MELO3C035588.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C035588.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Myb/SANT-like DNA-binding domain protein
Location	chr12 : 11491933 .. 11492932 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCAACGATTCGATAGCCGAATAAAATTGTTGAAGAGAATGTTTCATGCAATTGCGGAGATGTGTGGCCCAACTTGCAGTAGATTTGGGTGGAATGATGAACAAAAATGCATCGTCGCAGAGAAAGAAGTCTTTGACAATTGGGTCAAGGTGCGTTACTAGTCATTTGTGTGATTACTGTAGTATATTTCAAAAATTGGACTAACAATTTATTATTGCACTTATACAGAGTCATCCGACGGCCAAGGGCCTCCTTAATAAGTCGTTTCCCCACTATGACGAACTGTCGTATGTGTTTGGCAAAGATCGTGCAACGGGAGGCCGGGCCGAGAGTTTTGCAAACATTGGGTTAAACGATCCTGCTGGGTACGAGCCATTTGCCGTTGACGCTACGCCGGATACGGACTTCCAACCTATGTATAGTCAAGGATTGAACATGTCACCTGATGAATTGATGGGAATAAGAAATGCTCAGGTAAGTGAAGGTAGGTATGTTTCGAGCGGGTCTAAGCGGAAACGTAAAGGACAGGCCACAGACAGTGGGGACGTACTTCGCACTGCGATTGAGTATGGAAATGAACAACTGAACTGCATTGCTGAATGGCCTATCCTACAACGTCAAGACGCTAGCCAAACACGTCAAGAGGTTGTCCCAGTTGGAGGCCATCCCTGAGCTGACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATGACATGAAAGCTTTCCTTGAGGTTCCCGACAATATGAAATACCCGTACTGCAACATCATTCTTCAAAAAAACCGATGACTAGTTTGTTTGTTCTATTTGTATTGGTGGTTTTTTGTACTTGGACTATATGTTCATTAATTTACTTATTTTGTCTTATTATCTAACAAAATTCTCTTTCTCTTCAAGCTTGGTTTGTATTTTCATTTCGTTTTCCAATGTAATGGTTTGATATTGTTGTATTATAGTATTAATGTACTGTTTTCGTTTAA

mRNA sequence

ATGCTTCAACGATTCGATAGCCGAATAAAATTGTTGAAGAGAATGTTTCATGCAATTGCGGAGATGTGTGGCCCAACTTGCAGTAGATTTGGGTGGAATGATGAACAAAAATGCATCGTCGCAGAGAAAGAAGTCTTTGACAATTGGGTCAAGAGTCATCCGACGGCCAAGGGCCTCCTTAATAAGTCGTTTCCCCACTATGACGAACTGTCGTATGTGTTTGGCAAAGATCGTGCAACGGGAGGCCGGGCCGAGAGTTTTGCAAACATTGGGTTAAACGATCCTGCTGGGTACGAGCCATTTGCCGTTGACGCTACGCCGGATACGGACTTCCAACCTATGTATAGTCAAGGATTGAACATGTCACCTGATGAATTGATGGGAATAAGAAATGCTCAGGTAAGTGAAGGTAGGTATGTTTCGAGCGGGTCTAAGCGGAAACGTAAAGGACAGGCCACAGACAGTGGGGACGTACTTCGCACTGCGATTGAGTATGGAAATGAACAACTGAACTGCATTGCTGAATGGCCTATCCTACAACGTCAAGACGCTAGCCAAACACGTCAAGAGGTTGTCCCAGTTGGAGGCCATCCCTGAGCTGACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATGACATGAAAGCTTTCCTTGAGGTTCCCGACAATATGAAATACCCGTACTGCAACATCATTCTTCAAAAAAACCGATGACTAGTTTGTTTGTTCTATTTGTATTGGTGGTTTTTTGTACTTGGACTATATGTTCATTAATTTACTTATTTTGTCTTATTATCTAACAAAATTCTCTTTCTCTTCAAGCTTGGTTTGTATTTTCATTTCGTTTTCCAATGTAATGGTTTGATATTGTTGTATTATAGTATTAATGTACTGTTTTCGTTTAA

Coding sequence (CDS)

ATGCTTCAACGATTCGATAGCCGAATAAAATTGTTGAAGAGAATGTTTCATGCAATTGCGGAGATGTGTGGCCCAACTTGCAGTAGATTTGGGTGGAATGATGAACAAAAATGCATCGTCGCAGAGAAAGAAGTCTTTGACAATTGGGTCAAGAGTCATCCGACGGCCAAGGGCCTCCTTAATAAGTCGTTTCCCCACTATGACGAACTGTCGTATGTGTTTGGCAAAGATCGTGCAACGGGAGGCCGGGCCGAGAGTTTTGCAAACATTGGGTTAAACGATCCTGCTGGGTACGAGCCATTTGCCGTTGACGCTACGCCGGATACGGACTTCCAACCTATGTATAGTCAAGGATTGAACATGTCACCTGATGAATTGATGGGAATAAGAAATGCTCAGGTAAGTGAAGGTAGGTATGTTTCGAGCGGGTCTAAGCGGAAACGTAAAGGACAGGCCACAGACAGTGGGGACGTACTTCGCACTGCGATTGAGTATGGAAATGAACAACTGAACTGCATTGCTGAATGGCCTATCCTACAACGTCAAGACGCTAGCCAAACACGTCAAGAGGTTGTCCCAGTTGGAGGCCATCCCTGA

Protein sequence

MLQRFDSRIKLLKRMFHAIAEMCGPTCSRFGWNDEQKCIVAEKEVFDNWVKSHPTAKGLLNKSFPHYDELSYVFGKDRATGGRAESFANIGLNDPAGYEPFAVDATPDTDFQPMYSQGLNMSPDELMGIRNAQVSEGRYVSSGSKRKRKGQATDSGDVLRTAIEYGNEQLNCIAEWPILQRQDASQTRQEVVPVGGHP

Homology

[Close]

BLAST of MELO3C035588.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 309.7 bits (792), Expect = 7.2e-81
Identity = 151/187 (80.75%), Postives = 164/187 (87.70%), Query Frame = 0


Query: 6   DSRIKLLKRMFHAIAEMCGPTCSRFGWNDEQKCIVAEKEVFDNWVKSHPTAKGLLNKSFP 65
           DSRIKL+KRMFHA+AEM GP CS FGWNDE+KCIVAEKEVFD+W  SHP AKGLLNKSF 
Sbjct: 422 DSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFV 481

Query: 66  HYDELSYVFGKDRATGGRAESFANIGLNDPAGYEPFAVDATPDTDFQPMYSQGLNMSPDE 125
           HYDELSYVFGKDRATGGRAESFA+IG NDP GY+  A DA PDTDF PMYS GLNMSPD+
Sbjct: 482 HYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDD 541

Query: 126 LMGIRNAQVSEGRYVSSGSKRKRKGQATDSGDVLRTAIEYGNEQLNCIAEWPILQRQDAS 185
           LM  R A+VSE R VSSGSKRKR G ATDSGD++RTAIEYGNEQL+ IAEWPILQRQDA+
Sbjct: 542 LMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDAT 601

Query: 186 QTRQEVV 193
           QTRQE+V
Sbjct: 602 QTRQEIV 606

[Close]

BLAST of MELO3C035588.2 vs. NCBI nr
Match: XP_008459131.1 (PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo])

HSP 1 Score: 281.2 bits (718), Expect = 2.8e-72
Identity = 140/186 (75.27%), Postives = 153/186 (82.26%), Query Frame = 0


Query: 6   DSRIKLLKRMFHAIAEMCGPTCSRFGWNDEQKCIVAEKEVFDNWVKSHPTAKGLLNKSFP 65
           DSRIKLLKRMFHA+AEM GP CS FGWNDE+KCIVAEKE       SHP AKGLLNKSF 
Sbjct: 63  DSRIKLLKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKE-------SHPAAKGLLNKSFV 122

Query: 66  HYDELSYVFGKDRATGGRAESFANIGLNDPAGYEPFAVDATPDTDFQPMYSQGLNMSPDE 125
           HYDELSYVFGKDRATGGRAE FA+IG NDPAGY+ F  DA PDT+F PMYS  LNMSPD+
Sbjct: 123 HYDELSYVFGKDRATGGRAEIFADIGSNDPAGYDAFVADAAPDTNFSPMYSPRLNMSPDD 182

Query: 126 LMGIRNAQVSEGRYVSSGSKRKRKGQATDSGDVLRTAIEYGNEQLNCIAEWPILQRQDAS 185
           LM  R A+VSE R VSSGS+RK  G ATDSGD++ TAI YGNEQL+ IAEWPILQRQDA+
Sbjct: 183 LMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRIAEWPILQRQDAT 241

Query: 186 QTRQEV 192
           QT QE+
Sbjct: 243 QTCQEI 241

[Close]

BLAST of MELO3C035588.2 vs. NCBI nr
Match: XP_008466949.1 (PREDICTED: uncharacterized protein LOC103504332, partial [Cucumis melo])

HSP 1 Score: 224.2 bits (570), Expect = 4.0e-55
Identity = 104/125 (83.20%), Postives = 111/125 (88.80%), Query Frame = 0


Query: 6   DSRIKLLKRMFHAIAEMCGPTCSRFGWNDEQKCIVAEKEVFDNWVKSHPTAKGLLNKSFP 65
           DSRIKL+KRMFHA+AEM GP CS FGWNDE+KCIVAEKEVFD+WVKSHPTAKGLLNKSF 
Sbjct: 63  DSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWVKSHPTAKGLLNKSFV 122

Query: 66  HYDELSYVFGKDRATGGRAESFANIGLNDPAGYEPFAVDATPDTDFQPMYSQGLNMSPDE 125
           HYDELSYVFGKDRATGGRAESFA+IG NDP GY+ FA DA PDTDF PMYS  LNMSPD+
Sbjct: 123 HYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAMPDTDFPPMYSLRLNMSPDD 182

Query: 126 LMGIR 131
           LM  R
Sbjct: 183 LMETR 187

[Close]

BLAST of MELO3C035588.2 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo])

HSP 1 Score: 213.8 bits (543), Expect = 5.4e-52
Identity = 101/188 (53.72%), Postives = 138/188 (73.40%), Query Frame = 0


Query: 6   DSRIKLLKRMFHAIAEMCGPTCSRFGWNDEQKCIVAEKEVFDNWVKSHPTAKGLLNKSFP 65
           D  +K LK+ +HAIAEM GP+CS FGWN+E +CI+AE+++FD+W+KSHP AKGLL+KSFP
Sbjct: 68  DCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFP 127

Query: 66  HYDELSYVFGKDRATGGRAESFANIGLNDPAGY-EPFAVDATPDTDFQPMYSQGLNMSPD 125
           +YD+LSYVFGKDRATG R+E+F N+G N    + +   +  + D D   MYSQG++MSPD
Sbjct: 128 YYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPD 187

Query: 126 ELMGIRNAQVSEGRYVSSGSKRKRKGQATDSGDVLRTAIEYGNEQLNCIAEWPILQRQDA 185
           E+ GIR  Q SE R  SS SKRKR  +  ++ +V+R+ +E+GNEQL  IA+WP  +R   
Sbjct: 188 EMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWPKEKRAME 247

Query: 186 SQTRQEVV 193
            + R +VV
Sbjct: 248 VEMRAQVV 255

[Close]

BLAST of MELO3C035588.2 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 184.1 bits (466), Expect = 4.6e-43
Identity = 93/186 (50.00%), Postives = 120/186 (64.52%), Query Frame = 0


Query: 6   DSRIKLLKRMFHAIAEMCGPTCSRFGWNDEQKCIVAEKEVFDNWVKSHPTAKGLLNKSFP 65
           D RIK LKR F AIAEM GP CS FGWNDE+KCIVAEKE+FDNWV+S P AKGLLN  FP
Sbjct: 385 DCRIKTLKRTFQAIAEMLGPACSGFGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFP 444

Query: 66  HYDELSYVFGKDRATGGRAESFANIGLNDP-AGYEPFAVDATPDTDFQPMYSQGLNMSPD 125
           +YDEL+YVFG+DRATG  AE+FA++G N+P  GY+ F +    + DF P+YS+G+++  D
Sbjct: 445 YYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDM-GDGNEDFPPVYSRGVDILQD 504

Query: 126 ELMGIRNAQVSEGRYVSSGSKRKRKGQATDSGDVLRTAIEYGNEQLNCIAEWPILQRQDA 185
           ++   R +             RKR  Q     + +  A++  NEQL  IAEWP     + 
Sbjct: 505 DVRASRPSXXXXXXXXXXXXXRKRGSQRDFDVEAIHLALDQTNEQLRQIAEWPARNLAND 564

Query: 186 SQTRQE 191
           +  R E
Sbjct: 565 NHVRTE 569

[Close]

BLAST of MELO3C035588.2 vs. TAIR10
Match: AT1G30140.1 (unknown protein)

HSP 1 Score: 59.3 bits (142), Expect = 3.1e-09
Identity = 31/92 (33.70%), Postives = 54/92 (58.70%), Query Frame = 0


Query: 3   QRFDSRIKLLKRMFHAIAEMCGPTCSRFGWNDEQKCIVAEKEVFDNWVKSHPTAKGLLNK 62
           + + SR+K LK ++ +  ++     S FGW+ E K   A  EV+ +++K+HP  K +  +
Sbjct: 64  KNYMSRLKFLKNLYQSYLDL-KRFSSGFGWDPETKKFTAPDEVWRDYLKAHPNHKHMQTE 123

Query: 63  SFPHYDELSYVFGKDRATGGRAESFANIGLND 95
           S  H+++L  +FG   ATG    SFA +G++D
Sbjct: 124 SIDHFEDLQIIFGDVVATG----SFA-VGMSD 149

[Close]

BLAST of MELO3C035588.2 vs. TAIR10
Match: AT2G24960.1 (unknown protein)

HSP 1 Score: 45.8 bits (107), Expect = 3.5e-05
Identity = 28/114 (24.56%), Postives = 49/114 (42.98%), Query Frame = 0


Query: 4   RFDSRIKLLKRMFHAIAEMCGPTCSRFGWNDEQKCIVAEKEVFDNWVKSHPTAKGLLNKS 63
           R++  +K  K M   + E        F W++ +  I A+  V+D+++K HP A+    KS
Sbjct: 226 RYNKLLKYYKDMEAILKE------DGFSWDETRLMISADDAVWDSYIKDHPLARTYRMKS 285

Query: 64  FPHYDELSYVF------GKDRATGGRAESFANIGLNDPAGYEPFAVDATPDTDF 112
            P Y++L  +F      G D    G A   +    +     +   +  TP  D+
Sbjct: 286 LPSYNDLDTIFACQAEQGTDHRDDGSAAQTSETKASQEQNSDRTRIFWTPPMDY 333

[Close]

BLAST of MELO3C035588.2 vs. TAIR10
Match: AT4G02210.1 (unknown protein)

HSP 1 Score: 44.7 bits (104), Expect = 7.9e-05
Identity = 22/82 (26.83%), Postives = 42/82 (51.22%), Query Frame = 0


Query: 7   SRIKLLKRMFHAIAEMCGPTCSRFGWNDEQKCIVAEKEVFDNWVKSHPTAKGLLNKSFPH 66
           +R K L+ +F ++  +       F W+D ++ +VA+  V+D ++K HP ++    KS P 
Sbjct: 68  NRHKTLRNLFKSVNNLL--IEDGFSWDDTRQMVVADNCVWDEYLKIHPDSRSFRIKSIPC 127

Query: 67  YDELSYVFGKDRATGGRAESFA 89
           Y +L  V+    +     ES +
Sbjct: 128 YKDLCLVYSDGMSEHKAEESIS 147

[Close]

BLAST of MELO3C035588.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 4.8e-81
Identity = 151/187 (80.75%), Postives = 164/187 (87.70%), Query Frame = 0


Query: 6   DSRIKLLKRMFHAIAEMCGPTCSRFGWNDEQKCIVAEKEVFDNWVKSHPTAKGLLNKSFP 65
           DSRIKL+KRMFHA+AEM GP CS FGWNDE+KCIVAEKEVFD+W  SHP AKGLLNKSF 
Sbjct: 422 DSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFV 481

Query: 66  HYDELSYVFGKDRATGGRAESFANIGLNDPAGYEPFAVDATPDTDFQPMYSQGLNMSPDE 125
           HYDELSYVFGKDRATGGRAESFA+IG NDP GY+  A DA PDTDF PMYS GLNMSPD+
Sbjct: 482 HYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDD 541

Query: 126 LMGIRNAQVSEGRYVSSGSKRKRKGQATDSGDVLRTAIEYGNEQLNCIAEWPILQRQDAS 185
           LM  R A+VSE R VSSGSKRKR G ATDSGD++RTAIEYGNEQL+ IAEWPILQRQDA+
Sbjct: 542 LMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDAT 601

Query: 186 QTRQEVV 193
           QTRQE+V
Sbjct: 602 QTRQEIV 606

[Close]

BLAST of MELO3C035588.2 vs. TrEMBL
Match: tr|A0A1S3C8Z4|A0A1S3C8Z4_CUCME (uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.8e-72
Identity = 140/186 (75.27%), Postives = 153/186 (82.26%), Query Frame = 0


Query: 6   DSRIKLLKRMFHAIAEMCGPTCSRFGWNDEQKCIVAEKEVFDNWVKSHPTAKGLLNKSFP 65
           DSRIKLLKRMFHA+AEM GP CS FGWNDE+KCIVAEKE       SHP AKGLLNKSF 
Sbjct: 63  DSRIKLLKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKE-------SHPAAKGLLNKSFV 122

Query: 66  HYDELSYVFGKDRATGGRAESFANIGLNDPAGYEPFAVDATPDTDFQPMYSQGLNMSPDE 125
           HYDELSYVFGKDRATGGRAE FA+IG NDPAGY+ F  DA PDT+F PMYS  LNMSPD+
Sbjct: 123 HYDELSYVFGKDRATGGRAEIFADIGSNDPAGYDAFVADAAPDTNFSPMYSPRLNMSPDD 182

Query: 126 LMGIRNAQVSEGRYVSSGSKRKRKGQATDSGDVLRTAIEYGNEQLNCIAEWPILQRQDAS 185
           LM  R A+VSE R VSSGS+RK  G ATDSGD++ TAI YGNEQL+ IAEWPILQRQDA+
Sbjct: 183 LMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRIAEWPILQRQDAT 241

Query: 186 QTRQEV 192
           QT QE+
Sbjct: 243 QTCQEI 241

[Close]

BLAST of MELO3C035588.2 vs. TrEMBL
Match: tr|A0A1S3CTN6|A0A1S3CTN6_CUCME (uncharacterized protein LOC103504332 OS=Cucumis melo OX=3656 GN=LOC103504332 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.6e-55
Identity = 104/125 (83.20%), Postives = 111/125 (88.80%), Query Frame = 0


Query: 6   DSRIKLLKRMFHAIAEMCGPTCSRFGWNDEQKCIVAEKEVFDNWVKSHPTAKGLLNKSFP 65
           DSRIKL+KRMFHA+AEM GP CS FGWNDE+KCIVAEKEVFD+WVKSHPTAKGLLNKSF 
Sbjct: 63  DSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWVKSHPTAKGLLNKSFV 122

Query: 66  HYDELSYVFGKDRATGGRAESFANIGLNDPAGYEPFAVDATPDTDFQPMYSQGLNMSPDE 125
           HYDELSYVFGKDRATGGRAESFA+IG NDP GY+ FA DA PDTDF PMYS  LNMSPD+
Sbjct: 123 HYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAMPDTDFPPMYSLRLNMSPDD 182

Query: 126 LMGIR 131
           LM  R
Sbjct: 183 LMETR 187

[Close]

BLAST of MELO3C035588.2 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 3.6e-52
Identity = 101/188 (53.72%), Postives = 138/188 (73.40%), Query Frame = 0


Query: 6   DSRIKLLKRMFHAIAEMCGPTCSRFGWNDEQKCIVAEKEVFDNWVKSHPTAKGLLNKSFP 65
           D  +K LK+ +HAIAEM GP+CS FGWN+E +CI+AE+++FD+W+KSHP AKGLL+KSFP
Sbjct: 68  DCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFP 127

Query: 66  HYDELSYVFGKDRATGGRAESFANIGLNDPAGY-EPFAVDATPDTDFQPMYSQGLNMSPD 125
           +YD+LSYVFGKDRATG R+E+F N+G N    + +   +  + D D   MYSQG++MSPD
Sbjct: 128 YYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPD 187

Query: 126 ELMGIRNAQVSEGRYVSSGSKRKRKGQATDSGDVLRTAIEYGNEQLNCIAEWPILQRQDA 185
           E+ GIR  Q SE R  SS SKRKR  +  ++ +V+R+ +E+GNEQL  IA+WP  +R   
Sbjct: 188 EMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWPKEKRAME 247

Query: 186 SQTRQEVV 193
            + R +VV
Sbjct: 248 VEMRAQVV 255

[Close]

BLAST of MELO3C035588.2 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.0e-43
Identity = 93/186 (50.00%), Postives = 120/186 (64.52%), Query Frame = 0


Query: 6   DSRIKLLKRMFHAIAEMCGPTCSRFGWNDEQKCIVAEKEVFDNWVKSHPTAKGLLNKSFP 65
           D RIK LKR F AIAEM GP CS FGWNDE+KCIVAEKE+FDNWV+S P AKGLLN  FP
Sbjct: 385 DCRIKTLKRTFQAIAEMLGPACSGFGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFP 444

Query: 66  HYDELSYVFGKDRATGGRAESFANIGLNDP-AGYEPFAVDATPDTDFQPMYSQGLNMSPD 125
           +YDEL+YVFG+DRATG  AE+FA++G N+P  GY+ F +    + DF P+YS+G+++  D
Sbjct: 445 YYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDM-GDGNEDFPPVYSRGVDILQD 504

Query: 126 ELMGIRNAQVSEGRYVSSGSKRKRKGQATDSGDVLRTAIEYGNEQLNCIAEWPILQRQDA 185
           ++   R +             RKR  Q     + +  A++  NEQL  IAEWP     + 
Sbjct: 505 DVRASRPSXXXXXXXXXXXXXRKRGSQRDFDVEAIHLALDQTNEQLRQIAEWPARNLAND 564

Query: 186 SQTRQE 191
           +  R E
Sbjct: 565 NHVRTE 569

The following BLAST results are available for this feature:

BLAST of MELO3C035588.2 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN34114.1	7.2e-81	80.75	retrotransposon protein [Cucumis melo subsp. melo]	[more]
XP_008459131.1	2.8e-72	75.27	PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo]	[more]
XP_008466949.1	4.0e-55	83.20	PREDICTED: uncharacterized protein LOC103504332, partial [Cucumis melo]	[more]
XP_008441954.1	5.4e-52	53.72	PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]	[more]
ADN33754.1	4.6e-43	50.00	retrotransposon protein [Cucumis melo subsp. melo]	[more]

BLAST of MELO3C035588.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G30140.1	3.1e-09	33.70	unknown protein	[more]
AT2G24960.1	3.5e-05	24.56	unknown protein	[more]
AT4G02210.1	7.9e-05	26.83	unknown protein	[more]

BLAST of MELO3C035588.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C035588.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|E5GCB5\|E5GCB5_CUCME	4.8e-81	80.75	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S3C8Z4\|A0A1S3C8Z4_CUCME	1.8e-72	75.27	uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=...	[more]
tr\|A0A1S3CTN6\|A0A1S3CTN6_CUCME	2.6e-55	83.20	uncharacterized protein LOC103504332 OS=Cucumis melo OX=3656 GN=LOC103504332 PE=...	[more]
tr\|A0A1S3B4L3\|A0A1S3B4L3_CUCME	3.6e-52	53.72	uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=...	[more]
tr\|E5GBB2\|E5GBB2_CUCME	3.0e-43	50.00	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035588.2.1	MELO3C035588.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31704	FAMILY NOT NAMED	coord: 6..89
None	No IPR available	PANTHER	PTHR31704:SF62	SUBFAMILY NOT NAMED	coord: 6..89

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C035588.2	Cucumber (Chinese Long) v3	cucmedB009
MELO3C035588.2	Watermelon (97103) v2	medwmbB132
MELO3C035588.2	Wax gourd	medwgoB176
MELO3C035588.2	Cucumber (Gy14) v2	cgybmedB009
MELO3C035588.2	Cucumber (Gy14) v1	cgymedB361
MELO3C035588.2	Cucurbita maxima (Rimu)	cmamedB215
MELO3C035588.2	Cucurbita moschata (Rifu)	cmomedB203
MELO3C035588.2	Wild cucumber (PI 183967)	cpimedB011
MELO3C035588.2	Cucumber (Chinese Long) v2	cumedB010
MELO3C035588.2	Bottle gourd (USVL1VR-Ls)	lsimedB255
MELO3C035588.2	Watermelon (Charleston Gray)	medwcgB133
MELO3C035588.2	Watermelon (97103) v1	medwmB167