MELO3C035534.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C035534.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionHeat shock 70 kDa protein
Locationchr12 : 8137239 .. 8140619 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAATTGTGTTATTGCTGTGTGGAGGCAACGCGGTATCGATATTCTTCTGAATGAGGAATCATAATGAGAAACCTCTGCAGTGATATGCTTTGGGCAAAAGCAGCGGTTTTTGGGTTCTACAGCTGCTGCTTCTGCAACACTGAACCCTAGATCCACAATATCTCAGGTAAAGATATTGATTGGACGTAACTTCAGTGAGCCAGGAATCGATCTCAAAATGTTTCCTTTCAAAACATCTGGAGCTCTTGATGGGAGCATTTTGGTTCATGTGAAATACTTGGGGGAGACTCATACATTTACTCCAGTTCAGATTATGGGAATGTTCCTTGCACATCTGAGGATGTAGCTGAGAAAAATTTGAGAGCACCATTTTCAGATTGTGTTATTGGTCTTCCATCGTATTTTACAGATTTGCAGAGACGATATTGGAATGCTGCTGCTATTGCTGGTTTAAGCCTTTGAGACTCATGCATGACTGTACTGCAACTGCACTTAGCTATGGAATTTATAAAACAGATTTCTCAAATACAGGTCCAATATCCGTTGCATTTGTTGATATTGGTCATTGTGATACCCAGGTTTCTATTGTATCATTTGATACCCAGATTTCTCAAATACACTTCCCTTGGATTTTTTAACTTGCATTAGCTGGCATTTAATGGGGAGTTGAGAAAAGATTATATTCCTAGCATGAACTTGAATCTTTAATGCCAATGACTGGATCTGGATAAAACACAAAACTCTCATGGTTCTGCTTTTTTTCCTTTTTTTCTTCTAGCTTCTTTTGGGTTCTTGGGTGTAATGTACTTGGACAAAGAAGGGTTCTTGAATCCTACTCCTTTTACCAACATTGACCTTAATAAATTTGTTGACCTGAAGAGAAACTGTTCTATTATTTTTCTTTACAAATGGGTGAAATGTGATATTTCATGTTCTTGTATAACATGATTTAGGCGATTTTGCAACTTGTAATTATGTGTTTTCTTCATCTACTTACTTGACATGTTCCTTCTTCTGGGCTTATTAGTTGCATGGATGCTAAATGGTATATGGTTGATGGAACACAGGTGCAAGATTCATTTCCATTCTCAATTGGCTTCTCATCAGATGCAGACCCAATTAGCTTAGGATTAAATAATGTACTATTTCCCAAAGGCCAGCACATTCCAAATACTAAAGTTCTATCATTCCTGCGCAATAGTTTATTCCACTTAGAAGCAGTCTATAGTAACCCGGATGAACTACCTCCTGGCATGTCTTCAAAAATTGATTGCTTTACAGTATGTTCACTTTTAATCTTTTTTATTTATTATTGTTATTAATGAAGTAGTTCTTGTCGAGCCGGAAGGCTTTTAAATTGCTGCAGTGTTCAGAAACTACTCTAGAGAGTGTGTTAACCTGTTTCTATTTCTTTTTTTTTTAATTTTTCTTATGTTGGATTGGAATTGATTGTTAAATGTTAAGTCATTTGAGATGTAGATTGGTCCTTTCCAAGGTTCAAACAACTCGAATTCAAGGGTTAAAGTCAGAGTTCGATTAAATATGAATGGCATCATTACTGTTGAATCAGCTACAGTAAGTAATATTTCTGTCAGATTTCCCACTGTTTACTAGAAATTTCTATGTATTTATATGAACTATGAATTTAGACCATAGAGGATACTATAGATCAACAAATTCCAAGGAGAGATGTTACTCACTCGAACATAGAGAAGATGGAGATCGATTTTGTTGATTCTTTCCATTCAGAGGTATTGAAGACATTCCTTTCGGTACTCAAAAAGCTTTATATGCATCAGAAATATGGATTCGCTTATTTGTGGAGAGGCGAGGCGCAGATGAAGAGGTGCGGCAGAGGCGCGCGCCTTCCTCCAGGCACAGTAGGCGCAAAAGCCCCAAAGGCGCGGGCTTTATTATTTGGGCTAGGCTATAATTAAAAAAAAAATATTATACCTATTAGGTGTTTTACATATGGCTATAAGTCCAACGAAGAAGATACCGATGACTATAAGTTCAATGAAGGAGTGAATGAAGATGAGAATCAATTTAGTGATGATGAGTTTGATCTTTAGGAATGAACTTTTATTTTGATTGTTGTTGAATTCTGACTAGTTTTCTATTGTGTTTTGTTTTTTGGGTAGAAAACTAATATTATAATATTTTATACATTAGAGTTAATTCTCATTTCCACATTGGTTATTTACTTATATTTTGTATATTGTTGTTCCTTTCAATTTTGTGGATATATATATTAATATATAGTGCGCCTCATGAAAAAAAGCCCGCCCCTTTTTGTGCGCCTTACGCCTAGGCTCCAGAGGACCATTGCGCCTTAGTGCGCCTTGAGCCTTTAAAAGCACTCGTTAATTCTGTAATATATACATCTTTCACTTTTGGAAATGCCTATACTCTCCCTCCCCCCTCCCTCCCTTCCTCTCTCTCGGGAGACATGCCAATACCATCTAAAAAAGCTCATATTATGTTTCTTATCTCCCAACGTTTTCTTTCCCTGGAAATTTGTCTCTCATCTCTTTCAGGGTACTTCACAAAAATTTTTGGTGTCTTTAAATAAATTGATTTATTGCATTTGTCCAGTTTAATGTTCCAAGAAAAGCTAGGGGCACAAGGTGGATTGACGTACCAGTTATATGATACAATGTTGTTATTTCAGTTGCTACCACACACCAACTTTTAGATCAAATGAGACAGAGAAGGTTATTTCTATTTTTGTTGTATGATACAATGTTGTATAACATTTTCTGAACCAGAAGTTTGCCATTTCAATTTCTCTTCTCTTTGCTTATTCTATTCTTCCACTTTTCTTAGTTGGTGGATCCTATAATTGACCGATACAAAGATGAAGAAGCTAGAGCACAAGCTAAAGCACATCTGTTAAAGTGTATTTTTGACTATAGAAACTCGTGGGGATTCACTTTCACCTCAAGTTCGAGCATTGGTAAATGACTCATGACCTCTCGTATTACATTCTTTGAAGATTTTCCGTGACGTTTTTGTTTTAACGTTTACTTTGATTCGATACTAAACTTGGAAATTAGTCTTCAATCAACTAATTAGTCCTTATTTCTGTATGTCACTACTTTAAGTAGATAACAGTTCGATATTCTTTTGTAGGTCGTTCAACATATCGAAGAAGAAAATACCAATTTGGAGGGTCATGAAGGTATGTGAATATCTTCGTTAGTATAGTTGTAAATTAATTAATATTTTTAAATGATTCTTTTTGGAAAGGATGGATATTGGTTGGGGGGGGGGGGGTTGAGGAGGATGTACCTCAAGTGCTACAGTATCGGAAGTCATCGAGTTACCAAATTTCTTGCTATCCTCACGGGATAACCTCATTGATTTACGAAAAGTAG

mRNA sequence

ATGAGAATTGTGTTATTGCTGTGTGGAGGCAACGCGCGGTTTTTGGGTTCTACAGCTGCTGCTTCTGCAACACTGAACCCTAGATCCACAATATCTCAGAGACGATATTGGAATGCTGCTGCTATTGCTGGTCCAATATCCGTTGCATTTGTTGATATTGGTCATTGTGATACCCAGATTGGTCCTTTCCAAGGTTCAAACAACTCGAATTCAAGGGTTAAAGTCAGAGTTCGATTAAATATGAATGGCATCATTACTGTTGAATCAGCTACAACCATAGAGGATACTATAGATCAACAAATTCCAAGGAGAGATGTTACTCACTCGAACATAGAGAAGATGGAGATCGATTTTGTTGATTCTTTCCATTCAGAGGTATTGAAGACATTCCTTTCGGTACTCAAAAAGCTTTATATGCATCAGAAATATGGATTCGCTTATTTGTGGAGAGGCGAGGCGCAGATGAAGAGGTGCGGCAGAGGCGCGCGCCTTCCTCCAGGCACATTTAATGTTCCAAGAAAAGCTAGGGGCACAAGTTGCTACCACACACCAACTTTTAGATCAAATGAGACAGAGAAGGTCGTTCAACATATCGAAGAAGAAAATACCAATTTGGAGGGTCATGAAGGATGGATATTGGTTGGGGGGGGGGGGGTTGAGGAGGATGTACCTCAAGTGCTACAGTATCGGAAGTCATCGAGTTACCAAATTTCTTGCTATCCTCACGGGATAACCTCATTGATTTACGAAAAGTAG

Coding sequence (CDS)

ATGAGAATTGTGTTATTGCTGTGTGGAGGCAACGCGCGGTTTTTGGGTTCTACAGCTGCTGCTTCTGCAACACTGAACCCTAGATCCACAATATCTCAGAGACGATATTGGAATGCTGCTGCTATTGCTGGTCCAATATCCGTTGCATTTGTTGATATTGGTCATTGTGATACCCAGATTGGTCCTTTCCAAGGTTCAAACAACTCGAATTCAAGGGTTAAAGTCAGAGTTCGATTAAATATGAATGGCATCATTACTGTTGAATCAGCTACAACCATAGAGGATACTATAGATCAACAAATTCCAAGGAGAGATGTTACTCACTCGAACATAGAGAAGATGGAGATCGATTTTGTTGATTCTTTCCATTCAGAGGTATTGAAGACATTCCTTTCGGTACTCAAAAAGCTTTATATGCATCAGAAATATGGATTCGCTTATTTGTGGAGAGGCGAGGCGCAGATGAAGAGGTGCGGCAGAGGCGCGCGCCTTCCTCCAGGCACATTTAATGTTCCAAGAAAAGCTAGGGGCACAAGTTGCTACCACACACCAACTTTTAGATCAAATGAGACAGAGAAGGTCGTTCAACATATCGAAGAAGAAAATACCAATTTGGAGGGTCATGAAGGATGGATATTGGTTGGGGGGGGGGGGGTTGAGGAGGATGTACCTCAAGTGCTACAGTATCGGAAGTCATCGAGTTACCAAATTTCTTGCTATCCTCACGGGATAACCTCATTGATTTACGAAAAGTAG

Protein sequence

MRIVLLLCGGNARFLGSTAAASATLNPRSTISQRRYWNAAAIAGPISVAFVDIGHCDTQIGPFQGSNNSNSRVKVRVRLNMNGIITVESATTIEDTIDQQIPRRDVTHSNIEKMEIDFVDSFHSEVLKTFLSVLKKLYMHQKYGFAYLWRGEAQMKRCGRGARLPPGTFNVPRKARGTSCYHTPTFRSNETEKVVQHIEEENTNLEGHEGWILVGGGGVEEDVPQVLQYRKSSSYQISCYPHGITSLIYEK
Homology
[Close]
BLAST of MELO3C035534.2 vs. NCBI nr
Match: XP_008462547.1 (PREDICTED: heat shock 70 kDa protein 16-like [Cucumis melo])

HSP 1 Score: 189.5 bits (480), Expect = 1.4e-44
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 

Query: 60  IGPFQGSNNXXXXXXXXXXXXXXGIITVESATTIEDTIDQQIPRRDVTHSNIEKMEIDFV 119
           IGPFQGSNNXXXXXXXXXXXXXXGIITVESATTIEDTIDQQIPRRDVTHSNIEKMEIDFV
Sbjct: 92  IGPFQGSNNXXXXXXXXXXXXXXGIITVESATTIEDTIDQQIPRRDVTHSNIEKMEIDFV 151

Query: 120 DSFHSEVLKTFLSVLKKLYMHQKYGFAYLWRGEAQMKRCGRGARLPPGT 169
           DSFHSEVLKTFLSVLKKLYMHQKYGFAYLWRGEAQMKRCGRGARLPPGT
Sbjct: 152 DSFHSEVLKTFLSVLKKLYMHQKYGFAYLWRGEAQMKRCGRGARLPPGT 200

[Close]
BLAST of MELO3C035534.2 vs. NCBI nr
Match: XP_008465078.1 (PREDICTED: heat shock 70 kDa protein 16 [Cucumis melo] >XP_008465079.1 PREDICTED: heat shock 70 kDa protein 16 [Cucumis melo])

HSP 1 Score: 88.2 bits (217), Expect = 4.3e-14
Identity = 45/66 (68.18%), Postives = 47/66 (71.21%), Query Frame = 0 

Query: 60  IGPFQGSNNXXXXXXXXXXXXXXGIITVESATTIEDTIDQQIPRRDVTHSNIEKMEIDFV 119
           IGPFQGSNN              GIITVESAT +EDTIDQQI RRD THSN EKME +FV
Sbjct: 462 IGPFQGSNNSNSRVKVRVQLNMNGIITVESATIVEDTIDQQISRRDATHSNTEKMETEFV 521

Query: 120 DSFHSE 126
           DSFHSE
Sbjct: 522 DSFHSE 527

[Close]
BLAST of MELO3C035534.2 vs. NCBI nr
Match: XP_004151979.1 (PREDICTED: heat shock 70 kDa protein 16 [Cucumis sativus] >KGN57923.1 hypothetical protein Csa_3G391900 [Cucumis sativus])

HSP 1 Score: 84.7 bits (208), Expect = 4.8e-13
Identity = 43/66 (65.15%), Postives = 47/66 (71.21%), Query Frame = 0 

Query: 60  IGPFQGSNNXXXXXXXXXXXXXXGIITVESATTIEDTIDQQIPRRDVTHSNIEKMEIDFV 119
           IGPFQGSNN              GIITVESAT +EDTIDQQ+PRRD T+SN EKME +FV
Sbjct: 462 IGPFQGSNNSNSRVKVRVQLNMNGIITVESATLVEDTIDQQMPRRDATYSNTEKMETEFV 521

Query: 120 DSFHSE 126
           DS HSE
Sbjct: 522 DSSHSE 527

[Close]
BLAST of MELO3C035534.2 vs. NCBI nr
Match: XP_022976427.1 (heat shock 70 kDa protein 16-like [Cucurbita maxima] >XP_022976428.1 heat shock 70 kDa protein 16-like [Cucurbita maxima] >XP_022976429.1 heat shock 70 kDa protein 16-like [Cucurbita maxima])

HSP 1 Score: 79.3 bits (194), Expect = 2.0e-11
Identity = 40/66 (60.61%), Postives = 44/66 (66.67%), Query Frame = 0 

Query: 60  IGPFQGSNNXXXXXXXXXXXXXXGIITVESATTIEDTIDQQIPRRDVTHSNIEKMEIDFV 119
           IGP QGSNN              GI+TVESAT +ED ID+QIPRRDVTHSN E ME +FV
Sbjct: 462 IGPVQGSNNSNARIKVRVQLNFNGIVTVESATLVEDNIDEQIPRRDVTHSNTENMETEFV 521

Query: 120 DSFHSE 126
           DS H E
Sbjct: 522 DSSHFE 527

[Close]
BLAST of MELO3C035534.2 vs. NCBI nr
Match: XP_022139586.1 (heat shock 70 kDa protein 16 isoform X1 [Momordica charantia] >XP_022139587.1 heat shock 70 kDa protein 16 isoform X1 [Momordica charantia])

HSP 1 Score: 70.1 bits (170), Expect = 1.2e-08
Identity = 50/73 (68.49%), Postives = 55/73 (75.34%), Query Frame = 0 

Query: 53  IGHCDTQIGPFQGSNNXXXXXXXXXXXXXXGIITVESATTIEDTIDQQIPRRDVTHSNIE 112
           IG    QIGP QGSNN XXXXXXXXXXXX GIITVESA  +ED +D+QIP+RD  HSN E
Sbjct: 457 IGCFTMQIGPVQGSNNSXXXXXXXXXXXXNGIITVESAIFVEDNVDEQIPKRDAAHSNTE 516

Query: 113 KMEIDFVDSFHSE 126
           KME +F  S  SE
Sbjct: 517 KMETEFEASSCSE 529

[Close]
BLAST of MELO3C035534.2 vs. TrEMBL
Match: tr|A0A1S3CH62|A0A1S3CH62_CUCME (heat shock 70 kDa protein 16-like OS=Cucumis melo OX=3656 GN=LOC103500876 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 9.1e-45
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 

Query: 60  IGPFQGSNNXXXXXXXXXXXXXXGIITVESATTIEDTIDQQIPRRDVTHSNIEKMEIDFV 119
           IGPFQGSNNXXXXXXXXXXXXXXGIITVESATTIEDTIDQQIPRRDVTHSNIEKMEIDFV
Sbjct: 92  IGPFQGSNNXXXXXXXXXXXXXXGIITVESATTIEDTIDQQIPRRDVTHSNIEKMEIDFV 151

Query: 120 DSFHSEVLKTFLSVLKKLYMHQKYGFAYLWRGEAQMKRCGRGARLPPGT 169
           DSFHSEVLKTFLSVLKKLYMHQKYGFAYLWRGEAQMKRCGRGARLPPGT
Sbjct: 152 DSFHSEVLKTFLSVLKKLYMHQKYGFAYLWRGEAQMKRCGRGARLPPGT 200

[Close]
BLAST of MELO3C035534.2 vs. TrEMBL
Match: tr|A0A1S3CNF5|A0A1S3CNF5_CUCME (heat shock 70 kDa protein 16 OS=Cucumis melo OX=3656 GN=LOC103502780 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.9e-14
Identity = 45/66 (68.18%), Postives = 47/66 (71.21%), Query Frame = 0 

Query: 60  IGPFQGSNNXXXXXXXXXXXXXXGIITVESATTIEDTIDQQIPRRDVTHSNIEKMEIDFV 119
           IGPFQGSNN              GIITVESAT +EDTIDQQI RRD THSN EKME +FV
Sbjct: 462 IGPFQGSNNSNSRVKVRVQLNMNGIITVESATIVEDTIDQQISRRDATHSNTEKMETEFV 521

Query: 120 DSFHSE 126
           DSFHSE
Sbjct: 522 DSFHSE 527

[Close]
BLAST of MELO3C035534.2 vs. TrEMBL
Match: tr|A0A0A0L803|A0A0A0L803_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G391900 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 3.2e-13
Identity = 43/66 (65.15%), Postives = 47/66 (71.21%), Query Frame = 0 

Query: 60  IGPFQGSNNXXXXXXXXXXXXXXGIITVESATTIEDTIDQQIPRRDVTHSNIEKMEIDFV 119
           IGPFQGSNN              GIITVESAT +EDTIDQQ+PRRD T+SN EKME +FV
Sbjct: 462 IGPFQGSNNSNSRVKVRVQLNMNGIITVESATLVEDTIDQQMPRRDATYSNTEKMETEFV 521

Query: 120 DSFHSE 126
           DS HSE
Sbjct: 522 DSSHSE 527

The following BLAST results are available for this feature:
BLAST of MELO3C035534.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008462547.11.4e-44100.00PREDICTED: heat shock 70 kDa protein 16-like [Cucumis melo][more]
XP_008465078.14.3e-1468.18PREDICTED: heat shock 70 kDa protein 16 [Cucumis melo] >XP_008465079.1 PREDICTED... [more]
XP_004151979.14.8e-1365.15PREDICTED: heat shock 70 kDa protein 16 [Cucumis sativus] >KGN57923.1 hypothetic... [more]
XP_022976427.12.0e-1160.61heat shock 70 kDa protein 16-like [Cucurbita maxima] >XP_022976428.1 heat shock ... [more]
XP_022139586.11.2e-0868.49heat shock 70 kDa protein 16 isoform X1 [Momordica charantia] >XP_022139587.1 he... [more]
BLAST of MELO3C035534.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C035534.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C035534.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CH62|A0A1S3CH62_CUCME9.1e-45100.00heat shock 70 kDa protein 16-like OS=Cucumis melo OX=3656 GN=LOC103500876 PE=4 S... [more]
tr|A0A1S3CNF5|A0A1S3CNF5_CUCME2.9e-1468.18heat shock 70 kDa protein 16 OS=Cucumis melo OX=3656 GN=LOC103502780 PE=3 SV=1[more]
tr|A0A0A0L803|A0A0A0L803_CUCSA3.2e-1365.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G391900 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013126Hsp_70_fam
IPR029047HSP70_peptide-bd_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0000166 nucleotide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035534.2.1MELO3C035534.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029047Heat shock protein 70kD, peptide-binding domain superfamilyGENE3DG3DSA:2.60.34.10coord: 47..119
e-value: 3.0E-6
score: 29.2
NoneNo IPR availablePANTHERPTHR19375:SF230SUBFAMILY NOT NAMEDcoord: 59..109
IPR013126Heat shock protein 70 familyPANTHERPTHR19375HEAT SHOCK PROTEIN 70KDAcoord: 59..109

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C035534.2Cucumber (Gy14) v2cgybmedB009
MELO3C035534.2Cucumber (Gy14) v1cgymedB361
MELO3C035534.2Cucurbita maxima (Rimu)cmamedB161
MELO3C035534.2Cucurbita maxima (Rimu)cmamedB215
MELO3C035534.2Cucurbita moschata (Rifu)cmomedB203
MELO3C035534.2Cucurbita pepo (Zucchini)cpemedB563
MELO3C035534.2Cucurbita pepo (Zucchini)cpemedB880
MELO3C035534.2Wild cucumber (PI 183967)cpimedB011
MELO3C035534.2Cucumber (Chinese Long) v2cumedB010
MELO3C035534.2Bottle gourd (USVL1VR-Ls)lsimedB255
MELO3C035534.2Watermelon (Charleston Gray)medwcgB127
MELO3C035534.2Watermelon (97103) v1medwmB165
MELO3C035534.2Silver-seed gourdcarmedB0174
MELO3C035534.2Cucumber (Chinese Long) v3cucmedB009
MELO3C035534.2Watermelon (97103) v2medwmbB127
MELO3C035534.2Wax gourdmedwgoB176