MELO3C035556.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C035556.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionsubtilisin-like protease SBT3.17 isoform X1
Locationchr12 : 9309455 .. 9310110 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGATGGAAACGAGGAGTTCCCGTCCGTGTACAGCCAGGGGATTGACCTGTCACAGGACGATGTACGCGCCTCACGACCTTCTCGCGGTTCAGAGGGTAGAACCGAATCGAGTGGATCCAAAAGGAAGAGGGGAAGTCAGCGAGAGGAGGATGTTGAAGGCATACATCTAGAAATTGACCAAACGAACGAGCAACTCAGAATGATTGCGGAGTGGCCTACACGCGCCCTTGCCAATGACAACCATGTGCGCACGGAATTCTTCCGCATATTGCGTGAGATGCCGGAACTAACGAGTTTGGATAGAGCGCTATTGCAAAGGCATCTTCTGTCTCATATGGACGACCTTTGGGGTTTCGTGCTCATGCCTGAGGATGAGAGGGGGGATTTTGTAGAGTCCTCCTACGAGACATCACGAGATAGTTTATGTTTGTACCGACCTGGGTTGCTTCTTATTTGCTTACTTTTTTTTTTTTGTATGATGTTCACTGTTTATGCTTTTGCTATTGTAGACAACTATTTTTTTTCCTTCATAATGTTTATTTAAAATTAAGAAAAATAGTCACAATTTCACCCACGCGTTATAACAGGTAATTATATATGTTCAAAATAGGGGGACATCGCTACCGCCAATTACAAATAGGAAATAATTAA

mRNA sequence

ATGGCAGATGGAAACGAGGAGTTCCCGTCCGTGTACAGCCAGGGGATTGACCTGTCACAGGACGATGTACGCGCCTCACGACCTTCTCGCGGTTCAGAGGGTAGAACCGAATCGAGTGGATCCAAAAGGAAGAGGGGAAGTCAGCGAGAGGAGGATGTTGAAGGCATACATCTAGAAATTGACCAAACGAACGAGCAACTCAGAATGATTGCGGAGTGGCCTACACGCGCCCTTGCCAATGACAACCATGTGCGCACGGAATTCTTCCGCATATTGCGTGAGATGCCGGAACTAACGAGTTTGGATAGAGCGCTATTGCAAAGGCATCTTCTGTCTCATATGGACGACCTTTGGGGTTTCGTGCTCATGCCTGAGGATGAGAGGGGGGATTTTGTAGAGTCCTCCTACGAGACATCACGAGATAGGGGACATCGCTACCGCCAATTACAAATAGGAAATAATTAA

Coding sequence (CDS)

ATGGCAGATGGAAACGAGGAGTTCCCGTCCGTGTACAGCCAGGGGATTGACCTGTCACAGGACGATGTACGCGCCTCACGACCTTCTCGCGGTTCAGAGGGTAGAACCGAATCGAGTGGATCCAAAAGGAAGAGGGGAAGTCAGCGAGAGGAGGATGTTGAAGGCATACATCTAGAAATTGACCAAACGAACGAGCAACTCAGAATGATTGCGGAGTGGCCTACACGCGCCCTTGCCAATGACAACCATGTGCGCACGGAATTCTTCCGCATATTGCGTGAGATGCCGGAACTAACGAGTTTGGATAGAGCGCTATTGCAAAGGCATCTTCTGTCTCATATGGACGACCTTTGGGGTTTCGTGCTCATGCCTGAGGATGAGAGGGGGGATTTTGTAGAGTCCTCCTACGAGACATCACGAGATAGGGGACATCGCTACCGCCAATTACAAATAGGAAATAATTAA

Protein sequence

MADGNEEFPSVYSQGIDLSQDDVRASRPSRGSEGRTESSGSKRKRGSQREEDVEGIHLEIDQTNEQLRMIAEWPTRALANDNHVRTEFFRILREMPELTSLDRALLQRHLLSHMDDLWGFVLMPEDERGDFVESSYETSRDRGHRYRQLQIGNN
Homology
[Close]
BLAST of MELO3C035556.2 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 190.7 bits (483), Expect = 3.8e-45
Identity = 99/131 (75.57%), Postives = 105/131 (80.15%), Query Frame = 0 

Query: 1   MADGNEEFPSVYSQGIDLSQDDVRASRPSRGSEGRTESSGSKRKRGSQREEDVEGIHLEI 60
           M DGNE+FP VYS+G+D+ QDDVRASRPS             RKRGSQR+ DVE IHL +
Sbjct: 483 MGDGNEDFPPVYSRGVDILQDDVRASRPSXXXXXXXXXXXXXRKRGSQRDFDVEAIHLAL 542

Query: 61  DQTNEQLRMIAEWPTRALANDNHVRTEFFRILREMPELTSLDRALLQRHLLSHMDDLWGF 120
           DQTNEQLR IAEWP R LANDNHVRTEFFRILREMPELTSLDRALLQRHLLS MDDL GF
Sbjct: 543 DQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGF 602

Query: 121 VLMPEDERGDF 132
           VLMPEDER  F
Sbjct: 603 VLMPEDEREGF 613

[Close]
BLAST of MELO3C035556.2 vs. NCBI nr
Match: XP_016900897.1 (PREDICTED: uncharacterized protein LOC103491960 [Cucumis melo] >XP_016900898.1 PREDICTED: uncharacterized protein LOC103491960 [Cucumis melo])

HSP 1 Score: 87.0 bits (214), Expect = 5.9e-14
Identity = 50/85 (58.82%), Postives = 62/85 (72.94%), Query Frame = 0 

Query: 1   MADGNE-EFPSVYSQGIDLSQDDVRASRPSRGSEGRTESSGSKRKRGSQREEDVEGIHLE 60
           M+D N+ EFP +YSQ I +SQDDVRASRP   S+ RT SSGSK+KR SQ E ++E IH+ 
Sbjct: 46  MSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKQKRESQWEGEIEMIHMA 105

Query: 61  IDQTNEQLRMIAEWPTRALANDNHV 85
           ++  N+QLR I EW  RALAND  V
Sbjct: 106 LECANDQLRTIVEWSARALANDTTV 130

[Close]
BLAST of MELO3C035556.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 85.9 bits (211), Expect = 1.3e-13
Identity = 48/119 (40.34%), Postives = 70/119 (58.82%), Query Frame = 0 

Query: 7   EFPSVYSQGIDLSQDDVRASRPSRGSEGRTESSGSKRKRGSQREEDVEGIHLEIDQTNEQ 66
           +FP +YS G+++S DD+  +R +R SE R  SSGSKRKR     +  + +   I+  NEQ
Sbjct: 524 DFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQ 583

Query: 67  LRMIAEWPTRALANDNHVRTEFFRILREMPELTSLDRALLQRHLLSHMDDLWGFVLMPE 126
           L  IAEWP     +    R E  R L  +PELT +DR  L R L+ ++DD+  F+ +P+
Sbjct: 584 LHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPD 642

[Close]
BLAST of MELO3C035556.2 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo])

HSP 1 Score: 84.7 bits (208), Expect = 2.9e-13
Identity = 48/122 (39.34%), Postives = 77/122 (63.11%), Query Frame = 0 

Query: 5   NEEFPSVYSQGIDLSQDDVRASRPSRGSEGRTESSGSKRKRGSQREEDVEGIHLEIDQTN 64
           +E+ P++YSQG+ +S D++   R  + SE R  SS SKRKRGS+R E VE I   ++  N
Sbjct: 171 DEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGN 230

Query: 65  EQLRMIAEWPTRALANDNHVRTEFFRILREMPELTSLDRALLQRHLLSHMDDLWGFVLMP 124
           EQL+ IA+WP    A +  +R +  + L+++P+L S DRA L + L   ++ + GF+ +P
Sbjct: 231 EQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIP 290

Query: 125 ED 127
            +
Sbjct: 291 TE 292

[Close]
BLAST of MELO3C035556.2 vs. NCBI nr
Match: KGN46631.1 (hypothetical protein Csa_6G116150 [Cucumis sativus])

HSP 1 Score: 73.9 bits (180), Expect = 5.2e-10
Identity = 44/114 (38.60%), Postives = 67/114 (58.77%), Query Frame = 0 

Query: 11  VYSQGIDLSQDDVRASRPSRGSEGRTESSGSKRKRGSQREEDVEGIHLEIDQTNEQLRMI 70
           +YSQG+D+  D++  +R S  SEGR  SSGSKRK G Q  E V+ I  E++  N+QL+ I
Sbjct: 1   MYSQGLDMPPDEMLGTRQS--SEGRNCSSGSKRKHGGQHYEAVDVISNEMEVRNDQLKAI 60

Query: 71  AEWPTRALANDNHVRTEFFRILREMPELTSLDRALLQRHLLSHMDDLWGFVLMP 125
           A W     A +  +  E  + L+++ EL + DR  L + +   +DD+ GF+  P
Sbjct: 61  ANWSKEKRATEVELHVEVVKQLQDISELRTRDRVKLMQIIFHMVDDIEGFLSCP 112

[Close]
BLAST of MELO3C035556.2 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.5e-45
Identity = 99/131 (75.57%), Postives = 105/131 (80.15%), Query Frame = 0 

Query: 1   MADGNEEFPSVYSQGIDLSQDDVRASRPSRGSEGRTESSGSKRKRGSQREEDVEGIHLEI 60
           M DGNE+FP VYS+G+D+ QDDVRASRPS             RKRGSQR+ DVE IHL +
Sbjct: 483 MGDGNEDFPPVYSRGVDILQDDVRASRPSXXXXXXXXXXXXXRKRGSQRDFDVEAIHLAL 542

Query: 61  DQTNEQLRMIAEWPTRALANDNHVRTEFFRILREMPELTSLDRALLQRHLLSHMDDLWGF 120
           DQTNEQLR IAEWP R LANDNHVRTEFFRILREMPELTSLDRALLQRHLLS MDDL GF
Sbjct: 543 DQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGF 602

Query: 121 VLMPEDERGDF 132
           VLMPEDER  F
Sbjct: 603 VLMPEDEREGF 613

[Close]
BLAST of MELO3C035556.2 vs. TrEMBL
Match: tr|A0A1S4DY48|A0A1S4DY48_CUCME (uncharacterized protein LOC103491960 OS=Cucumis melo OX=3656 GN=LOC103491960 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.9e-14
Identity = 50/85 (58.82%), Postives = 62/85 (72.94%), Query Frame = 0 

Query: 1   MADGNE-EFPSVYSQGIDLSQDDVRASRPSRGSEGRTESSGSKRKRGSQREEDVEGIHLE 60
           M+D N+ EFP +YSQ I +SQDDVRASRP   S+ RT SSGSK+KR SQ E ++E IH+ 
Sbjct: 46  MSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKQKRESQWEGEIEMIHMA 105

Query: 61  IDQTNEQLRMIAEWPTRALANDNHV 85
           ++  N+QLR I EW  RALAND  V
Sbjct: 106 LECANDQLRTIVEWSARALANDTTV 130

[Close]
BLAST of MELO3C035556.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 8.7e-14
Identity = 48/119 (40.34%), Postives = 70/119 (58.82%), Query Frame = 0 

Query: 7   EFPSVYSQGIDLSQDDVRASRPSRGSEGRTESSGSKRKRGSQREEDVEGIHLEIDQTNEQ 66
           +FP +YS G+++S DD+  +R +R SE R  SSGSKRKR     +  + +   I+  NEQ
Sbjct: 524 DFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQ 583

Query: 67  LRMIAEWPTRALANDNHVRTEFFRILREMPELTSLDRALLQRHLLSHMDDLWGFVLMPE 126
           L  IAEWP     +    R E  R L  +PELT +DR  L R L+ ++DD+  F+ +P+
Sbjct: 584 LHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPD 642

[Close]
BLAST of MELO3C035556.2 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.9e-13
Identity = 48/122 (39.34%), Postives = 77/122 (63.11%), Query Frame = 0 

Query: 5   NEEFPSVYSQGIDLSQDDVRASRPSRGSEGRTESSGSKRKRGSQREEDVEGIHLEIDQTN 64
           +E+ P++YSQG+ +S D++   R  + SE R  SS SKRKRGS+R E VE I   ++  N
Sbjct: 171 DEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGN 230

Query: 65  EQLRMIAEWPTRALANDNHVRTEFFRILREMPELTSLDRALLQRHLLSHMDDLWGFVLMP 124
           EQL+ IA+WP    A +  +R +  + L+++P+L S DRA L + L   ++ + GF+ +P
Sbjct: 231 EQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIP 290

Query: 125 ED 127
            +
Sbjct: 291 TE 292

[Close]
BLAST of MELO3C035556.2 vs. TrEMBL
Match: tr|A0A0A0KFW0|A0A0A0KFW0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G116150 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.4e-10
Identity = 44/114 (38.60%), Postives = 67/114 (58.77%), Query Frame = 0 

Query: 11  VYSQGIDLSQDDVRASRPSRGSEGRTESSGSKRKRGSQREEDVEGIHLEIDQTNEQLRMI 70
           +YSQG+D+  D++  +R S  SEGR  SSGSKRK G Q  E V+ I  E++  N+QL+ I
Sbjct: 1   MYSQGLDMPPDEMLGTRQS--SEGRNCSSGSKRKHGGQHYEAVDVISNEMEVRNDQLKAI 60

Query: 71  AEWPTRALANDNHVRTEFFRILREMPELTSLDRALLQRHLLSHMDDLWGFVLMP 125
           A W     A +  +  E  + L+++ EL + DR  L + +   +DD+ GF+  P
Sbjct: 61  ANWSKEKRATEVELHVEVVKQLQDISELRTRDRVKLMQIIFHMVDDIEGFLSCP 112

The following BLAST results are available for this feature:
BLAST of MELO3C035556.2 vs. NCBI nr
Match NameE-valueIdentityDescription
ADN33754.13.8e-4575.57retrotransposon protein [Cucumis melo subsp. melo][more]
XP_016900897.15.9e-1458.82PREDICTED: uncharacterized protein LOC103491960 [Cucumis melo] >XP_016900898.1 P... [more]
ADN34114.11.3e-1340.34retrotransposon protein [Cucumis melo subsp. melo][more]
XP_008441954.12.9e-1339.34PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo][more]
KGN46631.15.2e-1038.60hypothetical protein Csa_6G116150 [Cucumis sativus][more]
BLAST of MELO3C035556.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C035556.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C035556.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|E5GBB2|E5GBB2_CUCME2.5e-4575.57Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S4DY48|A0A1S4DY48_CUCME3.9e-1458.82uncharacterized protein LOC103491960 OS=Cucumis melo OX=3656 GN=LOC103491960 PE=... [more]
tr|E5GCB5|E5GCB5_CUCME8.7e-1440.34Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S3B4L3|A0A1S3B4L3_CUCME1.9e-1339.34uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=... [more]
tr|A0A0A0KFW0|A0A0A0KFW0_CUCSA3.4e-1038.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G116150 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0008233 peptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035556.2.1MELO3C035556.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..59

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C035556.2Wax gourdmedwgoB176
MELO3C035556.2Cucumber (Gy14) v2cgybmedB009
MELO3C035556.2Cucumber (Gy14) v1cgymedB361
MELO3C035556.2Cucurbita maxima (Rimu)cmamedB161
MELO3C035556.2Cucurbita maxima (Rimu)cmamedB215
MELO3C035556.2Cucurbita moschata (Rifu)cmomedB151
MELO3C035556.2Cucurbita moschata (Rifu)cmomedB203
MELO3C035556.2Cucurbita pepo (Zucchini)cpemedB563
MELO3C035556.2Cucurbita pepo (Zucchini)cpemedB881
MELO3C035556.2Wild cucumber (PI 183967)cpimedB011
MELO3C035556.2Cucumber (Chinese Long) v2cumedB010
MELO3C035556.2Bottle gourd (USVL1VR-Ls)lsimedB255
MELO3C035556.2Watermelon (97103) v1medwmB165
MELO3C035556.2Silver-seed gourdcarmedB0174
MELO3C035556.2Cucumber (Chinese Long) v3cucmedB009
MELO3C035556.2Watermelon (97103) v2medwmbB127