MELO3C035618.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C035618.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionMyb/SANT-like DNA-binding domain protein
Locationchr12 : 14080570 .. 14081596 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAGTTCATCGAGAGTACCTAAACATACTTGGACTAAAGTGGAAGAGGCAAGCCTCGTGAAGTTGGTCAATGCTGGTGGGTGGAGGTCCGACAATGGGACCTTTCGCCCCGGGTCCTTAAATCAGCTGGCAAGAATGATGGCCTTTAAGATCCCAGGTTGTAATATCCATGCTTCAACCATCGATAGCCGAATCAAATTGATGAAGAGAATGTTTCATGCACTTGCGGAGATGCGTGGCCCAAACTGTAGTGGTTTTGGGTGGAATGATGAAAAAAATGCATCGTCGCCGAGAAAGAAGTCTTTGATAATTAAGTAAAGGTGCGTTAGTAGTCATTTGAACACTTATACTATTATTTCAATACATGGACTAATAATTTATTATTGCACTTATACAGAGTCATCCGGCGGCGAAAGGCCTCCTTAATAAGTCGTTTGTCCACTATGACGAACTGTCTTACGTGTTTGGCAAAGATCGTGCAACAGGAGGCCGGGTTGAGAGTTTTGCGGACATTGGGTCAAACGATCCTGCTGGGTATGACGCATTTGCTGCTGACGCTGCACCAGATACGAACTTCTCTCCAATGTACAGTCCGAGATTGAACATGTCGCCTGATGATTTGATGGAAACCAGAACCGCTAGGGTCAGTGAACGTAGGAATGTTTCAAGCGGGTCTAAGCAAAAACGTACAGGACATGCCACAGATAGTGGGGACATAGTTCGTACTGCCATCGAGTACGGAAATAAGCAACTTCATCGCATTGCTGAATGGCCTATCCTACAATGTCAAGACGCAACCCAAACACGTCAAGAGATTGTTCGACAGTTGGAGGCCATCCCTGAGCTCACATTGATGGATAGGTGTCACTTAATGCGTATACTTATGCGTAACGTCGATGACATGAAAGCTTTCCTTGAAGTTCCCGACAATATGAAGTACCCGTACTCCAGCATCATTCTTCAAGAAAACCGATGACTAGTTTGGTTGTTGTATTTGTATTAATGAAACTTTTCTTACTTGGAC

mRNA sequence

ATGACAAGTTCATCGAGAGTACCTAAACATACTTGGACTAAAGTGGAAGAGGCAAGCCTCGTGAAGTTGGTCAATGCTGGTGGGTGGAGGTCCGACAATGGGACCTTTCGCCCCGGGTCCTTAAATCAGCTGGCAAGAATGATGGCCTTTAAGATCCCAGGTTGTAATATCCATGCTTCAACCATCGATAGCCGAATCAAATTGATGAAGAGAATGTTTCATGCACTTGCGGAGATGCGTGGCCCAAACTGTAGTGGTTTTGGGTGGAATGATGAAAAAAATGCATCGTCGCCGAGAAAGAAGTCTTTGATAATTAATCATCCGGCGGCGAAAGGCCTCCTTAATAAGTCGTTTGTCCACTATGACGAACTGTCTTACGTGTTTGGCAAAGATCGTGCAACAGGAGGCCGGGTTGAGAGTTTTGCGGACATTGGGTCAAACGATCCTGCTGGGTATGACGCATTTGCTGCTGACGCTGCACCAGATACGAACTTCTCTCCAATGTACAGTCCGAGATTGAACATGTCGCCTGATGATTTGATGGAAACCAGAACCGCTAGGGTCAGTGAACGTAGGAATGTTTCAAGCGGGTCTAAGCAAAAACGTACAGGACATGCCACAGATAGTGGGGACATAGTTCGTACTGCCATCGAGTACGGAAATAAGCAACTTCATCGCATTGCTGAATGGCCTATCCTACAATGTCAAGACGCAACCCAAACACGTCAAGAGATTGTTCGACAGTTGGAGGCCATCCCTGAGCTCACATTGATGGATAGGTGTCACTTAATGCGTATACTTATGCGTAACGTCGATGACATGAAAGCTTTCCTTGAAGTTCCCGACAATATGAAGTACCCGTACTCCAGCATCATTCTTCAAGAAAACCGATGACTAGTTTGGTTGTTGTATTTGTATTAATGAAACTTTTCTTACTTGGAC

Coding sequence (CDS)

ATGACAAGTTCATCGAGAGTACCTAAACATACTTGGACTAAAGTGGAAGAGGCAAGCCTCGTGAAGTTGGTCAATGCTGGTGGGTGGAGGTCCGACAATGGGACCTTTCGCCCCGGGTCCTTAAATCAGCTGGCAAGAATGATGGCCTTTAAGATCCCAGGTTGTAATATCCATGCTTCAACCATCGATAGCCGAATCAAATTGATGAAGAGAATGTTTCATGCACTTGCGGAGATGCGTGGCCCAAACTGTAGTGGTTTTGGGTGGAATGATGAAAAAAATGCATCGTCGCCGAGAAAGAAGTCTTTGATAATTAATCATCCGGCGGCGAAAGGCCTCCTTAATAAGTCGTTTGTCCACTATGACGAACTGTCTTACGTGTTTGGCAAAGATCGTGCAACAGGAGGCCGGGTTGAGAGTTTTGCGGACATTGGGTCAAACGATCCTGCTGGGTATGACGCATTTGCTGCTGACGCTGCACCAGATACGAACTTCTCTCCAATGTACAGTCCGAGATTGAACATGTCGCCTGATGATTTGATGGAAACCAGAACCGCTAGGGTCAGTGAACGTAGGAATGTTTCAAGCGGGTCTAAGCAAAAACGTACAGGACATGCCACAGATAGTGGGGACATAGTTCGTACTGCCATCGAGTACGGAAATAAGCAACTTCATCGCATTGCTGAATGGCCTATCCTACAATGTCAAGACGCAACCCAAACACGTCAAGAGATTGTTCGACAGTTGGAGGCCATCCCTGAGCTCACATTGATGGATAGGTGTCACTTAATGCGTATACTTATGCGTAACGTCGATGACATGAAAGCTTTCCTTGAAGTTCCCGACAATATGAAGTACCCGTACTCCAGCATCATTCTTCAAGAAAACCGATGA

Protein sequence

MTSSSRVPKHTWTKVEEASLVKLVNAGGWRSDNGTFRPGSLNQLARMMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKNASSPRKKSLIINHPAAKGLLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPAGYDAFAADAAPDTNFSPMYSPRLNMSPDDLMETRTARVSERRNVSSGSKQKRTGHATDSGDIVRTAIEYGNKQLHRIAEWPILQCQDATQTRQEIVRQLEAIPELTLMDRCHLMRILMRNVDDMKAFLEVPDNMKYPYSSIILQENR
Homology
[Close]
BLAST of MELO3C035618.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 516.2 bits (1328), Expect = 7.6e-143
Identity = 262/302 (86.75%), Postives = 272/302 (90.07%), Query Frame = 0 

Query: 1   MTSSSRVPKHTWTKVEEAS----LVKLVNAGGWRSDNGTFRPGSLNQLARMMAFKIPGCN 60
           MTSSSR+PKHTWTK EEA     LV+LVNAGGWRSDNGTFRPG LNQLARMMAFKIPG N
Sbjct: 356 MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 415

Query: 61  IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKNASSPRKKSL-IINHPAAKGLLN 120
           IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEK      K+     +HPAAKGLLN
Sbjct: 416 IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWSHPAAKGLLN 475

Query: 121 KSFVHYDELSYVFGKDRATGGRVESFADIGSNDPAGYDAFAADAAPDTNFSPMYSPRLNM 180
           KSFVHYDELSYVFGKDRATGGR ESFADIGSNDP GYDA AADA PDT+F PMYSP LNM
Sbjct: 476 KSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNM 535

Query: 181 SPDDLMETRTARVSERRNVSSGSKQKRTGHATDSGDIVRTAIEYGNKQLHRIAEWPILQC 240
           SPDDLMETRTARVSERRNVSSGSK+KR GHATDSGDIVRTAIEYGN+QLHRIAEWPILQ 
Sbjct: 536 SPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQR 595

Query: 241 QDATQTRQEIVRQLEAIPELTLMDRCHLMRILMRNVDDMKAFLEVPDNMKYPYSSIILQE 298
           QDATQTRQEIVR LEAIPELTLMDRC LMRILMRNVDDMKAFLEVPD+MKYPY S+ILQE
Sbjct: 596 QDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQE 655

[Close]
BLAST of MELO3C035618.2 vs. NCBI nr
Match: XP_008459131.1 (PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo])

HSP 1 Score: 436.0 bits (1120), Expect = 1.0e-118
Identity = 217/245 (88.57%), Postives = 224/245 (91.43%), Query Frame = 0 

Query: 1   MTSSSRVPKHTWTKVEEASLVKLVNAGGWRSDNGTFRPGSLNQLARMMAFKIPGCNIHAS 60
           MTSSSR+PKHTWTK EEASLV+LVNAGGWRSDNGTF PG LNQLARMMAFKIPGCNIHAS
Sbjct: 1   MTSSSRLPKHTWTKEEEASLVELVNAGGWRSDNGTFHPGYLNQLARMMAFKIPGCNIHAS 60

Query: 61  TIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKNASSPRKKSLIINHPAAKGLLNKSFVH 120
           TIDSRIKL+KRMFHALAEMRGPNCSGFGWNDEK      K+S    HPAAKGLLNKSFVH
Sbjct: 61  TIDSRIKLLKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKES----HPAAKGLLNKSFVH 120

Query: 121 YDELSYVFGKDRATGGRVESFADIGSNDPAGYDAFAADAAPDTNFSPMYSPRLNMSPDDL 180
           YDELSYVFGKDRATGGR E FADIGSNDPAGYDAF ADAAPDTNFSPMYSPRLNMSPDDL
Sbjct: 121 YDELSYVFGKDRATGGRAEIFADIGSNDPAGYDAFVADAAPDTNFSPMYSPRLNMSPDDL 180

Query: 181 METRTARVSERRNVSSGSKQKRTGHATDSGDIVRTAIEYGNKQLHRIAEWPILQCQDATQ 240
           METRTARVSERRNVSSGS++K TGHATDSGDIV TAI YGN+QLHRIAEWPILQ QDATQ
Sbjct: 181 METRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRIAEWPILQRQDATQ 240

Query: 241 TRQEI 246
           T QEI
Sbjct: 241 TCQEI 241

[Close]
BLAST of MELO3C035618.2 vs. NCBI nr
Match: XP_008466949.1 (PREDICTED: uncharacterized protein LOC103504332, partial [Cucumis melo])

HSP 1 Score: 324.3 bits (830), Expect = 4.3e-85
Identity = 159/188 (84.57%), Postives = 165/188 (87.77%), Query Frame = 0 

Query: 1   MTSSSRVPKHTWTKVEEASLVKLVNAGGWRSDNGTFRPGSLNQLARMMAFKIPGCNIHAS 60
           MTSSSR+PKHTWTK EEA LV+LVN GGWRSDNGTFRPG LNQLARMMAFKIPG NIHAS
Sbjct: 1   MTSSSRLPKHTWTKEEEAGLVELVNVGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHAS 60

Query: 61  TIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKNASSPRKK---SLIINHPAAKGLLNKS 120
           TIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEK      K+     + +HP AKGLLNKS
Sbjct: 61  TIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWVKSHPTAKGLLNKS 120

Query: 121 FVHYDELSYVFGKDRATGGRVESFADIGSNDPAGYDAFAADAAPDTNFSPMYSPRLNMSP 180
           FVHYDELSYVFGKDRATGGR ESFADIGSNDP GYDAFAADA PDT+F PMYS RLNMSP
Sbjct: 121 FVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAMPDTDFPPMYSLRLNMSP 180

Query: 181 DDLMETRT 186
           DDLMETRT
Sbjct: 181 DDLMETRT 188

[Close]
BLAST of MELO3C035618.2 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo])

HSP 1 Score: 284.3 bits (726), Expect = 4.9e-73
Identity = 150/303 (49.50%), Postives = 206/303 (67.99%), Query Frame = 0 

Query: 1   MTSSSRVPKHTWTKVEEAS----LVKLVNAGGWRSDNGTFRPGSLNQLARMMAFKIPGCN 60
           M S SR PKHTWTK EE      LV+LV++GGWRSDNGTF+PG L QL RMMA K+PG N
Sbjct: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 61  I-HASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKN---ASSPRKKSLIINHPAAKG 120
           I  +STID  +K +K+ +HA+AEMRGP+CSGFGWN+E     A      S I +HPAAKG
Sbjct: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120

Query: 121 LLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPAGY-DAFAADAAPDTNFSPMYSP 180
           LL+KSF +YD+LSYVFGKDRATG R E+F ++GSN    + D      + D +   MYS 
Sbjct: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQ 180

Query: 181 RLNMSPDDLMETRTARVSERRNVSSGSKQKRTGHATDSGDIVRTAIEYGNKQLHRIAEWP 240
            ++MSPD++   R  + SERRN SS SK+KR     ++ +++R+ +E+GN+QL  IA+WP
Sbjct: 181 GVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWP 240

Query: 241 ILQCQDATQTRQEIVRQLEAIPELTLMDRCHLMRILMRNVDDMKAFLEVPDNMKYPYSSI 295
             +     + R ++V+QL+ IP+L   DR  LM+IL R+++ ++ FL +P  +K  Y +I
Sbjct: 241 KEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNI 300

[Close]
BLAST of MELO3C035618.2 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 224.2 bits (570), Expect = 6.0e-55
Identity = 120/280 (42.86%), Postives = 173/280 (61.79%), Query Frame = 0 

Query: 21  VKLVNAGGWRSDNGTFRPGSLNQLARMMAFKIPGCNIHAST-IDSRIKLMKRMFHALAEM 80
           ++LV+ GGW+SDNGTFRPG L QL RMMA K+ GC + A+T ID RIK +KR F A+AEM
Sbjct: 342 MELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKRTFQAIAEM 401

Query: 81  RGPNCSGFGWNDEKNASSPRKK---SLIINHPAAKGLLNKSFVHYDELSYVFGKDRATGG 140
            GP CSGFGWNDE+      K+   + + + PAAKGLLN  F +YDEL+YVFG+DRATG 
Sbjct: 402 LGPACSGFGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYYDELTYVFGRDRATGR 461

Query: 141 RVESFADIGSNDP-AGYDAFAADAAPDTNFSPMYSPRLNMSPDDLMETRTARVSERRNVS 200
             E+FAD+GSN+P  GYD F      + +F P+YS  +++  DD+  +R +         
Sbjct: 462 FAETFADVGSNEPGGGYDRFDMGDG-NEDFPPVYSRGVDILQDDVRASRPSXXXXXXXXX 521

Query: 201 SGSKQKRTGHATDSGDIVRTAIEYGNKQLHRIAEWPILQCQDATQTRQEIVRQLEAIPEL 260
               +KR        + +  A++  N+QL +IAEWP     +    R E  R L  +PEL
Sbjct: 522 XXXXRKRGSQRDFDVEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPEL 581

Query: 261 TLMDRCHLMRILMRNVDDMKAFLEVPDNMKYPYSSIILQE 296
           T +DR  L R L+  +DD++ F+ +P++ +  +  ++L++
Sbjct: 582 TSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRD 620

[Close]
BLAST of MELO3C035618.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 5.0e-143
Identity = 262/302 (86.75%), Postives = 272/302 (90.07%), Query Frame = 0 

Query: 1   MTSSSRVPKHTWTKVEEAS----LVKLVNAGGWRSDNGTFRPGSLNQLARMMAFKIPGCN 60
           MTSSSR+PKHTWTK EEA     LV+LVNAGGWRSDNGTFRPG LNQLARMMAFKIPG N
Sbjct: 356 MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 415

Query: 61  IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKNASSPRKKSL-IINHPAAKGLLN 120
           IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEK      K+     +HPAAKGLLN
Sbjct: 416 IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWSHPAAKGLLN 475

Query: 121 KSFVHYDELSYVFGKDRATGGRVESFADIGSNDPAGYDAFAADAAPDTNFSPMYSPRLNM 180
           KSFVHYDELSYVFGKDRATGGR ESFADIGSNDP GYDA AADA PDT+F PMYSP LNM
Sbjct: 476 KSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNM 535

Query: 181 SPDDLMETRTARVSERRNVSSGSKQKRTGHATDSGDIVRTAIEYGNKQLHRIAEWPILQC 240
           SPDDLMETRTARVSERRNVSSGSK+KR GHATDSGDIVRTAIEYGN+QLHRIAEWPILQ 
Sbjct: 536 SPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQR 595

Query: 241 QDATQTRQEIVRQLEAIPELTLMDRCHLMRILMRNVDDMKAFLEVPDNMKYPYSSIILQE 298
           QDATQTRQEIVR LEAIPELTLMDRC LMRILMRNVDDMKAFLEVPD+MKYPY S+ILQE
Sbjct: 596 QDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQE 655

[Close]
BLAST of MELO3C035618.2 vs. TrEMBL
Match: tr|A0A1S3C8Z4|A0A1S3C8Z4_CUCME (uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 6.6e-119
Identity = 217/245 (88.57%), Postives = 224/245 (91.43%), Query Frame = 0 

Query: 1   MTSSSRVPKHTWTKVEEASLVKLVNAGGWRSDNGTFRPGSLNQLARMMAFKIPGCNIHAS 60
           MTSSSR+PKHTWTK EEASLV+LVNAGGWRSDNGTF PG LNQLARMMAFKIPGCNIHAS
Sbjct: 1   MTSSSRLPKHTWTKEEEASLVELVNAGGWRSDNGTFHPGYLNQLARMMAFKIPGCNIHAS 60

Query: 61  TIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKNASSPRKKSLIINHPAAKGLLNKSFVH 120
           TIDSRIKL+KRMFHALAEMRGPNCSGFGWNDEK      K+S    HPAAKGLLNKSFVH
Sbjct: 61  TIDSRIKLLKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKES----HPAAKGLLNKSFVH 120

Query: 121 YDELSYVFGKDRATGGRVESFADIGSNDPAGYDAFAADAAPDTNFSPMYSPRLNMSPDDL 180
           YDELSYVFGKDRATGGR E FADIGSNDPAGYDAF ADAAPDTNFSPMYSPRLNMSPDDL
Sbjct: 121 YDELSYVFGKDRATGGRAEIFADIGSNDPAGYDAFVADAAPDTNFSPMYSPRLNMSPDDL 180

Query: 181 METRTARVSERRNVSSGSKQKRTGHATDSGDIVRTAIEYGNKQLHRIAEWPILQCQDATQ 240
           METRTARVSERRNVSSGS++K TGHATDSGDIV TAI YGN+QLHRIAEWPILQ QDATQ
Sbjct: 181 METRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRIAEWPILQRQDATQ 240

Query: 241 TRQEI 246
           T QEI
Sbjct: 241 TCQEI 241

[Close]
BLAST of MELO3C035618.2 vs. TrEMBL
Match: tr|A0A1S3CTN6|A0A1S3CTN6_CUCME (uncharacterized protein LOC103504332 OS=Cucumis melo OX=3656 GN=LOC103504332 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 2.8e-85
Identity = 159/188 (84.57%), Postives = 165/188 (87.77%), Query Frame = 0 

Query: 1   MTSSSRVPKHTWTKVEEASLVKLVNAGGWRSDNGTFRPGSLNQLARMMAFKIPGCNIHAS 60
           MTSSSR+PKHTWTK EEA LV+LVN GGWRSDNGTFRPG LNQLARMMAFKIPG NIHAS
Sbjct: 1   MTSSSRLPKHTWTKEEEAGLVELVNVGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHAS 60

Query: 61  TIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKNASSPRKK---SLIINHPAAKGLLNKS 120
           TIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEK      K+     + +HP AKGLLNKS
Sbjct: 61  TIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWVKSHPTAKGLLNKS 120

Query: 121 FVHYDELSYVFGKDRATGGRVESFADIGSNDPAGYDAFAADAAPDTNFSPMYSPRLNMSP 180
           FVHYDELSYVFGKDRATGGR ESFADIGSNDP GYDAFAADA PDT+F PMYS RLNMSP
Sbjct: 121 FVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAMPDTDFPPMYSLRLNMSP 180

Query: 181 DDLMETRT 186
           DDLMETRT
Sbjct: 181 DDLMETRT 188

[Close]
BLAST of MELO3C035618.2 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.2e-73
Identity = 150/303 (49.50%), Postives = 206/303 (67.99%), Query Frame = 0 

Query: 1   MTSSSRVPKHTWTKVEEAS----LVKLVNAGGWRSDNGTFRPGSLNQLARMMAFKIPGCN 60
           M S SR PKHTWTK EE      LV+LV++GGWRSDNGTF+PG L QL RMMA K+PG N
Sbjct: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 61  I-HASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKN---ASSPRKKSLIINHPAAKG 120
           I  +STID  +K +K+ +HA+AEMRGP+CSGFGWN+E     A      S I +HPAAKG
Sbjct: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120

Query: 121 LLNKSFVHYDELSYVFGKDRATGGRVESFADIGSNDPAGY-DAFAADAAPDTNFSPMYSP 180
           LL+KSF +YD+LSYVFGKDRATG R E+F ++GSN    + D      + D +   MYS 
Sbjct: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQ 180

Query: 181 RLNMSPDDLMETRTARVSERRNVSSGSKQKRTGHATDSGDIVRTAIEYGNKQLHRIAEWP 240
            ++MSPD++   R  + SERRN SS SK+KR     ++ +++R+ +E+GN+QL  IA+WP
Sbjct: 181 GVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWP 240

Query: 241 ILQCQDATQTRQEIVRQLEAIPELTLMDRCHLMRILMRNVDDMKAFLEVPDNMKYPYSSI 295
             +     + R ++V+QL+ IP+L   DR  LM+IL R+++ ++ FL +P  +K  Y +I
Sbjct: 241 KEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNI 300

[Close]
BLAST of MELO3C035618.2 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 4.0e-55
Identity = 120/280 (42.86%), Postives = 173/280 (61.79%), Query Frame = 0 

Query: 21  VKLVNAGGWRSDNGTFRPGSLNQLARMMAFKIPGCNIHAST-IDSRIKLMKRMFHALAEM 80
           ++LV+ GGW+SDNGTFRPG L QL RMMA K+ GC + A+T ID RIK +KR F A+AEM
Sbjct: 342 MELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKRTFQAIAEM 401

Query: 81  RGPNCSGFGWNDEKNASSPRKK---SLIINHPAAKGLLNKSFVHYDELSYVFGKDRATGG 140
            GP CSGFGWNDE+      K+   + + + PAAKGLLN  F +YDEL+YVFG+DRATG 
Sbjct: 402 LGPACSGFGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYYDELTYVFGRDRATGR 461

Query: 141 RVESFADIGSNDP-AGYDAFAADAAPDTNFSPMYSPRLNMSPDDLMETRTARVSERRNVS 200
             E+FAD+GSN+P  GYD F      + +F P+YS  +++  DD+  +R +         
Sbjct: 462 FAETFADVGSNEPGGGYDRFDMGDG-NEDFPPVYSRGVDILQDDVRASRPSXXXXXXXXX 521

Query: 201 SGSKQKRTGHATDSGDIVRTAIEYGNKQLHRIAEWPILQCQDATQTRQEIVRQLEAIPEL 260
               +KR        + +  A++  N+QL +IAEWP     +    R E  R L  +PEL
Sbjct: 522 XXXXRKRGSQRDFDVEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPEL 581

Query: 261 TLMDRCHLMRILMRNVDDMKAFLEVPDNMKYPYSSIILQE 296
           T +DR  L R L+  +DD++ F+ +P++ +  +  ++L++
Sbjct: 582 TSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRD 620

The following BLAST results are available for this feature:
BLAST of MELO3C035618.2 vs. NCBI nr
Match NameE-valueIdentityDescription
ADN34114.17.6e-14386.75retrotransposon protein [Cucumis melo subsp. melo][more]
XP_008459131.11.0e-11888.57PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo][more]
XP_008466949.14.3e-8584.57PREDICTED: uncharacterized protein LOC103504332, partial [Cucumis melo][more]
XP_008441954.14.9e-7349.50PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo][more]
ADN33754.16.0e-5542.86retrotransposon protein [Cucumis melo subsp. melo][more]
BLAST of MELO3C035618.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C035618.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C035618.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|E5GCB5|E5GCB5_CUCME5.0e-14386.75Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S3C8Z4|A0A1S3C8Z4_CUCME6.6e-11988.57uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=... [more]
tr|A0A1S3CTN6|A0A1S3CTN6_CUCME2.8e-8584.57uncharacterized protein LOC103504332 OS=Cucumis melo OX=3656 GN=LOC103504332 PE=... [more]
tr|A0A1S3B4L3|A0A1S3B4L3_CUCME3.2e-7349.50uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=... [more]
tr|E5GBB2|E5GBB2_CUCME4.0e-5542.86Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035618.2.1MELO3C035618.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..208
NoneNo IPR availablePANTHERPTHR31704:SF62SUBFAMILY NOT NAMEDcoord: 9..192
NoneNo IPR availablePANTHERPTHR31704FAMILY NOT NAMEDcoord: 9..192

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C035618.2Silver-seed gourdcarmedB1017
MELO3C035618.2Cucumber (Chinese Long) v3cucmedB025
MELO3C035618.2Cucumber (Chinese Long) v3cucmedB514
MELO3C035618.2Watermelon (97103) v2medwmbB126
MELO3C035618.2Wax gourdmedwgoB182
MELO3C035618.2Cucumber (Gy14) v2cgybmedB022
MELO3C035618.2Cucurbita maxima (Rimu)cmamedB216
MELO3C035618.2Cucumber (Gy14) v1cgymedB320
MELO3C035618.2Cucurbita maxima (Rimu)cmamedB414
MELO3C035618.2Cucurbita moschata (Rifu)cmomedB204
MELO3C035618.2Cucurbita moschata (Rifu)cmomedB410
MELO3C035618.2Cucurbita pepo (Zucchini)cpemedB035
MELO3C035618.2Cucurbita pepo (Zucchini)cpemedB564
MELO3C035618.2Wild cucumber (PI 183967)cpimedB025
MELO3C035618.2Cucumber (Chinese Long) v2cumedB024
MELO3C035618.2Bottle gourd (USVL1VR-Ls)lsimedB184
MELO3C035618.2Watermelon (Charleston Gray)medwcgB126
MELO3C035618.2Watermelon (97103) v1medwmB154
MELO3C035618.2Silver-seed gourdcarmedB0051