MELO3C035550.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C035550.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Late embryogenesis abundant protein
Location	chr12 : 8758888 .. 8760430 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATCAAAACTTCCTAAAAGTAAAAAAGTGGTGAAAAGAAAAACAGATGAGGAGCATTGCTACACAAGGAGAACCATCATCATCATCAGCAAAAGAAATATCCTATGTAGAAAAACATGGGGCCGCAAAAAGAACAAGGGTGTTGAGAATCACAGGAAGAACCTTATTGGGTTTAATGATTCTCGTTGCTATCGCAATGATTATATGTTGGCTTATTGTGTTTCCCAGAAACCCAGATCTCATTGTGGAAACTGGCAAAGTTATACCCCATAGTTTAACTGATAGAAAGTTGAATGCTACCATAGCTTTTACTGTTACAAGCTATAACCCTAACAAAAAAGCCTCCATTCGTATGGATTCTATGAGAATGATAGTTACTGATATGGGGTTGTCCTTTTGGTCCGACATCCCTAGCTTCACCCAGCCACCGAAAAACAAAACCGTCTTGAACTCCACCATCCAAGGCAACTTCATATACCCATTTGGGCACATGAAAGAATTGGTGAAGTTGGAGGGGATCAGTCCGGATCTTCGCTTCTCGGCTAAAGTCAGGTACAAACATTTGACTCTATGTTTTATTGATTTCCATTTTTTTTTTATTTAGTCCTACGATTTTAAAAAAAATATCTTAAATTTAGTACCTCAAACTTAATTCCTACGAATTTGGTTAAATATCAACAATAGTTTCCATTCATGAAAGTGTGAATTTCTATGTTTTCAAAAAATTTAATAAAAATGTTAATATATAACAAAATGTTTTTTCAAAAAAATCAACAATAAACTAGGAGGGAGAGATTAAATTTAAGATTTATAGTATGCACACAAACTAAAATTAGACAATTGAAATTACAAGAGCTACAATCAAACAAACCGACCAAAATTGTATTTCAACATTTTTATTTCTAACTTAAAATTATTTTTTAGTTGAGAGTTCAAATGAACAATAACTTTATTTTGCCTCAATTTAAACCTAATACCTTAGTTTCCTTTTTTACGATTTAGCCTAAAGTACTACCATGATGACTATTTTTTGGTTTTGTTTTAGATTGATAATGAAGCTCATGGATATTACTTTTACAATATACATATATTTTTTATTTATAAATGTTTTCATAAGCTAATTAAGTTATTTTTTAGTTTTTTAATATATAGTTTTTGTTGTAAATTAAACATTTTTTGTTGTGTGTCCTTATCAGTTACATTATGGAGAGATGGACATCGAGAGGTCGATTGTTGGAGGTCTACTGTGATAGCCTTAGGCTTAAGTTCAATGATTCTACAGTTTTTGATAATAAAAAATGCAAAGTTGATCTATAAATTTTCATCTTGTTGTGTTCTTCTTGCTCAATAATGATCCCAAAGATTTGTAACTCAAAATTTAAATTGTGTTATTTTTATGAATAGAGAGAGTTGATCTTGTAATTACTTCTTCTTAGTTTTTTGGATGATCATGATTTGTGTTTGAATAATAATGTAGAAAAATGGTATGGAAGATTTGAAAGATCAGGTTGAGGGAATTAGAGTTTGGTTTTGGAAGAGTTGA

mRNA sequence

ATATCAAAACTTCCTAAAAGTAAAAAAGTGGTGAAAAGAAAAACAGATGAGGAGCATTGCTACACAAGGAGAACCATCATCATCATCAGCAAAAGAAATATCCTATGTAGAAAAACATGGGGCCGCAAAAAGAACAAGGGTGTTGAGAATCACAGGAAGAACCTTATTGGGTTTAATGATTCTCGTTGCTATCGCAATGATTATATGTTGGCTTATTGTGTTTCCCAGAAACCCAGATCTCATTGTGGAAACTGGCAAAGTTATACCCCATAGTTTAACTGATAGAAAGTTGAATGCTACCATAGCTTTTACTGTTACAAGCTATAACCCTAACAAAAAAGCCTCCATTCGTATGGATTCTATGAGAATGATAGTTACTGATATGGGGTTGTCCTTTTGGTCCGACATCCCTAGCTTCACCCAGCCACCGAAAAACAAAACCGTCTTGAACTCCACCATCCAAGGCAACTTCATATACCCATTTGGGCACATGAAAGAATTGGTGAAGTTGGAGGGGATCAGTCCGGATCTTCGCTTCTCGGCTAAAGTCAGTTACATTATGGAGAGATGGACATCGAGAGGTCGATTGTTGGAGGTCTACTGTGATAGCCTTAGGCTTAAGTTCAATGATTCTACAAAAAATGGTATGGAAGATTTGAAAGATCAGGTTGAGGGAATTAGAGTTTGGTTTTGGAAGAGTTGA

Coding sequence (CDS)

ATGAGGAGCATTGCTACACAAGGAGAACCATCATCATCATCAGCAAAAGAAATATCCTATGTAGAAAAACATGGGGCCGCAAAAAGAACAAGGGTGTTGAGAATCACAGGAAGAACCTTATTGGGTTTAATGATTCTCGTTGCTATCGCAATGATTATATGTTGGCTTATTGTGTTTCCCAGAAACCCAGATCTCATTGTGGAAACTGGCAAAGTTATACCCCATAGTTTAACTGATAGAAAGTTGAATGCTACCATAGCTTTTACTGTTACAAGCTATAACCCTAACAAAAAAGCCTCCATTCGTATGGATTCTATGAGAATGATAGTTACTGATATGGGGTTGTCCTTTTGGTCCGACATCCCTAGCTTCACCCAGCCACCGAAAAACAAAACCGTCTTGAACTCCACCATCCAAGGCAACTTCATATACCCATTTGGGCACATGAAAGAATTGGTGAAGTTGGAGGGGATCAGTCCGGATCTTCGCTTCTCGGCTAAAGTCAGTTACATTATGGAGAGATGGACATCGAGAGGTCGATTGTTGGAGGTCTACTGTGATAGCCTTAGGCTTAAGTTCAATGATTCTACAAAAAATGGTATGGAAGATTTGAAAGATCAGGTTGAGGGAATTAGAGTTTGGTTTTGGAAGAGTTGA

Protein sequence

MRSIATQGEPSSSSAKEISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDLIVETGKVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWSDIPSFTQPPKNKTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRGRLLEVYCDSLRLKFNDSTKNGMEDLKDQVEGIRVWFWKS

Homology

[Close]

BLAST of MELO3C035550.2 vs. NCBI nr
Match: XP_008462326.1 (PREDICTED: uncharacterized protein LOC103500702 [Cucumis melo])

HSP 1 Score: 389.4 bits (999), Expect = 7.9e-105
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MRSIATQGEPSSSSAKEISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFP 60
           MRSIATQGEPSSSSAKEISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFP
Sbjct: 1   MRSIATQGEPSSSSAKEISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFP 60

Query: 61  RNPDLIVETGKVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWSD 120
           RNPDLIVETGKVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWSD
Sbjct: 61  RNPDLIVETGKVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWSD 120

Query: 121 IPSFTQPPKNKTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRGR 180
           IPSFTQPPKNKTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRGR
Sbjct: 121 IPSFTQPPKNKTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRGR 180

Query: 181 LLEVYCDSLRLKFNDST 198
           LLEVYCDSLRLKFNDST
Sbjct: 181 LLEVYCDSLRLKFNDST 197

[Close]

BLAST of MELO3C035550.2 vs. NCBI nr
Match: XP_004139454.1 (PREDICTED: uncharacterized protein LOC101218532 [Cucumis sativus] >KGN64868.1 hypothetical protein Csa_1G134270 [Cucumis sativus])

HSP 1 Score: 341.7 bits (875), Expect = 1.9e-90
Identity = 169/180 (93.89%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 18  ISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDLIVETGKVIPHSL 77
           +SYV KHG AKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPD+IVETG+VIPHSL
Sbjct: 22  MSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSL 81

Query: 78  TDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWSDIPSFTQPPKNKTVLNST 137
           TDRKLNATIAFTVTSYNPNKKASIRMDSMRMIV+DMGLSFWSDIPSFTQPPKNKTVL ST
Sbjct: 82  TDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKNKTVLTST 141

Query: 138 IQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRGRLLEVYCDSLRLKFNDST 197
           IQGNFIYPFGHMKEL+KLEGISP+LRFSAKVSYIMERWTSR RL+EVYCDSLRLKFNDST
Sbjct: 142 IQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFNDST 201

[Close]

BLAST of MELO3C035550.2 vs. NCBI nr
Match: XP_023520091.1 (uncharacterized protein At1g08160-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246.5 bits (628), Expect = 8.3e-62
Identity = 118/198 (59.60%), Postives = 155/198 (78.28%), Query Frame = 0


Query: 6   TQGEPSSSSA------KEISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVF 65
           TQGE SSS+       K  SY  +HG AKRT+++RI GR+LL +M LV +A++ICWL+VF
Sbjct: 5   TQGEASSSTTSIIEAPKPSSYGHQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVF 64

Query: 66  PRNPDLIVETGKVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWS 125
           P+ P+LI+E G V PHSLTDRKLNA+I+FT+ SYNPNK+ASI MDSM+M + DMG +F +
Sbjct: 65  PKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFTT 124

Query: 126 DIPSFTQPPKNKTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRG 185
            IP+FTQPP N+T LN T++ NFIYPFG MK+L+  +G++P+L FSA VSYI+E+W S+ 
Sbjct: 125 TIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKWASKR 184

Query: 186 RLLEVYCDSLRLKFNDST 198
           R LE+YCD +RLK N ST
Sbjct: 185 RSLEIYCDRVRLKINGST 202

[Close]

BLAST of MELO3C035550.2 vs. NCBI nr
Match: XP_022964992.1 (uncharacterized protein At1g08160-like [Cucurbita moschata])

HSP 1 Score: 243.8 bits (621), Expect = 5.4e-61
Identity = 117/198 (59.09%), Postives = 155/198 (78.28%), Query Frame = 0


Query: 6   TQGEPSSSSA------KEISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVF 65
           TQ E SSS+       K  SY ++HG AKRT+++RI GR+LL +M LV +A++ICWL+VF
Sbjct: 5   TQEEASSSTTSIIEAPKPSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVF 64

Query: 66  PRNPDLIVETGKVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWS 125
           P+ P+LI+E G V PHSLTDRKLNA+I+FT+ SYNPNK+ASI MDSM+M + DMG +F +
Sbjct: 65  PKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFIT 124

Query: 126 DIPSFTQPPKNKTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRG 185
            IP+FTQPP N+T LN T++ NFIYPFG MK+L+  +G++P+L FSA VSYI+E+W S+ 
Sbjct: 125 TIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKWASKR 184

Query: 186 RLLEVYCDSLRLKFNDST 198
           R LE+YCD +RLK N ST
Sbjct: 185 RSLEIYCDRVRLKINGST 202

[Close]

BLAST of MELO3C035550.2 vs. NCBI nr
Match: XP_022970341.1 (uncharacterized protein At1g08160-like [Cucurbita maxima])

HSP 1 Score: 240.4 bits (612), Expect = 5.9e-60
Identity = 116/198 (58.59%), Postives = 152/198 (76.77%), Query Frame = 0


Query: 6   TQGEPSSSSAKEIS------YVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVF 65
           TQGE SSSS   I       Y ++HG AKRT+++RI GR+LL +M LV +A++ICWL+VF
Sbjct: 5   TQGEASSSSTSIIEAPKPSYYAQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVF 64

Query: 66  PRNPDLIVETGKVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWS 125
           P+ P+LI+E G V PHSLTDRKLNA+I+FT+ SYNPNK+ASI MDSM+M + DMG +F +
Sbjct: 65  PKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFIT 124

Query: 126 DIPSFTQPPKNKTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRG 185
            IP+FTQ P N+T L  T++ NFIYPFG MK+L+   G++P+L FSA VSYI+E+W S+ 
Sbjct: 125 TIPTFTQLPGNQTFLTPTVEVNFIYPFGQMKDLMLSNGLNPELHFSAHVSYIVEKWASKR 184

Query: 186 RLLEVYCDSLRLKFNDST 198
           R LE+YCD +RLK N ST
Sbjct: 185 RSLEIYCDRVRLKINGST 202

[Close]

BLAST of MELO3C035550.2 vs. TAIR10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 59.7 bits (143), Expect = 2.6e-09
Identity = 54/189 (28.57%), Postives = 86/189 (45.50%), Query Frame = 0


Query: 20  YVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDLIVETGKV--IPHSL 79
           Y   HG      +L +  + ++ L++++ +A +I WLIV PR     V    +    H+ 
Sbjct: 25  YRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTS 84

Query: 80  TDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWS-DIPSFTQPPKNKTVLNS 139
            D  L   +A TV   NPNK+  +  D +       G  F +  +  F Q  KN TVL  
Sbjct: 85  PDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTP 144

Query: 140 TIQGN--FIYPFGHMKEL--VKLEGI-SPDLRFSAKVSYIMERWTSRGRLLEVYCDSLRL 199
           T QG    I+  G  + L   ++ G+ + +++F  +V + +     R    +V CD LRL
Sbjct: 145 TFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRL 204

Query: 200 KFNDSTKNG 201
               ST NG
Sbjct: 205 PL--STSNG 211

[Close]

BLAST of MELO3C035550.2 vs. TAIR10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 54.7 bits (130), Expect = 8.4e-08
Identity = 45/167 (26.95%), Postives = 77/167 (46.11%), Query Frame = 0


Query: 40  LLGLMILVAIAMIICWLIVFPRNPDLIVETGKVIPHSLT-DRKLNATIAFTVTSYNPNKK 99
           +L L+ + A+  +I WL   P+     VE   V   +LT D  ++AT  FT+ S+NPN +
Sbjct: 33  ILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATFQFTIQSHNPNHR 92

Query: 100 ASIRMDSMRMIV--TDMGLSFWSDIPSFTQPPKN-KTVLNSTIQGNFIYPFGHMKEL--- 159
            S+   S+ + V   D  L+F   +  F QP  N K +  + I  N      + K+L   
Sbjct: 93  ISVYYSSVEIFVKFKDQTLAF-DTVEPFHQPRMNVKQIDETLIAENVAVSKSNGKDLRSQ 152

Query: 160 VKLEGISPDLRFSAKVSYIMERWTSRGRLLEVYCDSLRLKFNDSTKN 200
             L  I  ++   A+V + +  W S  R  ++ C  + +  +   K+
Sbjct: 153 NSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSLSQPNKS 198

[Close]

BLAST of MELO3C035550.2 vs. TAIR10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 53.1 bits (126), Expect = 2.4e-07
Identity = 43/158 (27.22%), Postives = 74/158 (46.84%), Query Frame = 0


Query: 52  IICWLIVFPRNPDLIVETGKVIPHSL--TDRKLNATIAFTVTSYNPNKKASIRMDSMRMI 111
           +I +L + P+     VE   V   ++   D  +NA  ++ + SYNP K  S+R  SMR+ 
Sbjct: 56  LITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYHSMRIS 115

Query: 112 VTDMGLSF-WSDIPSFTQPPKNKT-VLNSTIQGNFIYPFGHMKEL--VKLEG-ISPDLRF 171
                 S    +I  F Q PKN+T +    +  N      + ++L   K +G I  ++  
Sbjct: 116 TAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAEKSKGTIEMEVYI 175

Query: 172 SAKVSYIMERWTSRGRLLEVYCDSLRLKFNDSTKNGME 203
           +A+VSY    + SR R L+  C  + +    S+ +G +
Sbjct: 176 TARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQ 213

[Close]

BLAST of MELO3C035550.2 vs. TAIR10
Match: AT4G09590.1 (NDR1/HIN1-like 22)

HSP 1 Score: 42.7 bits (99), Expect = 3.3e-04
Identity = 26/105 (24.76%), Postives = 52/105 (49.52%), Query Frame = 0


Query: 40  LLGLMILVAIAMIICWLIVFPRNPDLIVETGKVIPHSLTD-RKLNATIAFTVTSYNPNKK 99
           ++G +I+V + + + W+I+ P+NP+ I++   V   +L+    L +    T+ S N N  
Sbjct: 26  IIGFIIIVLMTIFLVWIILQPKNPEFILQDTTVYAFNLSQPNLLTSKFQITIASRNRNSN 85

Query: 100 ASIRMDSMRMIVT--DMGLSFWSDIPSFTQPPKNKTVLNSTIQGN 142
             I  D +    +  +  ++  SD+P   Q  K  +V +  + GN
Sbjct: 86  IGIYYDHLHAYASYRNQQITLASDLPPTYQRHKEDSVWSPLLYGN 130

[Close]

BLAST of MELO3C035550.2 vs. TAIR10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 42.4 bits (98), Expect = 4.3e-04
Identity = 32/123 (26.02%), Postives = 50/123 (40.65%), Query Frame = 0


Query: 20  YVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDLIVETGKVIPHSLTD 79
           Y  +   +  TR+ +      L ++  V +   I WL + P  P   ++   V       
Sbjct: 30  YAHRVRESLSTRISKFICAMFLLVLFFVGVIAFILWLSLRPHRPRFHIQDFVVQGLDQPT 89

Query: 80  RKLNATIAFTVTSYNPNKKASIRMDSMR--MIVTDMGLSFWSDIPSFTQPPKNKTVLNST 139
              NA IAF VT  NPN+   +  DSM   +   D  +     +  F Q P N T++  T
Sbjct: 90  GVENARIAFNVTILNPNQHMGVYFDSMEGSIYYKDQRVGLIPLLNPFFQQPTNTTIVTGT 149

Query: 140 IQG 141
           + G
Sbjct: 150 LTG 152

[Close]

BLAST of MELO3C035550.2 vs. Swiss-Prot
Match: sp|Q9SJ52|NHL10_ARATH (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.7e-08
Identity = 54/189 (28.57%), Postives = 86/189 (45.50%), Query Frame = 0


Query: 20  YVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDLIVETGKV--IPHSL 79
           Y   HG      +L +  + ++ L++++ +A +I WLIV PR     V    +    H+ 
Sbjct: 25  YRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTS 84

Query: 80  TDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWS-DIPSFTQPPKNKTVLNS 139
            D  L   +A TV   NPNK+  +  D +       G  F +  +  F Q  KN TVL  
Sbjct: 85  PDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTP 144

Query: 140 TIQGN--FIYPFGHMKEL--VKLEGI-SPDLRFSAKVSYIMERWTSRGRLLEVYCDSLRL 199
           T QG    I+  G  + L   ++ G+ + +++F  +V + +     R    +V CD LRL
Sbjct: 145 TFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRL 204

Query: 200 KFNDSTKNG 201
               ST NG
Sbjct: 205 PL--STSNG 211

[Close]

BLAST of MELO3C035550.2 vs. Swiss-Prot
Match: sp|Q8VZ13|Y1816_ARATH (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.4e-06
Identity = 43/158 (27.22%), Postives = 74/158 (46.84%), Query Frame = 0


Query: 52  IICWLIVFPRNPDLIVETGKVIPHSL--TDRKLNATIAFTVTSYNPNKKASIRMDSMRMI 111
           +I +L + P+     VE   V   ++   D  +NA  ++ + SYNP K  S+R  SMR+ 
Sbjct: 56  LITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYHSMRIS 115

Query: 112 VTDMGLSF-WSDIPSFTQPPKNKT-VLNSTIQGNFIYPFGHMKEL--VKLEG-ISPDLRF 171
                 S    +I  F Q PKN+T +    +  N      + ++L   K +G I  ++  
Sbjct: 116 TAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAEKSKGTIEMEVYI 175

Query: 172 SAKVSYIMERWTSRGRLLEVYCDSLRLKFNDSTKNGME 203
           +A+VSY    + SR R L+  C  + +    S+ +G +
Sbjct: 176 TARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQ 213

[Close]

BLAST of MELO3C035550.2 vs. TrEMBL
Match: tr|A0A1S3CGQ5|A0A1S3CGQ5_CUCME (uncharacterized protein LOC103500702 OS=Cucumis melo OX=3656 GN=LOC103500702 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 5.2e-105
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MRSIATQGEPSSSSAKEISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFP 60
           MRSIATQGEPSSSSAKEISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFP
Sbjct: 1   MRSIATQGEPSSSSAKEISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFP 60

Query: 61  RNPDLIVETGKVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWSD 120
           RNPDLIVETGKVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWSD
Sbjct: 61  RNPDLIVETGKVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWSD 120

Query: 121 IPSFTQPPKNKTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRGR 180
           IPSFTQPPKNKTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRGR
Sbjct: 121 IPSFTQPPKNKTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRGR 180

Query: 181 LLEVYCDSLRLKFNDST 198
           LLEVYCDSLRLKFNDST
Sbjct: 181 LLEVYCDSLRLKFNDST 197

[Close]

BLAST of MELO3C035550.2 vs. TrEMBL
Match: tr|A0A0A0LSV0|A0A0A0LSV0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G134270 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 1.2e-90
Identity = 169/180 (93.89%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 18  ISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDLIVETGKVIPHSL 77
           +SYV KHG AKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPD+IVETG+VIPHSL
Sbjct: 22  MSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSL 81

Query: 78  TDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWSDIPSFTQPPKNKTVLNST 137
           TDRKLNATIAFTVTSYNPNKKASIRMDSMRMIV+DMGLSFWSDIPSFTQPPKNKTVL ST
Sbjct: 82  TDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKNKTVLTST 141

Query: 138 IQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRGRLLEVYCDSLRLKFNDST 197
           IQGNFIYPFGHMKEL+KLEGISP+LRFSAKVSYIMERWTSR RL+EVYCDSLRLKFNDST
Sbjct: 142 IQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFNDST 201

[Close]

BLAST of MELO3C035550.2 vs. TrEMBL
Match: tr|A0A0A0LY09|A0A0A0LY09_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132760 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.4e-52
Identity = 107/174 (61.49%), Postives = 137/174 (78.74%), Query Frame = 0


Query: 24  HGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDLIVETGKVIPHSLTDRKLN 83
           HG  KRTR++R+ GR+LLG++ LVA+ MIICWL+V P++P LIVETGKVI HS T   LN
Sbjct: 10  HGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIAHSSTISMLN 69

Query: 84  ATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWSDIPSFTQPPKNKTVLNSTIQGNFI 143
           ATIAFTV SYNPNK+ASI MD MRMIV +MG+ F S IPSFT  P+N+TVL+S +Q NF 
Sbjct: 70  ATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLSSAVQVNFE 129

Query: 144 YPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRGRLLEVYCDSLRLKFNDST 198
           YPFG+ +E      I+P+L+FSA+VSY +++W S+ RLLE+YC+ + LK NDST
Sbjct: 130 YPFGYTEE------INPELQFSAEVSYSIKKWMSKPRLLEIYCNHILLKINDST 177

[Close]

BLAST of MELO3C035550.2 vs. TrEMBL
Match: tr|A0A1S3CGS4|A0A1S3CGS4_CUCME (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103500718 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.3e-52
Identity = 108/174 (62.07%), Postives = 135/174 (77.59%), Query Frame = 0


Query: 24  HGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDLIVETGKVIPHSLTDRKLN 83
           HG  KRTR++R+ GR+LLG++ LVA+ MIICWL+V P+ P LIVETGKV+ HS T   LN
Sbjct: 10  HGITKRTRLIRLVGRSLLGVIFLVALGMIICWLVVIPKTPRLIVETGKVVVHSSTISMLN 69

Query: 84  ATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWSDIPSFTQPPKNKTVLNSTIQGNFI 143
           ATIAFTV SYNPNK+ASI MD MRMIV +MG+ F S IPSFT  P+N+TVL S +Q NF 
Sbjct: 70  ATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLWSAVQVNFE 129

Query: 144 YPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRGRLLEVYCDSLRLKFNDST 198
           YPFG+ +E      I+P+L+FSA+VSY +E+W S+ RLLE+YC+ L LK NDST
Sbjct: 130 YPFGYTEE------INPELQFSAEVSYSVEKWMSKPRLLEIYCNHLLLKINDST 177

[Close]

BLAST of MELO3C035550.2 vs. TrEMBL
Match: tr|A0A0A0LSU5|A0A0A0LSU5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132730 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 5.1e-52
Identity = 113/203 (55.67%), Postives = 147/203 (72.41%), Query Frame = 0


Query: 1   MRSIATQGEPSSSS---AKEISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLI 60
           MRS  TQGE +SSS   A + S+  +    KRTR++RI GR+LL ++I +++A+I CWL+
Sbjct: 1   MRSTTTQGEGASSSIIEAPKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLV 60

Query: 61  VFPRNPDLIVETGKVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTD-MGLS 120
           VFPR P L+VET KV  H  T+R LNATI F + SYNPNKKASI MDS++MIV+D MGL 
Sbjct: 61  VFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLP 120

Query: 121 FWSDIPSFTQPPKNKTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWT 180
           F S IP+FT  P+N+ V NST++ NF+YPFG     V  + +  +LRFSA+VSYI+ RW 
Sbjct: 121 FHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRP---VHSDWVHLELRFSAQVSYIVNRWR 180

Query: 181 SRGRLLEVYCDSLRLKFNDSTKN 200
           S+ RLLE+YCD L L+ NDST N
Sbjct: 181 SKPRLLEIYCDHLWLRINDSTPN 200

The following BLAST results are available for this feature:

BLAST of MELO3C035550.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462326.1	7.9e-105	100.00	PREDICTED: uncharacterized protein LOC103500702 [Cucumis melo]	[more]
XP_004139454.1	1.9e-90	93.89	PREDICTED: uncharacterized protein LOC101218532 [Cucumis sativus] >KGN64868.1 hy...	[more]
XP_023520091.1	8.3e-62	59.60	uncharacterized protein At1g08160-like [Cucurbita pepo subsp. pepo]	[more]
XP_022964992.1	5.4e-61	59.09	uncharacterized protein At1g08160-like [Cucurbita moschata]	[more]
XP_022970341.1	5.9e-60	58.59	uncharacterized protein At1g08160-like [Cucurbita maxima]	[more]

BLAST of MELO3C035550.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G35980.1	2.6e-09	28.57	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G22870.1	8.4e-08	26.95	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G08160.1	2.4e-07	27.22	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G09590.1	3.3e-04	24.76	NDR1/HIN1-like 22	[more]
AT4G05220.1	4.3e-04	26.02	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

BLAST of MELO3C035550.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SJ52\|NHL10_ARATH	4.7e-08	28.57	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
sp\|Q8VZ13\|Y1816_ARATH	4.4e-06	27.22	Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 P...	[more]

BLAST of MELO3C035550.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CGQ5\|A0A1S3CGQ5_CUCME	5.2e-105	100.00	uncharacterized protein LOC103500702 OS=Cucumis melo OX=3656 GN=LOC103500702 PE=...	[more]
tr\|A0A0A0LSV0\|A0A0A0LSV0_CUCSA	1.2e-90	93.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G134270 PE=4 SV=1	[more]
tr\|A0A0A0LY09\|A0A0A0LY09_CUCSA	1.4e-52	61.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132760 PE=4 SV=1	[more]
tr\|A0A1S3CGS4\|A0A1S3CGS4_CUCME	2.3e-52	62.07	protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103500718 PE=4 SV=1	[more]
tr\|A0A0A0LSU5\|A0A0A0LSU5_CUCSA	5.1e-52	55.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132730 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035550.2.1	MELO3C035550.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31852:SF5	GB\|AAF18257.1	coord: 29..198
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 29..198

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C035550.2	Cucumber (Chinese Long) v3	cucmedB009
MELO3C035550.2	Watermelon (97103) v2	medwmbB127
MELO3C035550.2	Wax gourd	medwgoB176
MELO3C035550.2	Cucumber (Gy14) v2	cgybmedB009
MELO3C035550.2	Cucumber (Gy14) v1	cgymedB361
MELO3C035550.2	Cucurbita maxima (Rimu)	cmamedB161
MELO3C035550.2	Cucurbita maxima (Rimu)	cmamedB215
MELO3C035550.2	Cucurbita moschata (Rifu)	cmomedB151
MELO3C035550.2	Cucurbita moschata (Rifu)	cmomedB203
MELO3C035550.2	Cucurbita pepo (Zucchini)	cpemedB563
MELO3C035550.2	Cucurbita pepo (Zucchini)	cpemedB880
MELO3C035550.2	Wild cucumber (PI 183967)	cpimedB011
MELO3C035550.2	Cucumber (Chinese Long) v2	cumedB010
MELO3C035550.2	Bottle gourd (USVL1VR-Ls)	lsimedB255
MELO3C035550.2	Watermelon (Charleston Gray)	medwcgB127
MELO3C035550.2	Watermelon (97103) v1	medwmB158
MELO3C035550.2	Watermelon (97103) v1	medwmB165
MELO3C035550.2	Silver-seed gourd	carmedB0174