLHNLINREMTNSEI- 275

Query: 199 DNIDEVDSTHATTAADDIHYIETSNEWS 215
                           +I+YIE SNEWS
Sbjct: 276 ---------------IEINYIEASNEWS 287

[Close]

BLAST of MELO3C035619.2 vs. TrEMBL
Match: tr|A0A1S4E5X8|A0A1S4E5X8_CUCME (uncharacterized protein LOC107992265 OS=Cucumis melo OX=3656 GN=LOC107992265 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 7.0e-73
Identity = 148/209 (70.81%), Postives = 150/209 (71.77%), Query Frame = 0


Query: 19  DNCLGALDGTYIKVNVSASDRARYRTRKGEVTTNVLGVCDTKRDFVYVLAGWEGLAAHSR 78
           +NCLGALDGTYIKVNV A                                     AA SR
Sbjct: 96  ENCLGALDGTYIKVNVPARS-----------------------------------AADSR 155

Query: 79  ILRDALSRPNGLKVPKGYYYLVDAG------------GQRYHLQEWRGPENAPSTSKEFF 138
           IL DALSRPNGLKVPKGYYYLVD G            GQ YHLQEWRGPENAPSTSKEFF
Sbjct: 156 ILCDALSRPNGLKVPKGYYYLVDVGYPNAEGFLAPYRGQHYHLQEWRGPENAPSTSKEFF 215

Query: 139 NMKHSSARNVIERAFGVLKDRWGILRGKSYYPVGVQCCTILACCLLHNLINREMTNFDIE 198
           NMKHSSARNVIERAFGVLK RW ILR KSYYPV VQCCTILACCLLHNLINREMTNFDIE
Sbjct: 216 NMKHSSARNVIERAFGVLKGRWAILRKKSYYPVEVQCCTILACCLLHNLINREMTNFDIE 269

Query: 199 DNIDEVDSTHATTAADDIHYIETSNEWSR 216
           DNIDEVDSTHAT AADDIHYIETSNEWS+
Sbjct: 276 DNIDEVDSTHATIAADDIHYIETSNEWSQ 269

The following BLAST results are available for this feature:

BLAST of MELO3C035619.2 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN34114.1	3.0e-99	87.56	retrotransposon protein [Cucumis melo subsp. melo]	[more]
XP_008457266.1	3.4e-95	85.10	PREDICTED: putative nuclease HARBI1 [Cucumis melo]	[more]
ADN33754.1	9.0e-80	72.86	retrotransposon protein [Cucumis melo subsp. melo]	[more]
XP_008455792.1	5.4e-77	71.15	PREDICTED: putative nuclease HARBI1 [Cucumis melo]	[more]
XP_016903646.1	1.1e-72	70.81	PREDICTED: uncharacterized protein LOC107992265 [Cucumis melo]	[more]

BLAST of MELO3C035619.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G41980.1	1.5e-25	37.58	Putative harbinger transposase-derived nuclease (InterPro:IPR006912)	[more]
AT5G35695.1	6.1e-22	40.85	Putative harbinger transposase-derived nuclease (InterPro:IPR006912)	[more]
AT5G28950.1	1.0e-13	41.67	unknown protein	[more]
AT1G43722.1	3.9e-13	30.07	unknown protein	[more]
AT3G19120.1	4.0e-05	26.44	PIF / Ping-Pong family of plant transposases	[more]

BLAST of MELO3C035619.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C035619.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|E5GCB5\|E5GCB5_CUCME	2.0e-99	87.56	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S3C570\|A0A1S3C570_CUCME	2.2e-95	85.10	putative nuclease HARBI1 OS=Cucumis melo OX=3656 GN=LOC103496992 PE=4 SV=1	[more]
tr\|E5GBB2\|E5GBB2_CUCME	5.9e-80	72.86	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S3C1U8\|A0A1S3C1U8_CUCME	3.6e-77	71.15	putative nuclease HARBI1 OS=Cucumis melo OX=3656 GN=LOC103495887 PE=4 SV=1	[more]
tr\|A0A1S4E5X8\|A0A1S4E5X8_CUCME	7.0e-73	70.81	uncharacterized protein LOC107992265 OS=Cucumis melo OX=3656 GN=LOC107992265 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR027806	HARBI1_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016301	kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035619.2.1	MELO3C035619.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027806	Harbinger transposase-derived nuclease domain	PFAM	PF13359	DDE_Tnp_4	coord: 25..174 e-value: 5.8E-18 score: 65.0
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 11..188

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C035619.2	Cucumber (Gy14) v2	cgybmedB022
MELO3C035619.2	Cucurbita maxima (Rimu)	cmamedB216
MELO3C035619.2	Cucumber (Gy14) v1	cgymedB320
MELO3C035619.2	Cucurbita maxima (Rimu)	cmamedB414
MELO3C035619.2	Cucurbita moschata (Rifu)	cmomedB204
MELO3C035619.2	Cucurbita moschata (Rifu)	cmomedB410
MELO3C035619.2	Cucurbita pepo (Zucchini)	cpemedB035
MELO3C035619.2	Cucurbita pepo (Zucchini)	cpemedB564
MELO3C035619.2	Wild cucumber (PI 183967)	cpimedB025
MELO3C035619.2	Cucumber (Chinese Long) v2	cumedB024
MELO3C035619.2	Bottle gourd (USVL1VR-Ls)	lsimedB184
MELO3C035619.2	Watermelon (Charleston Gray)	medwcgB126
MELO3C035619.2	Watermelon (97103) v1	medwmB154
MELO3C035619.2	Silver-seed gourd	carmedB0051
MELO3C035619.2	Silver-seed gourd	carmedB1017
MELO3C035619.2	Cucumber (Chinese Long) v3	cucmedB025
MELO3C035619.2	Cucumber (Chinese Long) v3	cucmedB514
MELO3C035619.2	Watermelon (97103) v2	medwmbB126
MELO3C035619.2	Wax gourd	medwgoB182