MELO3C035609.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C035609.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionL10-interacting MYB domain-containing protein-like
Locationchr12 : 13515518 .. 13515910 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTTGTCAGCAATACAAACTTTGGTGTTCAAGAAAATGATAAAGAAAAAGGTAAAAAATAAGTTCAAAGAAAGAAAAGCAAATTTGCCAAAAAACAATTCTACATTCATAGATGTATATGCTGAGAACGCAAAGAGAAAAAATGACATCCTTGAGAAAAGGTCTTTTGATTGTAAATCTAGTCAAATTGATGAGAGCCAAACATCAAGCAAAAAAGATGATTTCGATGAAGAGTTGATGGAATGTTTCAACATTTTAAATACAATGGAGGATGTTGATGGAGAAGCTTATTCCAAAATACTTAAACTCTTGCACGGAGATCTTGCTTGGAGAAAACTATTTTTTCACTTGTCCAATTCAAGGAAGAGAGATTTCATAAATAGTCTCTAG

mRNA sequence

ATGATGTTGTCAGCAATACAAACTTTGGTGTTCAAGAAAATGATAAAGAAAAAGGTAAAAAATAAGTTCAAAGAAAGAAAAGCAAATTTGCCAAAAAACAATTCTACATTCATAGATGTATATGCTGAGAACGCAAAGAGAAAAAATGACATCCTTGAGAAAAGGTCTTTTGATTGTAAATCTAGTCAAATTGATGAGAGCCAAACATCAAGCAAAAAAGATGATTTCGATGAAGAGTTGATGGAATGTTTCAACATTTTAAATACAATGGAGGATGTTGATGGAGAAGCTTATTCCAAAATACTTAAACTCTTGCACGGAGATCTTGCTTGGAGAAAACTATTTTTTCACTTGTCCAATTCAAGGAAGAGAGATTTCATAAATAGTCTCTAG

Coding sequence (CDS)

ATGATGTTGTCAGCAATACAAACTTTGGTGTTCAAGAAAATGATAAAGAAAAAGGTAAAAAATAAGTTCAAAGAAAGAAAAGCAAATTTGCCAAAAAACAATTCTACATTCATAGATGTATATGCTGAGAACGCAAAGAGAAAAAATGACATCCTTGAGAAAAGGTCTTTTGATTGTAAATCTAGTCAAATTGATGAGAGCCAAACATCAAGCAAAAAAGATGATTTCGATGAAGAGTTGATGGAATGTTTCAACATTTTAAATACAATGGAGGATGTTGATGGAGAAGCTTATTCCAAAATACTTAAACTCTTGCACGGAGATCTTGCTTGGAGAAAACTATTTTTTCACTTGTCCAATTCAAGGAAGAGAGATTTCATAAATAGTCTCTAG

Protein sequence

MMLSAIQTLVFKKMIKKKVKNKFKERKANLPKNNSTFIDVYAENAKRKNDILEKRSFDCKSSQIDESQTSSKKDDFDEELMECFNILNTMEDVDGEAYSKILKLLHGDLAWRKLFFHLSNSRKRDFINSL
Homology
[Close]
BLAST of MELO3C035609.2 vs. NCBI nr
Match: XP_008461742.1 (PREDICTED: L10-interacting MYB domain-containing protein-like [Cucumis melo])

HSP 1 Score: 141.0 bits (354), Expect = 2.9e-30
Identity = 75/116 (64.66%), Postives = 88/116 (75.86%), Query Frame = 0 

Query: 16  KKKVKNKFKERKANLPKNNSTFIDVYAENAKRKNDILEKRSFDCKSSQIDESQTSSKK-D 75
           K K K + +  +       S F+++YAENA R NDILEKRSF C SS++DESQTSSKK D
Sbjct: 130 KGKSKKRVRRNRDEFDSFFSPFLNIYAENAMRNNDILEKRSFGCTSSEVDESQTSSKKDD 189

Query: 76  DFDEELMECFNILNTMEDVDGEAYSKILKLLHGDLAWRKLFFHLSNSRKRDFINSL 131
           D  EELMEC +IL+TMEDVDG+ YSKILKLLH DL WRKLF  + +SRKRDFINSL
Sbjct: 190 DLHEELMECLDILHTMEDVDGDTYSKILKLLHRDLDWRKLFLRMPDSRKRDFINSL 245

[Close]
BLAST of MELO3C035609.2 vs. NCBI nr
Match: XP_008443406.1 (PREDICTED: uncharacterized protein LOC103487000 isoform X1 [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 2.9e-14
Identity = 50/116 (43.10%), Postives = 72/116 (62.07%), Query Frame = 0 

Query: 16  KKKVKNKFKERKANLPKNNSTFIDVYAENAKRKNDILEKRSFDCKSSQIDESQTSSKKDD 75
           +  +  K K ++  +    S+F + Y EN KR+NDILE R F   S +   S+TSSK  D
Sbjct: 214 QSSMSKKSKRKREIINDIMSSFKEAYVENLKRRNDILEGRLFGLSSGEF--SETSSKARD 273

Query: 76  F-DEELMECFNILNTMEDVDGEAYSKILKLLHGDLAWRKLFFHLSNSRKRDFINSL 131
           + DE+L +C  ILN+M D+D +AY+K+LK L  D  WRK F  +  SR+R F+N+L
Sbjct: 274 YADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNNL 327

[Close]
BLAST of MELO3C035609.2 vs. NCBI nr
Match: XP_016899632.1 (PREDICTED: L10-interacting MYB domain-containing protein-like isoform X2 [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 2.9e-14
Identity = 50/116 (43.10%), Postives = 72/116 (62.07%), Query Frame = 0 

Query: 16  KKKVKNKFKERKANLPKNNSTFIDVYAENAKRKNDILEKRSFDCKSSQIDESQTSSKKDD 75
           +  +  K K ++  +    S+F + Y EN KR+NDILE R F   S +   S+TSSK  D
Sbjct: 188 QSSMSKKSKRKREIINDIMSSFKEAYVENLKRRNDILEGRLFGLSSGEF--SETSSKARD 247

Query: 76  F-DEELMECFNILNTMEDVDGEAYSKILKLLHGDLAWRKLFFHLSNSRKRDFINSL 131
           + DE+L +C  ILN+M D+D +AY+K+LK L  D  WRK F  +  SR+R F+N+L
Sbjct: 248 YADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNNL 301

[Close]
BLAST of MELO3C035609.2 vs. NCBI nr
Match: XP_004147495.1 (PREDICTED: uncharacterized protein LOC101212009 isoform X1 [Cucumis sativus])

HSP 1 Score: 86.3 bits (212), Expect = 8.5e-14
Identity = 50/116 (43.10%), Postives = 72/116 (62.07%), Query Frame = 0 

Query: 16  KKKVKNKFKERKANLPKNNSTFIDVYAENAKRKNDILEKRSFDCKSSQIDESQTSSKKDD 75
           +  +  K K ++  L    S+F + Y EN KR+NDILE R F   S +   S+ SSK+ D
Sbjct: 214 QSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLFGFPSGEF--SEISSKERD 273

Query: 76  F-DEELMECFNILNTMEDVDGEAYSKILKLLHGDLAWRKLFFHLSNSRKRDFINSL 131
           + DE+L +C  ILN+M D+D +AY+K+LK L  D  WRK F  +  SR+R F+N+L
Sbjct: 274 YADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNNL 327

[Close]
BLAST of MELO3C035609.2 vs. NCBI nr
Match: KGN59566.1 (hypothetical protein Csa_3G825110 [Cucumis sativus])

HSP 1 Score: 86.3 bits (212), Expect = 8.5e-14
Identity = 50/116 (43.10%), Postives = 72/116 (62.07%), Query Frame = 0 

Query: 16  KKKVKNKFKERKANLPKNNSTFIDVYAENAKRKNDILEKRSFDCKSSQIDESQTSSKKDD 75
           +  +  K K ++  L    S+F + Y EN KR+NDILE R F   S +   S+ SSK+ D
Sbjct: 16  QSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLFGFPSGEF--SEISSKERD 75

Query: 76  F-DEELMECFNILNTMEDVDGEAYSKILKLLHGDLAWRKLFFHLSNSRKRDFINSL 131
           + DE+L +C  ILN+M D+D +AY+K+LK L  D  WRK F  +  SR+R F+N+L
Sbjct: 76  YADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNNL 129

[Close]
BLAST of MELO3C035609.2 vs. TrEMBL
Match: tr|A0A1S3CFA7|A0A1S3CFA7_CUCME (L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LOC103500275 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.9e-30
Identity = 75/116 (64.66%), Postives = 88/116 (75.86%), Query Frame = 0 

Query: 16  KKKVKNKFKERKANLPKNNSTFIDVYAENAKRKNDILEKRSFDCKSSQIDESQTSSKK-D 75
           K K K + +  +       S F+++YAENA R NDILEKRSF C SS++DESQTSSKK D
Sbjct: 130 KGKSKKRVRRNRDEFDSFFSPFLNIYAENAMRNNDILEKRSFGCTSSEVDESQTSSKKDD 189

Query: 76  DFDEELMECFNILNTMEDVDGEAYSKILKLLHGDLAWRKLFFHLSNSRKRDFINSL 131
           D  EELMEC +IL+TMEDVDG+ YSKILKLLH DL WRKLF  + +SRKRDFINSL
Sbjct: 190 DLHEELMECLDILHTMEDVDGDTYSKILKLLHRDLDWRKLFLRMPDSRKRDFINSL 245

[Close]
BLAST of MELO3C035609.2 vs. TrEMBL
Match: tr|A0A1S4DUG7|A0A1S4DUG7_CUCME (L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487000 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.9e-14
Identity = 50/116 (43.10%), Postives = 72/116 (62.07%), Query Frame = 0 

Query: 16  KKKVKNKFKERKANLPKNNSTFIDVYAENAKRKNDILEKRSFDCKSSQIDESQTSSKKDD 75
           +  +  K K ++  +    S+F + Y EN KR+NDILE R F   S +   S+TSSK  D
Sbjct: 188 QSSMSKKSKRKREIINDIMSSFKEAYVENLKRRNDILEGRLFGLSSGEF--SETSSKARD 247

Query: 76  F-DEELMECFNILNTMEDVDGEAYSKILKLLHGDLAWRKLFFHLSNSRKRDFINSL 131
           + DE+L +C  ILN+M D+D +AY+K+LK L  D  WRK F  +  SR+R F+N+L
Sbjct: 248 YADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNNL 301

[Close]
BLAST of MELO3C035609.2 vs. TrEMBL
Match: tr|A0A1S3B8P1|A0A1S3B8P1_CUCME (uncharacterized protein LOC103487000 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487000 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.9e-14
Identity = 50/116 (43.10%), Postives = 72/116 (62.07%), Query Frame = 0 

Query: 16  KKKVKNKFKERKANLPKNNSTFIDVYAENAKRKNDILEKRSFDCKSSQIDESQTSSKKDD 75
           +  +  K K ++  +    S+F + Y EN KR+NDILE R F   S +   S+TSSK  D
Sbjct: 214 QSSMSKKSKRKREIINDIMSSFKEAYVENLKRRNDILEGRLFGLSSGEF--SETSSKARD 273

Query: 76  F-DEELMECFNILNTMEDVDGEAYSKILKLLHGDLAWRKLFFHLSNSRKRDFINSL 131
           + DE+L +C  ILN+M D+D +AY+K+LK L  D  WRK F  +  SR+R F+N+L
Sbjct: 274 YADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNNL 327

[Close]
BLAST of MELO3C035609.2 vs. TrEMBL
Match: tr|A0A0A0LHR1|A0A0A0LHR1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G825110 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.6e-14
Identity = 50/116 (43.10%), Postives = 72/116 (62.07%), Query Frame = 0 

Query: 16  KKKVKNKFKERKANLPKNNSTFIDVYAENAKRKNDILEKRSFDCKSSQIDESQTSSKKDD 75
           +  +  K K ++  L    S+F + Y EN KR+NDILE R F   S +   S+ SSK+ D
Sbjct: 16  QSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLFGFPSGEF--SEISSKERD 75

Query: 76  F-DEELMECFNILNTMEDVDGEAYSKILKLLHGDLAWRKLFFHLSNSRKRDFINSL 131
           + DE+L +C  ILN+M D+D +AY+K+LK L  D  WRK F  +  SR+R F+N+L
Sbjct: 76  YADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNNL 129

[Close]
BLAST of MELO3C035609.2 vs. TrEMBL
Match: tr|A0A2P6SF64|A0A2P6SF64_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0346821 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.2e-11
Identity = 42/105 (40.00%), Postives = 70/105 (66.67%), Query Frame = 0 

Query: 27  KANLPKNNSTFIDVYAENAKRKNDILEKRSFDCKSSQ-IDESQTSSKKDDFDEELMECFN 86
           K++  +  S+F +V+ E++K++++I E+R  D    +  DE Q+ SK+   +E LM+CF 
Sbjct: 334 KSSGKRKLSSFTNVHGESSKKRHEIAEQRFTDSAPLRGNDEVQSVSKEVSDEEYLMQCFG 393

Query: 87  ILNTMEDVDGEAYSKILKLLHGDLAWRKLFFHLSNSRKRDFINSL 131
           ILN M+++D ++YSK LKL  GD  WRKLF  +   R+++FI +L
Sbjct: 394 ILNKMDEIDDDSYSKALKLFRGDATWRKLFVGMPEKRRKNFILNL 438

The following BLAST results are available for this feature:
BLAST of MELO3C035609.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008461742.12.9e-3064.66PREDICTED: L10-interacting MYB domain-containing protein-like [Cucumis melo][more]
XP_008443406.12.9e-1443.10PREDICTED: uncharacterized protein LOC103487000 isoform X1 [Cucumis melo][more]
XP_016899632.12.9e-1443.10PREDICTED: L10-interacting MYB domain-containing protein-like isoform X2 [Cucumi... [more]
XP_004147495.18.5e-1443.10PREDICTED: uncharacterized protein LOC101212009 isoform X1 [Cucumis sativus][more]
KGN59566.18.5e-1443.10hypothetical protein Csa_3G825110 [Cucumis sativus][more]
BLAST of MELO3C035609.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C035609.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C035609.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CFA7|A0A1S3CFA7_CUCME1.9e-3064.66L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LO... [more]
tr|A0A1S4DUG7|A0A1S4DUG7_CUCME1.9e-1443.10L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo OX... [more]
tr|A0A1S3B8P1|A0A1S3B8P1_CUCME1.9e-1443.10uncharacterized protein LOC103487000 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0LHR1|A0A0A0LHR1_CUCSA5.6e-1443.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G825110 PE=4 SV=1[more]
tr|A0A2P6SF64|A0A2P6SF64_ROSCH1.2e-1140.00Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0346821 PE=4... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035609.2.1MELO3C035609.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C035609.2Watermelon (97103) v2medwmbB126
MELO3C035609.2Cucumber (Gy14) v2cgybmedB022
MELO3C035609.2Cucurbita maxima (Rimu)cmamedB216
MELO3C035609.2Cucurbita maxima (Rimu)cmamedB414
MELO3C035609.2Cucurbita pepo (Zucchini)cpemedB033
MELO3C035609.2Cucurbita pepo (Zucchini)cpemedB564
MELO3C035609.2Wild cucumber (PI 183967)cpimedB025
MELO3C035609.2Cucumber (Chinese Long) v2cumedB024
MELO3C035609.2Bottle gourd (USVL1VR-Ls)lsimedB184
MELO3C035609.2Watermelon (Charleston Gray)medwcgB126
MELO3C035609.2Watermelon (97103) v1medwmB154
MELO3C035609.2Cucumber (Chinese Long) v3cucmedB025