MELO3C035592.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C035592.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	heparan-alpha-glucosaminide N-acetyltransferase-like
Location	chr12 : 12064827 .. 12066203 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCAACCTTGTCGTCGTCAAACCACCACTAGAAGAAATCCACCACCGTTGTGCTCACCACCACCGTAAGCCCACCCGTGCTCAGTCGTCATCGAACCCACCACCGCCGTTGTGCTCGCCACTAGAAGGTCTATCCCAACCGTCGCCACCACCATGCTCAGCCGTGTCTATTACGTAATCTTGAATTTGATCTACTCGTTGTCAAATCTGCATTCGAAGGGCCAGCCATTGAACGCCTTGAACGATTCCGAAGTCGCCCAATGAAGTGGATTACCAACTATCTTATCAATGCTCATCCTTCATAAAATGTGCTTTCCTTTCAGATAACTATTTGTTTCCTCGTAGCATTGTCCCTGTGTTCTTGCATCTCTATGTAATATGAACTTGTTAGTTTACAATCAAAAAGAAGTTTGTGTATGTCGATTATGTAATCCTTTATAACTAAAGCTATATACTGAGTAACTACTGGAAAACTTCCATTTATTTACATTTTCCCATATCTTCATAAGTTTTCTTTTATGTATAGTTTTGCTCTTCACTTTAAGTTTTAGACTTTAAGCTTCTGCTAATGGAGATGGTTATTCATAGATCTTATCAAATCTAGCCATTTTGCACCAAGCTAAGTAAGCTAGCCATTTCAATAAATTTTTTACTTTTTGGTTGCACAAGTTTGAAGAAATCTTTTAATTTTTTTTTAGTTTACATTGTGTATGTGGATTCTTTCGTATGGTGTTGAAGTGGTACTGATTTTCCATTTTGATTAGCATTCTAGTTGATACGGCTGAGTCTAGCAAATTATTTTTGGACAATATTCAAGGAATGGAAGGTGAAACCTGCTTAGAATGTTGATGAATAAAAAAGAAAAGGGTTGTTTTTGTTATGTATAAAAAAAATCACTCTTGAGATCTGCTGAGAAATTTAGTCTACGAGATTGGAACAATGTGACTAATGATTAACAAAATAAAGGTTGTATTTATAATTAATAATTCAGGACTGTCGTTTAGTACACGGGACAAAGGCTCTATTCGAGATGGTACTCCTAGTTGGTGTCTAGCTCTGTTCGAGCTTGAGGGCTTGTTGAGGTTTGACACTTTAAATAATTTAATCTAGTGTCTATGTCTAAACTAATTGAATTATATTGAAGTGCGAAGTTGGATTAATTTTGTTTGGCTTCGTTGATTTTAGTTCCATTTCAGCCATTCTTTCTGATACCATTGGCATCCATTATGGCCATGTTCTGCTTCATTCCAAGGTATAGAACAAAGCTCTAGTTCAGTTGAATGTATGGATTTGCATTTAGAGATTGAAAAGTAGAGATGAAATTGATCGTTGTCGAAGTTTTTTGTAGACTCATTTTCAAAGGCTGAAGCAATAG

mRNA sequence

ATGCCCAACCTTGTCGTCGTCAAACCACCACTAGAAGAAATCCACCACCGTTGTGCTCACCACCACCGTAAGCCCACCCGTGCTCAGTCGTCATCGAACCCACCACCGCCGTTGTGCTCGCCACTAGAAGGTCTATCCCAACCGTCGCCACCACCATGCTCAGCCGTGTCTATTACCATTCTAGTTGATACGGCTGAGTCTAGCAAATTATTTTTGGACAATATTCAAGGAATGGAAGGACTGTCGTTTAGTACACGGGACAAAGGCTCTATTCGAGATGGTACTCCTAGTTGGTGTCTAGCTCTGTTCGAGCTTGAGGGCTTGTTGAGTTCCATTTCAGCCATTCTTTCTGATACCATTGGCATCCATTATGGCCATGTTCTGCTTCATTCCAAGACTCATTTTCAAAGGCTGAAGCAATAG

Coding sequence (CDS)

ATGCCCAACCTTGTCGTCGTCAAACCACCACTAGAAGAAATCCACCACCGTTGTGCTCACCACCACCGTAAGCCCACCCGTGCTCAGTCGTCATCGAACCCACCACCGCCGTTGTGCTCGCCACTAGAAGGTCTATCCCAACCGTCGCCACCACCATGCTCAGCCGTGTCTATTACCATTCTAGTTGATACGGCTGAGTCTAGCAAATTATTTTTGGACAATATTCAAGGAATGGAAGGACTGTCGTTTAGTACACGGGACAAAGGCTCTATTCGAGATGGTACTCCTAGTTGGTGTCTAGCTCTGTTCGAGCTTGAGGGCTTGTTGAGTTCCATTTCAGCCATTCTTTCTGATACCATTGGCATCCATTATGGCCATGTTCTGCTTCATTCCAAGACTCATTTTCAAAGGCTGAAGCAATAG

Protein sequence

MPNLVVVKPPLEEIHHRCAHHHRKPTRAQSSSNPPPPLCSPLEGLSQPSPPPCSAVSITILVDTAESSKLFLDNIQGMEGLSFSTRDKGSIRDGTPSWCLALFELEGLLSSISAILSDTIGIHYGHVLLHSKTHFQRLKQ

Homology

[Close]

BLAST of MELO3C035592.2 vs. NCBI nr
Match: XP_016901630.1 (PREDICTED: uncharacterized protein LOC107991323 [Cucumis melo])

HSP 1 Score: 94.4 bits (233), Expect = 3.4e-16
Identity = 44/54 (81.48%), Postives = 48/54 (88.89%), Query Frame = 0


Query: 87  DKGSIRDGTPSWCLALFELEGLLSSISAILSDTIGIHYGHVLLHSKTHFQRLKQ 141
           DKGSIRD  PSWCLALF+ EGLLSS+SA+LS TIGIHYGHVLLH +TH QRLKQ
Sbjct: 2   DKGSIRDSAPSWCLALFKPEGLLSSVSALLSSTIGIHYGHVLLHFETHSQRLKQ 55

[Close]

BLAST of MELO3C035592.2 vs. NCBI nr
Match: XP_008442720.1 (PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like [Cucumis melo])

HSP 1 Score: 94.0 bits (232), Expect = 4.4e-16
Identity = 45/59 (76.27%), Postives = 49/59 (83.05%), Query Frame = 0


Query: 82  SFSTRDKGSIRDGTPSWCLALFELEGLLSSISAILSDTIGIHYGHVLLHSKTHFQRLKQ 141
           +FS  D+G +RD  PSWCLA FE EGLLSS+SAILS TIGIHYGHVLLH KTH QRLKQ
Sbjct: 289 TFSAPDEGPLRDDAPSWCLAPFEPEGLLSSVSAILSGTIGIHYGHVLLHFKTHSQRLKQ 347

[Close]

BLAST of MELO3C035592.2 vs. NCBI nr
Match: KGN58995.1 (hypothetical protein Csa_3G741850 [Cucumis sativus])

HSP 1 Score: 90.9 bits (224), Expect = 3.7e-15
Identity = 44/59 (74.58%), Postives = 48/59 (81.36%), Query Frame = 0


Query: 82  SFSTRDKGSIRDGTPSWCLALFELEGLLSSISAILSDTIGIHYGHVLLHSKTHFQRLKQ 141
           +FS  D+G +RD   SWCLA FE EGLLSS+SAILS TIGIHYGHVLLH KTH QRLKQ
Sbjct: 123 TFSAPDEGPLRDDAASWCLAPFEPEGLLSSVSAILSGTIGIHYGHVLLHFKTHSQRLKQ 181

[Close]

BLAST of MELO3C035592.2 vs. NCBI nr
Match: XP_011651969.1 (PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like [Cucumis sativus])

HSP 1 Score: 90.9 bits (224), Expect = 3.7e-15
Identity = 44/59 (74.58%), Postives = 48/59 (81.36%), Query Frame = 0


Query: 82  SFSTRDKGSIRDGTPSWCLALFELEGLLSSISAILSDTIGIHYGHVLLHSKTHFQRLKQ 141
           +FS  D+G +RD   SWCLA FE EGLLSS+SAILS TIGIHYGHVLLH KTH QRLKQ
Sbjct: 163 TFSAPDEGPLRDDAASWCLAPFEPEGLLSSVSAILSGTIGIHYGHVLLHFKTHSQRLKQ 221

[Close]

BLAST of MELO3C035592.2 vs. NCBI nr
Match: XP_022144688.1 (heparan-alpha-glucosaminide N-acetyltransferase-like [Momordica charantia])

HSP 1 Score: 90.9 bits (224), Expect = 3.7e-15
Identity = 43/63 (68.25%), Postives = 50/63 (79.37%), Query Frame = 0


Query: 78  MEGLSFSTRDKGSIRDGTPSWCLALFELEGLLSSISAILSDTIGIHYGHVLLHSKTHFQR 137
           ++  +FS+ D G +RD  PSWCLA FE EGLLSS+SAILS TIGIHYGHVL+H K H QR
Sbjct: 277 LKDCTFSSPDDGPLRDDAPSWCLAPFEPEGLLSSVSAILSGTIGIHYGHVLVHFKAHSQR 336

Query: 138 LKQ 141
           LKQ
Sbjct: 337 LKQ 339

[Close]

BLAST of MELO3C035592.2 vs. TAIR10
Match: AT5G27730.1 (Protein of unknown function (DUF1624))

HSP 1 Score: 72.4 bits (176), Expect = 2.5e-13
Identity = 33/52 (63.46%), Postives = 40/52 (76.92%), Query Frame = 0


Query: 88  KGSIRDGTPSWCLALFELEGLLSSISAILSDTIGIHYGHVLLHSKTHFQRLK 140
           +G+IR   PSWC A FE EG+LSSISAILS  IG+H+GH++LH K H  RLK
Sbjct: 274 EGAIRQDAPSWCRAPFEPEGILSSISAILSTIIGVHFGHIILHLKGHSARLK 325

[Close]

BLAST of MELO3C035592.2 vs. TAIR10
Match: AT5G47900.1 (Protein of unknown function (DUF1624))

HSP 1 Score: 60.8 bits (146), Expect = 7.5e-10
Identity = 26/59 (44.07%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 82  SFSTRDKGSIRDGTPSWCLALFELEGLLSSISAILSDTIGIHYGHVLLHSKTHFQRLKQ 141
           S +  + G +    PSWC A F+ EGLLSS+ A ++  +G+HYGH+++H K H +RL Q
Sbjct: 277 SINYPNNGPLPPDAPSWCQAPFDPEGLLSSLMATVTCLVGLHYGHIIIHFKDHKKRLNQ 335

[Close]

BLAST of MELO3C035592.2 vs. TrEMBL
Match: tr|A0A1S4E0Y1|A0A1S4E0Y1_CUCME (uncharacterized protein LOC107991323 OS=Cucumis melo OX=3656 GN=LOC107991323 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.2e-16
Identity = 44/54 (81.48%), Postives = 48/54 (88.89%), Query Frame = 0


Query: 87  DKGSIRDGTPSWCLALFELEGLLSSISAILSDTIGIHYGHVLLHSKTHFQRLKQ 141
           DKGSIRD  PSWCLALF+ EGLLSS+SA+LS TIGIHYGHVLLH +TH QRLKQ
Sbjct: 2   DKGSIRDSAPSWCLALFKPEGLLSSVSALLSSTIGIHYGHVLLHFETHSQRLKQ 55

[Close]

BLAST of MELO3C035592.2 vs. TrEMBL
Match: tr|A0A1S3B5V7|A0A1S3B5V7_CUCME (heparan-alpha-glucosaminide N-acetyltransferase-like OS=Cucumis melo OX=3656 GN=LOC103486510 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.9e-16
Identity = 45/59 (76.27%), Postives = 49/59 (83.05%), Query Frame = 0


Query: 82  SFSTRDKGSIRDGTPSWCLALFELEGLLSSISAILSDTIGIHYGHVLLHSKTHFQRLKQ 141
           +FS  D+G +RD  PSWCLA FE EGLLSS+SAILS TIGIHYGHVLLH KTH QRLKQ
Sbjct: 289 TFSAPDEGPLRDDAPSWCLAPFEPEGLLSSVSAILSGTIGIHYGHVLLHFKTHSQRLKQ 347

[Close]

BLAST of MELO3C035592.2 vs. TrEMBL
Match: tr|A0A0A0LAL6|A0A0A0LAL6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G741850 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.5e-15
Identity = 44/59 (74.58%), Postives = 48/59 (81.36%), Query Frame = 0


Query: 82  SFSTRDKGSIRDGTPSWCLALFELEGLLSSISAILSDTIGIHYGHVLLHSKTHFQRLKQ 141
           +FS  D+G +RD   SWCLA FE EGLLSS+SAILS TIGIHYGHVLLH KTH QRLKQ
Sbjct: 123 TFSAPDEGPLRDDAASWCLAPFEPEGLLSSVSAILSGTIGIHYGHVLLHFKTHSQRLKQ 181

[Close]

BLAST of MELO3C035592.2 vs. TrEMBL
Match: tr|A0A072U2U8|A0A072U2U8_MEDTR (Heparan-alpha-glucosaminide N-acetyltransferase-like protein OS=Medicago truncatula OX=3880 GN=25499328 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 9.4e-15
Identity = 42/63 (66.67%), Postives = 50/63 (79.37%), Query Frame = 0


Query: 78  MEGLSFSTRDKGSIRDGTPSWCLALFELEGLLSSISAILSDTIGIHYGHVLLHSKTHFQR 137
           ++  +FS+  +G  RD  PSWCLA FE EGLLSSISAILS TIGIHYGHVL+H K+H +R
Sbjct: 287 LKACTFSSPSEGPFRDDAPSWCLAPFEPEGLLSSISAILSGTIGIHYGHVLIHFKSHSER 346

Query: 138 LKQ 141
           LKQ
Sbjct: 347 LKQ 349

[Close]

BLAST of MELO3C035592.2 vs. TrEMBL
Match: tr|A0A0R0KSG2|A0A0R0KSG2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_03G184900 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.6e-14
Identity = 42/63 (66.67%), Postives = 48/63 (76.19%), Query Frame = 0


Query: 78  MEGLSFSTRDKGSIRDGTPSWCLALFELEGLLSSISAILSDTIGIHYGHVLLHSKTHFQR 137
           ++  +FS+   G  RD  PSWCLA FE EGLLSSISAILS TIGIHYGHVL+H K H +R
Sbjct: 300 LKACTFSSPGSGPFRDDAPSWCLAPFEPEGLLSSISAILSGTIGIHYGHVLIHFKGHSER 359

Query: 138 LKQ 141
           LKQ
Sbjct: 360 LKQ 362

The following BLAST results are available for this feature:

BLAST of MELO3C035592.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901630.1	3.4e-16	81.48	PREDICTED: uncharacterized protein LOC107991323 [Cucumis melo]	[more]
XP_008442720.1	4.4e-16	76.27	PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like [Cucumis melo]	[more]
KGN58995.1	3.7e-15	74.58	hypothetical protein Csa_3G741850 [Cucumis sativus]	[more]
XP_011651969.1	3.7e-15	74.58	PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like [Cucumis sativus...	[more]
XP_022144688.1	3.7e-15	68.25	heparan-alpha-glucosaminide N-acetyltransferase-like [Momordica charantia]	[more]

BLAST of MELO3C035592.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G27730.1	2.5e-13	63.46	Protein of unknown function (DUF1624)	[more]
AT5G47900.1	7.5e-10	44.07	Protein of unknown function (DUF1624)	[more]

BLAST of MELO3C035592.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C035592.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E0Y1\|A0A1S4E0Y1_CUCME	2.2e-16	81.48	uncharacterized protein LOC107991323 OS=Cucumis melo OX=3656 GN=LOC107991323 PE=...	[more]
tr\|A0A1S3B5V7\|A0A1S3B5V7_CUCME	2.9e-16	76.27	heparan-alpha-glucosaminide N-acetyltransferase-like OS=Cucumis melo OX=3656 GN=...	[more]
tr\|A0A0A0LAL6\|A0A0A0LAL6_CUCSA	2.5e-15	74.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G741850 PE=4 SV=1	[more]
tr\|A0A072U2U8\|A0A072U2U8_MEDTR	9.4e-15	66.67	Heparan-alpha-glucosaminide N-acetyltransferase-like protein OS=Medicago truncat...	[more]
tr\|A0A0R0KSG2\|A0A0R0KSG2_SOYBN	3.6e-14	66.67	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_03G184900 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035592.2.1	MELO3C035592.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..48
None	No IPR available	PANTHER	PTHR31061	FAMILY NOT NAMED	coord: 82..140
None	No IPR available	PANTHER	PTHR31061:SF5	SUBFAMILY NOT NAMED	coord: 82..140

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C035592.2	Silver-seed gourd	carmedB0000
MELO3C035592.2	Cucumber (Chinese Long) v3	cucmedB009
MELO3C035592.2	Watermelon (97103) v2	medwmbB132
MELO3C035592.2	Wax gourd	medwgoB176
MELO3C035592.2	Cucumber (Gy14) v2	cgybmedB009
MELO3C035592.2	Cucumber (Gy14) v1	cgymedB528
MELO3C035592.2	Cucurbita maxima (Rimu)	cmamedB425
MELO3C035592.2	Cucurbita moschata (Rifu)	cmomedB400
MELO3C035592.2	Cucurbita pepo (Zucchini)	cpemedB033
MELO3C035592.2	Wild cucumber (PI 183967)	cpimedB011
MELO3C035592.2	Cucumber (Chinese Long) v2	cumedB010
MELO3C035592.2	Bottle gourd (USVL1VR-Ls)	lsimedB255
MELO3C035592.2	Watermelon (Charleston Gray)	medwcgB133
MELO3C035592.2	Watermelon (97103) v1	medwmB167