MELO3C035600.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C035600.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr12 : 12757263 .. 12760296 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAGTTCTTTGATGAATATGTATGCGAAATGTGATCAGTTTGTTGATGCCATTAAGCTTTTCGATGAATTTCCTCAGAGAGATGTGGGGTGTTGGAATGCAGTTATCTCTTGTTATTTTAAAGATGGTAAGGCTGAGACTGCGTTGAAGATGTTTGATAAAATGAAAGAGTTGGGTTTTGAGCCTAATTCTCTAACTTTTACTGTTGTTGTCTCATCTTGTACTAGGCTTTTGAATTTGAAAAGAGGTAAGGAGATTCATAGGGAGTTGATAGATAGATGGATTTTCACTAATATGCACAATAATAATCTTTATGGAAGTTTTTGGCTCACATTTTTTGTTCCCTAATCCATTAGCATAATGCTTGTAATTTTGTCCCGATGATGAACATTTCAATGATTGTACCTATTTATTGATACTTTTAAATATAATAACATGTTTCTTGCTCCATTCTCTTTCTTTTCTGCAGAGGGGCTTTAAACAGCAATGGTTGTCTATTACGTTCTCAAAGGCTATTTTTCTTGGCAATGGTCTTGTTGCAATTCTTACTGGGTTGTTTGGGAATGTACTAGTTGATAGTCTGTCTCTTGGACCGGTGGCACCTTTTGATGTTGCTGCATGCTTTCTTGCCATTGGTATGACCATCATTATGACATCATGGACCGAGAACTATAGGGATCCATAGGAGAGAGGATTTGCTCACCCAGTTTAGCGTGGCTGCTGTTGCCATTGCACTTGGTATTCTCTTAGATTTTCATGCTTATATATTTTTTTTCATTTGATTACATTTCCTGAAAGCCTAAAGTCTTAGCAAGAGTTTTAGTTTCCCCCACCATAAATACTTCAATAAAGAAATCTTATAAATTTGCCACGACCAAATTAAACTAATTCTAAAAAAATATAGTAATCAAATGAATTTGTAATGTAAACACATGCTTTCTGTCAATTGATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCAATTGATTTGATTACATTATTCTGTATATTGTGTAGTGTACATTACAAATATTTCCACGACCCATTGTATAATGTGCAGTTTACATTACAAATTCATTTGATTACATTATTTTGTTAATTGATTTTCCCCCTTTCTTCTTTTTTCCTTAGAAAGATAAATATCTGAACGTTGATTGATATTCTTTAAGATATGCCAACTCATTTTAAATTTTCTTTGGGTCAGATGAGAAGATCGCACTGCTAGGTGCAATACAGTCTATTTGAAGGTTCAATGTATTGCAGGCTTCGTGAATTGAAAAAACAGCTTGGTGATTACTTTTGTATGTTTATTCATTTTTGTGAATGATGTTCCGTATTTGTTAATCCTTAAATTTGAGGGTGCTACATTCACAAATATGTATATGTATTTAGTAGGTGTGCATATGATACTATCAGGCTAGCTATTTGAAATCAGAAATTGATGTTTAGTCAAATATTGTTAGGAATGTCCTGATTATAATCAGAGTTTTAAGTTTAGTAAATTGGTATTATTGATGGAAGCTTGTGCTTCACTTGTTGTTTGATTTGGAGTTTTTGGACTATACATTGACATGTTTATGACAATTACATTATGAACTTGTTGATCACAATTATATTATGAACAATTATATTATGTCTTACTTTTTCTAATCTATTTTACTTCTTATTGGGATATTGTTGGTTTGTTTTCACTTCTTTATTTGTTTCTTCCTTCTAATTTATCTAACTTTACTGATAGTTGTTCAAAAGAGGTTTGCCACATAGTAGTAGGCATTCTATAGCTAGTGTGCAAGCAAATTTTTTTATATATTTTTCACAATATACAATGACGAACATTTAATGTCGGTTTTAAACTGACATTAAAAGCTAGATTTCTTGTAGTGTAAAAACTATAAAAAATAATACCCCTTATTCTTGACACTGAATTAGTTGACGCATAAAAACTATCAAGTAAACCTTCCTTATTCTTGACACTGGATTACTTGACGCATTGAAAAGCGTCAAGTAAACCCAGTTTTATAGTAGTGAGCGTTTGTGGCTGGTTGGGAACCACCAATGATTATTGTAGATGGTGTTTCTGTTCCCAAATCTGAAGTTGACTGGACTGATACTGAAGAACAAGCCTTTATGGTTAATGCTAGAGCTCTTAATGATATCTTTAATGGCGTTGACTTAAATGTCTTTATGTTAATCAACTCTTGTAGTTCTGCCAAAGAAGCATGGAAAATCTTAGAGGTTGCGTATGAGGGCATTACAAAAGTTAAAATATCTAGATTACAGTTGGTAACCTCAAAATTTGAAGCCTTAAAGATGTTTGAAGACGAGTCTGTAGCTAAACATAATGACAAAGTTCAGGAAATAGCCAATGAGTCATTCAACCTTGGAGAGAAGATACCTGAATCCAAGATTGTGCGAAAAATGCTGCATTCTCTGTTTGAAAAATTTGACATGAAGGTTATGGCTATAGAAGAAGCACGTAATAACTAA

mRNA sequence

ATGGGGAGTTCTTTGATGAATATGTATGCGAAATGTGATCAGTTTGTTGATGCCATTAAGCTTTTCGATGAATTTCCTCAGAGAGATGTGGGGTGTTGGAATGCAGTTATCTCTTGTTATTTTAAAGATGGTAAGGCTGAGACTGCGTTGAAGATGTTTGATAAAATGAAAGAGTTGGGTTTTGAGCCTAATTCTCTAACTTTTACTAGGGGCTTTAAACAGCAATGGTTGTCTATTACGTTCTCAAAGGCTATTTTTCTTGGCAATGGTCTTGTTGCAATTCTTACTGGGTTGTTTGGGAATGTACTAGTTGATAGTCTGTCTCTTGGACCGGTGGCACCTTTTGATGTTGCTGCATGCTTTCTTGCCATTGATGGTGTTTCTGTTCCCAAATCTGAAGTTGACTGGACTGATACTGAAGAACAAGCCTTTATGGTTAATGCTAGAGCTCTTAATGATATCTTTAATGGCGTTGACTTAAATGTCTTTATGTTAATCAACTCTTGTAGTTCTGCCAAAGAAGCATGGAAAATCTTAGAGGTTGCGTATGAGGGCATTACAAAAGTTAAAATATCTAGATTACAGTTGGTAACCTCAAAATTTGAAGCCTTAAAGATGTTTGAAGACGAGTCTGTAGCTAAACATAATGACAAAGTTCAGGAAATAGCCAATGAGTCATTCAACCTTGGAGAGAAGATACCTGAATCCAAGATTGTGCGAAAAATGCTGCATTCTCTGTTTGAAAAATTTGACATGAAGGTTATGGCTATAGAAGAAGCACGTAATAACTAA

Coding sequence (CDS)

ATGGGGAGTTCTTTGATGAATATGTATGCGAAATGTGATCAGTTTGTTGATGCCATTAAGCTTTTCGATGAATTTCCTCAGAGAGATGTGGGGTGTTGGAATGCAGTTATCTCTTGTTATTTTAAAGATGGTAAGGCTGAGACTGCGTTGAAGATGTTTGATAAAATGAAAGAGTTGGGTTTTGAGCCTAATTCTCTAACTTTTACTAGGGGCTTTAAACAGCAATGGTTGTCTATTACGTTCTCAAAGGCTATTTTTCTTGGCAATGGTCTTGTTGCAATTCTTACTGGGTTGTTTGGGAATGTACTAGTTGATAGTCTGTCTCTTGGACCGGTGGCACCTTTTGATGTTGCTGCATGCTTTCTTGCCATTGATGGTGTTTCTGTTCCCAAATCTGAAGTTGACTGGACTGATACTGAAGAACAAGCCTTTATGGTTAATGCTAGAGCTCTTAATGATATCTTTAATGGCGTTGACTTAAATGTCTTTATGTTAATCAACTCTTGTAGTTCTGCCAAAGAAGCATGGAAAATCTTAGAGGTTGCGTATGAGGGCATTACAAAAGTTAAAATATCTAGATTACAGTTGGTAACCTCAAAATTTGAAGCCTTAAAGATGTTTGAAGACGAGTCTGTAGCTAAACATAATGACAAAGTTCAGGAAATAGCCAATGAGTCATTCAACCTTGGAGAGAAGATACCTGAATCCAAGATTGTGCGAAAAATGCTGCATTCTCTGTTTGAAAAATTTGACATGAAGGTTATGGCTATAGAAGAAGCACGTAATAACTAA

Protein sequence

MGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAETALKMFDKMKELGFEPNSLTFTRGFKQQWLSITFSKAIFLGNGLVAILTGLFGNVLVDSLSLGPVAPFDVAACFLAIDGVSVPKSEVDWTDTEEQAFMVNARALNDIFNGVDLNVFMLINSCSSAKEAWKILEVAYEGITKVKISRLQLVTSKFEALKMFEDESVAKHNDKVQEIANESFNLGEKIPESKIVRKMLHSLFEKFDMKVMAIEEARNN
Homology
[Close]
BLAST of MELO3C035600.2 vs. NCBI nr
Match: XP_016903608.1 (PREDICTED: uncharacterized protein LOC107992254 [Cucumis melo])

HSP 1 Score: 194.1 bits (492), Expect = 5.9e-46
Identity = 99/141 (70.21%), Postives = 122/141 (86.52%), Query Frame = 0 

Query: 122 LAIDGVSVPKSEVDWTDTEEQAFMVNARALNDIFNGVDLNVFMLINSCSSAKEAWKILEV 181
           + ++GVSVPK E+DWTD EE+A + NARA+N +FNGVDLN+F LINS ++AKEAWKILEV
Sbjct: 25  ITVNGVSVPKPEIDWTDAEEKASVGNARAINAMFNGVDLNIFKLINSYTTAKEAWKILEV 84

Query: 182 AYEGITKVKISRLQLVTSKFEALKMFEDESVAKHNDKVQEIANESFNLGEKIPESKIVRK 241
           AYEG +KVKISRLQL+TSKFEALKM EDE+V+++N++V EIAN+S  L EKIPESKIV K
Sbjct: 85  AYEGTSKVKISRLQLITSKFEALKMTEDETVSEYNERVLEIANDSLLLAEKIPESKIVCK 144

Query: 242 MLHSLFEKFDMKVMAIEEARN 263
           +L SL  KFDMKV AIEEA++
Sbjct: 145 VLRSLPRKFDMKVTAIEEAQD 165

[Close]
BLAST of MELO3C035600.2 vs. NCBI nr
Match: XP_016900834.1 (PREDICTED: uncharacterized protein LOC107991049 [Cucumis melo])

HSP 1 Score: 184.1 bits (466), Expect = 6.1e-43
Identity = 95/125 (76.00%), Postives = 108/125 (86.40%), Query Frame = 0 

Query: 122 LAIDGVSVPKSEVDWTDTEEQAFMVNARALNDIFNGVDLNVFMLINSCSSAKEAWKILEV 181
           + IDG  VPKSEVDWTD EEQA + N+ A+N IFNGVDLNVF LINSCSS K+AWKILEV
Sbjct: 51  ITIDGHCVPKSEVDWTDVEEQASVRNSTAINTIFNGVDLNVFKLINSCSSVKKAWKILEV 110

Query: 182 AYEGITKVKISRLQLVTSKFEALKMFEDESVAKHNDKVQEIANESFNLGEKIPESKIVRK 241
           AYEG  KV+ISRLQL+TSKFEALKMFED+SVA+ N++V EIA+ESFNLGEKI ESKIV K
Sbjct: 111 AYEGTKKVEISRLQLITSKFEALKMFEDQSVAECNERVLEIADESFNLGEKISESKIVGK 170

Query: 242 MLHSL 247
           +L SL
Sbjct: 171 LLRSL 175

[Close]
BLAST of MELO3C035600.2 vs. NCBI nr
Match: XP_008454684.1 (PREDICTED: uncharacterized protein LOC103495039 [Cucumis melo])

HSP 1 Score: 182.2 bits (461), Expect = 2.3e-42
Identity = 94/130 (72.31%), Postives = 113/130 (86.92%), Query Frame = 0 

Query: 133 EVDWTDTEEQAFMVNARALNDIFNGVDLNVFMLINSCSSAKEAWKILEVAYEGITKVKIS 192
           ++DWTD EEQA + NARA+N IFNGVDLNVF LI+SC++AKEAWKILEVAYEG +KVKI 
Sbjct: 6   QIDWTDAEEQASVGNARAINVIFNGVDLNVFKLIDSCTTAKEAWKILEVAYEGTSKVKIF 65

Query: 193 RLQLVTSKFEALKMFEDESVAKHNDKVQEIANESFNLGEKIPESKIVRKMLHSLFEKFDM 252
           RLQLVTSKFEALKM EDE+ +++N++V EIAN+S  LGEKI ESKIVRK+L SL  KFD+
Sbjct: 66  RLQLVTSKFEALKMIEDETASEYNERVLEIANDSLLLGEKIHESKIVRKVLRSLPRKFDI 125

Query: 253 KVMAIEEARN 263
           KV AIEEA++
Sbjct: 126 KVTAIEEAQD 135

[Close]
BLAST of MELO3C035600.2 vs. NCBI nr
Match: XP_008444307.1 (PREDICTED: uncharacterized protein LOC103487675 [Cucumis melo])

HSP 1 Score: 178.3 bits (451), Expect = 3.3e-41
Identity = 99/141 (70.21%), Postives = 114/141 (80.85%), Query Frame = 0 

Query: 122 LAIDGVSVPKSEVDWTDTEEQAFMVNARALNDIFNGVDLNVFMLINSCSSAKEAWKILEV 181
           + ++GVSV K EVD TD EEQA + NARALN IFNGVDLNVF LINSCS+AKEA K LEV
Sbjct: 2   IIVNGVSVLKPEVDRTDVEEQASIGNARALNAIFNGVDLNVFKLINSCSTAKEALKTLEV 61

Query: 182 AYEGITKVKISRLQLVTSKFEALKMFEDESVAKHNDKVQEIANESFNLGEKIPESKIVRK 241
           AYEG +KVKISRLQL+TSKFEAL M EDE V+ +N +V EIANES  L EKIP+SKIVRK
Sbjct: 62  AYEGTSKVKISRLQLITSKFEALNMTEDEPVSDYNKRVLEIANESLMLDEKIPDSKIVRK 121

Query: 242 MLHSLFEKFDMKVMAIEEARN 263
           +L SL   F +KV+AIEEA +
Sbjct: 122 VLQSLPRIFYLKVIAIEEAHD 142

[Close]
BLAST of MELO3C035600.2 vs. NCBI nr
Match: ADN33760.1 (gag-pol polyprotein [Cucumis melo subsp. melo])

HSP 1 Score: 175.3 bits (443), Expect = 2.8e-40
Identity = 94/139 (67.63%), Postives = 111/139 (79.86%), Query Frame = 0 

Query: 122 LAIDGVSVPKSEVDWTDTEEQAFMVNARALNDIFNGVDLNVFMLINSCSSAKEAWKILEV 181
           + +DGV V K +VDW D EEQA + NARA N IFNGVDLN+F  I+SCS+ KEAW ILE 
Sbjct: 52  ITMDGVLVLKPKVDWADVEEQASVGNARAPNPIFNGVDLNLFKPIHSCSTTKEAWSILEG 111

Query: 182 AYEGITKVKISRLQLVTSKFEALKMFEDESVAKHNDKVQEIANESFNLGEKIPESKIVRK 241
           + EG +KVKISRLQL+TSKFEALKM EDESV+++N++V EIANES  LGEKIP+S IV K
Sbjct: 112 SCEGTSKVKISRLQLITSKFEALKMSEDESVSEYNERVLEIANESLLLGEKIPDSMIVWK 171

Query: 242 MLHSLFEKFDMKVMAIEEA 261
           +L SL  KFDMKV  IEEA
Sbjct: 172 ILRSLPRKFDMKVTTIEEA 190

[Close]
BLAST of MELO3C035600.2 vs. TAIR10
Match: AT1G64650.1 (Major facilitator superfamily protein)

HSP 1 Score: 101.3 bits (251), Expect = 9.4e-22
Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0 

Query: 70  RGFKQQWLSITFSKAIFLGNGLVAILTGLFGNVLVDSLSLGPVAPFDVAACFLAI 125
           RGF+QQWLS+TFSKAIFLGNGLVAI+ GLFGN LVDSLSLGPVAPFD AACFLAI
Sbjct: 156 RGFEQQWLSVTFSKAIFLGNGLVAIIAGLFGNYLVDSLSLGPVAPFDAAACFLAI 210

[Close]
BLAST of MELO3C035600.2 vs. TAIR10
Match: AT4G27720.1 (Major facilitator superfamily protein)

HSP 1 Score: 97.4 bits (241), Expect = 1.4e-20
Identity = 49/69 (71.01%), Postives = 58/69 (84.06%), Query Frame = 0 

Query: 70  RGFKQQWLSITFSKAIFLGNGLVAILTGLFGNVLVDSLSLGPVAPFDVAACFLAIDGVSV 129
           RGF+QQWLS+TFSKA+F GNGLVAI+ GLFGN+LVD+ SLGPVAPFD AACFL I G++V
Sbjct: 156 RGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLTI-GMAV 215

Query: 130 PKSEVDWTD 139
             S   WT+
Sbjct: 216 ILS--SWTE 221

[Close]
BLAST of MELO3C035600.2 vs. TAIR10
Match: AT3G49310.1 (Major facilitator superfamily protein)

HSP 1 Score: 95.9 bits (237), Expect = 4.0e-20
Identity = 45/55 (81.82%), Postives = 51/55 (92.73%), Query Frame = 0 

Query: 70  RGFKQQWLSITFSKAIFLGNGLVAILTGLFGNVLVDSLSLGPVAPFDVAACFLAI 125
           R F+QQWLS+TFSKA+FLGNGLVAIL+GLFGN+LVD+ S GPVAPFD AACFLAI
Sbjct: 156 RNFEQQWLSLTFSKAVFLGNGLVAILSGLFGNLLVDTFSFGPVAPFDAAACFLAI 210

[Close]
BLAST of MELO3C035600.2 vs. TAIR10
Match: AT5G27110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 85.1 bits (209), Expect = 7.0e-17
Identity = 35/69 (50.72%), Postives = 54/69 (78.26%), Query Frame = 0 

Query: 1   MGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAETALKMFDKMKELG 60
           + SSL+ MYAK + F +++++FDE P+RDV  WN VISC+++ G+AE AL++F +M+  G
Sbjct: 144 VASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSG 203

Query: 61  FEPNSLTFT 70
           FEPNS++ T
Sbjct: 204 FEPNSVSLT 212

[Close]
BLAST of MELO3C035600.2 vs. TAIR10
Match: AT3G02010.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-11
Identity = 29/66 (43.94%), Postives = 44/66 (66.67%), Query Frame = 0 

Query: 2   GSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAETALKMFDKMKELGF 61
           GS L++MYAKC    DA+++F+E P R+   WNA+IS +  +G  E A+  F KM E G 
Sbjct: 490 GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGL 549

Query: 62  EPNSLT 68
           +P+S++
Sbjct: 550 QPDSVS 555

[Close]
BLAST of MELO3C035600.2 vs. Swiss-Prot
Match: sp|O04659|PP398_ARATH (Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E14 PE=2 SV=2)

HSP 1 Score: 85.1 bits (209), Expect = 1.3e-15
Identity = 35/69 (50.72%), Postives = 54/69 (78.26%), Query Frame = 0 

Query: 1   MGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAETALKMFDKMKELG 60
           + SSL+ MYAK + F +++++FDE P+RDV  WN VISC+++ G+AE AL++F +M+  G
Sbjct: 144 VASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSG 203

Query: 61  FEPNSLTFT 70
           FEPNS++ T
Sbjct: 204 FEPNSVSLT 212

[Close]
BLAST of MELO3C035600.2 vs. Swiss-Prot
Match: sp|Q9S7F4|PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H36 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.1e-10
Identity = 29/66 (43.94%), Postives = 44/66 (66.67%), Query Frame = 0 

Query: 2   GSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAETALKMFDKMKELGF 61
           GS L++MYAKC    DA+++F+E P R+   WNA+IS +  +G  E A+  F KM E G 
Sbjct: 490 GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGL 549

Query: 62  EPNSLT 68
           +P+S++
Sbjct: 550 QPDSVS 555

[Close]
BLAST of MELO3C035600.2 vs. Swiss-Prot
Match: sp|Q9SVA5|PP357_ARATH (Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E52 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.1e-10
Identity = 31/62 (50.00%), Postives = 40/62 (64.52%), Query Frame = 0 

Query: 3   SSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAETALKMFDKMKELGFE 62
           ++L++MYAKC    DA K FD    RDV CWN+VIS Y   G+ + AL+M +KM   G E
Sbjct: 594 NALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIE 653

Query: 63  PN 65
           PN
Sbjct: 654 PN 655

[Close]
BLAST of MELO3C035600.2 vs. Swiss-Prot
Match: sp|O64705|PP184_ARATH (Pentatricopeptide repeat-containing protein At2g34400 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E23 PE=3 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 4.6e-10
Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 0 

Query: 4   SLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAETALKMFDKMKELGFEP 63
           SL+ MYAKC Q   A KLFDE  +RD   WN++IS Y + G A+ A+ +F KM+E GFEP
Sbjct: 172 SLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEP 231

Query: 64  NSLT 68
           +  T
Sbjct: 232 DERT 235

[Close]
BLAST of MELO3C035600.2 vs. Swiss-Prot
Match: sp|Q9FM64|PP431_ARATH (Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR21 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.6e-10
Identity = 29/67 (43.28%), Postives = 43/67 (64.18%), Query Frame = 0 

Query: 1   MGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAETALKMFDKMKELG 60
           + SSL +MY KC    DA K+FDE P R+   WNA++  Y ++GK E A+++F  M++ G
Sbjct: 210 VASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQG 269

Query: 61  FEPNSLT 68
            EP  +T
Sbjct: 270 VEPTRVT 276

[Close]
BLAST of MELO3C035600.2 vs. TrEMBL
Match: tr|A0A1S4E5V5|A0A1S4E5V5_CUCME (uncharacterized protein LOC107992254 OS=Cucumis melo OX=3656 GN=LOC107992254 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 3.9e-46
Identity = 99/141 (70.21%), Postives = 122/141 (86.52%), Query Frame = 0 

Query: 122 LAIDGVSVPKSEVDWTDTEEQAFMVNARALNDIFNGVDLNVFMLINSCSSAKEAWKILEV 181
           + ++GVSVPK E+DWTD EE+A + NARA+N +FNGVDLN+F LINS ++AKEAWKILEV
Sbjct: 25  ITVNGVSVPKPEIDWTDAEEKASVGNARAINAMFNGVDLNIFKLINSYTTAKEAWKILEV 84

Query: 182 AYEGITKVKISRLQLVTSKFEALKMFEDESVAKHNDKVQEIANESFNLGEKIPESKIVRK 241
           AYEG +KVKISRLQL+TSKFEALKM EDE+V+++N++V EIAN+S  L EKIPESKIV K
Sbjct: 85  AYEGTSKVKISRLQLITSKFEALKMTEDETVSEYNERVLEIANDSLLLAEKIPESKIVCK 144

Query: 242 MLHSLFEKFDMKVMAIEEARN 263
           +L SL  KFDMKV AIEEA++
Sbjct: 145 VLRSLPRKFDMKVTAIEEAQD 165

[Close]
BLAST of MELO3C035600.2 vs. TrEMBL
Match: tr|A0A1S4DXW9|A0A1S4DXW9_CUCME (uncharacterized protein LOC107991049 OS=Cucumis melo OX=3656 GN=LOC107991049 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 4.0e-43
Identity = 95/125 (76.00%), Postives = 108/125 (86.40%), Query Frame = 0 

Query: 122 LAIDGVSVPKSEVDWTDTEEQAFMVNARALNDIFNGVDLNVFMLINSCSSAKEAWKILEV 181
           + IDG  VPKSEVDWTD EEQA + N+ A+N IFNGVDLNVF LINSCSS K+AWKILEV
Sbjct: 51  ITIDGHCVPKSEVDWTDVEEQASVRNSTAINTIFNGVDLNVFKLINSCSSVKKAWKILEV 110

Query: 182 AYEGITKVKISRLQLVTSKFEALKMFEDESVAKHNDKVQEIANESFNLGEKIPESKIVRK 241
           AYEG  KV+ISRLQL+TSKFEALKMFED+SVA+ N++V EIA+ESFNLGEKI ESKIV K
Sbjct: 111 AYEGTKKVEISRLQLITSKFEALKMFEDQSVAECNERVLEIADESFNLGEKISESKIVGK 170

Query: 242 MLHSL 247
           +L SL
Sbjct: 171 LLRSL 175

[Close]
BLAST of MELO3C035600.2 vs. TrEMBL
Match: tr|A0A1S3BZ69|A0A1S3BZ69_CUCME (uncharacterized protein LOC103495039 OS=Cucumis melo OX=3656 GN=LOC103495039 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.5e-42
Identity = 94/130 (72.31%), Postives = 113/130 (86.92%), Query Frame = 0 

Query: 133 EVDWTDTEEQAFMVNARALNDIFNGVDLNVFMLINSCSSAKEAWKILEVAYEGITKVKIS 192
           ++DWTD EEQA + NARA+N IFNGVDLNVF LI+SC++AKEAWKILEVAYEG +KVKI 
Sbjct: 6   QIDWTDAEEQASVGNARAINVIFNGVDLNVFKLIDSCTTAKEAWKILEVAYEGTSKVKIF 65

Query: 193 RLQLVTSKFEALKMFEDESVAKHNDKVQEIANESFNLGEKIPESKIVRKMLHSLFEKFDM 252
           RLQLVTSKFEALKM EDE+ +++N++V EIAN+S  LGEKI ESKIVRK+L SL  KFD+
Sbjct: 66  RLQLVTSKFEALKMIEDETASEYNERVLEIANDSLLLGEKIHESKIVRKVLRSLPRKFDI 125

Query: 253 KVMAIEEARN 263
           KV AIEEA++
Sbjct: 126 KVTAIEEAQD 135

[Close]
BLAST of MELO3C035600.2 vs. TrEMBL
Match: tr|A0A1S3BAW0|A0A1S3BAW0_CUCME (uncharacterized protein LOC103487675 OS=Cucumis melo OX=3656 GN=LOC103487675 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.2e-41
Identity = 99/141 (70.21%), Postives = 114/141 (80.85%), Query Frame = 0 

Query: 122 LAIDGVSVPKSEVDWTDTEEQAFMVNARALNDIFNGVDLNVFMLINSCSSAKEAWKILEV 181
           + ++GVSV K EVD TD EEQA + NARALN IFNGVDLNVF LINSCS+AKEA K LEV
Sbjct: 2   IIVNGVSVLKPEVDRTDVEEQASIGNARALNAIFNGVDLNVFKLINSCSTAKEALKTLEV 61

Query: 182 AYEGITKVKISRLQLVTSKFEALKMFEDESVAKHNDKVQEIANESFNLGEKIPESKIVRK 241
           AYEG +KVKISRLQL+TSKFEAL M EDE V+ +N +V EIANES  L EKIP+SKIVRK
Sbjct: 62  AYEGTSKVKISRLQLITSKFEALNMTEDEPVSDYNKRVLEIANESLMLDEKIPDSKIVRK 121

Query: 242 MLHSLFEKFDMKVMAIEEARN 263
           +L SL   F +KV+AIEEA +
Sbjct: 122 VLQSLPRIFYLKVIAIEEAHD 142

[Close]
BLAST of MELO3C035600.2 vs. TrEMBL
Match: tr|E5GBB9|E5GBB9_CUCME (Gag-pol polyprotein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.9e-40
Identity = 94/139 (67.63%), Postives = 111/139 (79.86%), Query Frame = 0 

Query: 122 LAIDGVSVPKSEVDWTDTEEQAFMVNARALNDIFNGVDLNVFMLINSCSSAKEAWKILEV 181
           + +DGV V K +VDW D EEQA + NARA N IFNGVDLN+F  I+SCS+ KEAW ILE 
Sbjct: 52  ITMDGVLVLKPKVDWADVEEQASVGNARAPNPIFNGVDLNLFKPIHSCSTTKEAWSILEG 111

Query: 182 AYEGITKVKISRLQLVTSKFEALKMFEDESVAKHNDKVQEIANESFNLGEKIPESKIVRK 241
           + EG +KVKISRLQL+TSKFEALKM EDESV+++N++V EIANES  LGEKIP+S IV K
Sbjct: 112 SCEGTSKVKISRLQLITSKFEALKMSEDESVSEYNERVLEIANESLLLGEKIPDSMIVWK 171

Query: 242 MLHSLFEKFDMKVMAIEEA 261
           +L SL  KFDMKV  IEEA
Sbjct: 172 ILRSLPRKFDMKVTTIEEA 190

The following BLAST results are available for this feature:
BLAST of MELO3C035600.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016903608.15.9e-4670.21PREDICTED: uncharacterized protein LOC107992254 [Cucumis melo][more]
XP_016900834.16.1e-4376.00PREDICTED: uncharacterized protein LOC107991049 [Cucumis melo][more]
XP_008454684.12.3e-4272.31PREDICTED: uncharacterized protein LOC103495039 [Cucumis melo][more]
XP_008444307.13.3e-4170.21PREDICTED: uncharacterized protein LOC103487675 [Cucumis melo][more]
ADN33760.12.8e-4067.63gag-pol polyprotein [Cucumis melo subsp. melo][more]
BLAST of MELO3C035600.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G64650.19.4e-2289.09Major facilitator superfamily protein[more]
AT4G27720.11.4e-2071.01Major facilitator superfamily protein[more]
AT3G49310.14.0e-2081.82Major facilitator superfamily protein[more]
AT5G27110.17.0e-1750.72Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G02010.11.2e-1143.94Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of MELO3C035600.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O04659|PP398_ARATH1.3e-1550.72Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana OX... [more]
sp|Q9S7F4|PP206_ARATH2.1e-1043.94Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis th... [more]
sp|Q9SVA5|PP357_ARATH2.1e-1050.00Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana OX... [more]
sp|O64705|PP184_ARATH4.6e-1051.56Pentatricopeptide repeat-containing protein At2g34400 OS=Arabidopsis thaliana OX... [more]
sp|Q9FM64|PP431_ARATH4.6e-1043.28Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidop... [more]
BLAST of MELO3C035600.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E5V5|A0A1S4E5V5_CUCME3.9e-4670.21uncharacterized protein LOC107992254 OS=Cucumis melo OX=3656 GN=LOC107992254 PE=... [more]
tr|A0A1S4DXW9|A0A1S4DXW9_CUCME4.0e-4376.00uncharacterized protein LOC107991049 OS=Cucumis melo OX=3656 GN=LOC107991049 PE=... [more]
tr|A0A1S3BZ69|A0A1S3BZ69_CUCME1.5e-4272.31uncharacterized protein LOC103495039 OS=Cucumis melo OX=3656 GN=LOC103495039 PE=... [more]
tr|A0A1S3BAW0|A0A1S3BAW0_CUCME2.2e-4170.21uncharacterized protein LOC103487675 OS=Cucumis melo OX=3656 GN=LOC103487675 PE=... [more]
tr|E5GBB9|E5GBB9_CUCME1.9e-4067.63Gag-pol polyprotein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0015098molybdate ion transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0015689molybdate ion transport
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
IPR008509MOT2/MFSD5
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
biological_process GO:0015689 molybdate ion transport
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004185 serine-type carboxypeptidase activity
molecular_function GO:0015098 molybdate ion transmembrane transporter activity
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035600.2.1MELO3C035600.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008509Molybdate-anion transporterPFAMPF05631MFS_5coord: 69..142
e-value: 5.1E-22
score: 78.2
IPR008509Molybdate-anion transporterPANTHERPTHR23516FAMILY NOT NAMEDcoord: 69..129
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 3..28
e-value: 0.0062
score: 16.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 32..65
e-value: 1.3E-10
score: 38.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 29..69
e-value: 9.0E-13
score: 48.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 29..63
score: 12.88
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1..28
score: 6.511
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 147..259
e-value: 4.1E-21
score: 75.0
NoneNo IPR availablePANTHERPTHR23516:SF12SUBFAMILY NOT NAMEDcoord: 69..129
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 1..75
e-value: 6.1E-18
score: 66.8

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C035600.2Cucumber (Gy14) v2cgybmedB009
MELO3C035600.2Cucumber (Gy14) v1cgymedB528
MELO3C035600.2Cucurbita maxima (Rimu)cmamedB221
MELO3C035600.2Cucurbita maxima (Rimu)cmamedB425
MELO3C035600.2Cucurbita moschata (Rifu)cmomedB209
MELO3C035600.2Cucurbita moschata (Rifu)cmomedB400
MELO3C035600.2Cucurbita pepo (Zucchini)cpemedB006
MELO3C035600.2Cucurbita pepo (Zucchini)cpemedB033
MELO3C035600.2Wild cucumber (PI 183967)cpimedB011
MELO3C035600.2Cucumber (Chinese Long) v2cumedB010
MELO3C035600.2Melon (DHL92) v3.6.1medmedB071
MELO3C035600.2Bottle gourd (USVL1VR-Ls)lsimedB192
MELO3C035600.2Watermelon (Charleston Gray)medwcgB133
MELO3C035600.2Watermelon (97103) v1medwmB167
MELO3C035600.2Silver-seed gourdcarmedB0000
MELO3C035600.2Silver-seed gourdcarmedB0967
MELO3C035600.2Cucumber (Chinese Long) v3cucmedB009
MELO3C035600.2Watermelon (97103) v2medwmbB132
MELO3C035600.2Wax gourdmedwgoB176