MELO3C035493.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C035493.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionLOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like
Locationchr12 : 6654484 .. 6659718 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGTCAACAACGCGTCGGGAAAACAATCTTTTCCGACGCACCACGAAGGCGTCGGCAAGAATACGTCGGGAAAAGGGTAAATTAATTTTAAAAAACGAACTATTCCTGACGCCGTGAACAGTTCGTCGGGAGAGGCGTCGGGAATATGGGTTTTTCCCGACACCGCGTGAAACGTCGGGAAAAGGGTTTAATGAGCGTCGAGAATTCCCATTTTCCTAACGCGTTTTGAGGGATTTCCTGACGCCACGTCACTGTGTCGGGATATCCCCTTTAAATTTGTTTCAGTTCTGTAAATTACAGAACCGAAACCGAGAGGAGAGAAAGAAAGGAGAAGTAGAAGTCGTCGCGCGATTGTTGCCGTTGTTCCGCCGTCGTCCGTCGCCGCCCTCCCTCGCCGTTGTCCCTCGCCACCGTCTGCCACTTTAGGTAAGTGAAATATGAAAATTTATTTAGTTTAAGTTTATGTTTTAGGGTTTTTTTGATGAAAATTAGTTTAGGGTTTTTTTTATGAAAATTAGTTTAGGATTTTCTTTTGGAATAGATTTTTGTTGGTTAAATGTATTTTTGTATAGAGTGTGTGTAATTTGTGGTTGAATTGAAATTGAAATTTGAAATTTGAATGGTTTAGGATTTTTGTTTTAGAAAAATGAATTGAGGGGAGATTTTATAGTTAAATGAAAATTGAATGGGGGGTTGAAGTTGGGGGGAGGGGGGTTTTATTGTTTAAATTGAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATGTGTGTTAAGATTTGTTTTGGCTATCCTCAGTTATGGTAGCCTGTTTGTGTTGAATATTTTTATTATTAATTTGAGATGGCTATCCTGCAGTTATGGTAGCTTTTTTGTTTTGAATTTGTTTATGTTTGGGATGACTATCCTGTAGTTATGGTAGTCTTTTTTGTTTTGAATTTGCTGGTTTGAAGGGGTGGTAGTAGGATAGCTTGAAGTATTTTGTTGTattattaatccaacgcaaccgataggacgtcaatacgatcggagacatcaaacctccttaaacatcctacCGAAGATATTTTGAAGTATTTCGTTGTTAATAATTAGGTTGTGTTGGCTATCCTGCAGTTATGGTAGCATCTATAGTTTGAACTTAGTTATTGAAAAATAGTGAAAATTCAGGGGAGTAAGTTATGGATGTGAGAGAATGAGAGATATATGTTTCTAATCAAACCTATTTATGTTTTAGGGACTTAAACGATCGATAAGAGTTGGATGAAACTTAGAAATAAGTTATCCCGTGAGTATAGACATGGAGTGACCCAATTTTTAGAATTTGCCAAATTTCACGTTGATGCTTACGGACGATTGAGGTGTCCATGCAAGAGATGTTTGAATTTAATTGGAGCTCATTAGAGGGTGTGGAACAACATCTGCTGACTATTGGAATATCCCCCTACTACACAGAATGGGTGTATCATGGAGAGTCATTAAGCTATAGAGGTACAAAAAACTTTGAGGAAGGAACTAGTAGTAATCCTTTTAATGAAGGAACTAGTAGTACACAATTTAATGAAGAAGGTGATATCTTTGGTATGCTAAATGATTTACAAGCCCTTATTGAACATGAAGAGGAAATAGAGGAATTTCGTTTGGAAGATGAAATGGCGATGAATGTTCGGGTAAATATAGATGAAGATACAACAAAAAATATATTTCAGAACTTATTGAATCAAGCACGTAATGAGTTGTACCCCGGTTGTTCTGAATTTTCGTCGTTGAATTTTTTGGTTAAGTTGATGCATGTGAAAGTTCTAAATGGTTGGAGTAACAAGTCATTCGACATGTTGTTAGAACTTTTAAGAGCAGCGTTTCCAATGTGTAATAGTACTATTCCTAGTTCATTTTATGAAGCAAAACGAAAATTTTGTGACTTGGGCTTGGGATACGAGACTATTCACGCGTGCAAGTATGACTGTATATTGTATTGGAAAGAGTTTGCTGATTTGCAACATTGTCCTACATGTGGCGAGGCTAGGTACAAGGTTAATCATAATAGAGGGAAAAAACTTCCGCATAAGGTATTGCGCCATTTTCCTTTGGTACCTAGATTACAGCGCTTGTTTGTATCGCAGGAAGGGTCTGCTGACATGAGATGGCATAGGGACAAACGTGTTGAACTTGATTCTCGACGTACTACTCAAAATAGTGGAATAATGATCATTGGTGAATGTGATGCAAGTGGAACTGGAGACAATAATTTCTACGGTGTTCTGGACGAAGTGTTACACGTACAATATCCGTTGGAAAGAAATGTATGGCTATTTAAGTGTCAGTGGTATGTCACGGACGTAAACAAAAGTCAAAGAACGACACACATTGAAGTACGGTACAAATCTCTCAACACATCCCGTTTTTGGTACGCGGAGGAACCTGTAATTCTTGCAACTCAAGCACATCAAGTTTTTTATGTAGATGATCCAAAAAATGGTACCAATTGGAAAGTTGTGCAACTCATCCAAAATAAGCGTATTTGGGACGTGCCAGAAGTGGAGGATGTTCAAAATGACCATATTAATATACTAGAAGTTGTTGTAAGCCACCAAGTGGATGACCACATCGAGGATGACACTCTATGCAGAAATGACGTTGATCCCACAATCATTGAAAGACCGGTTGTGCGTCATGTCACTGACGACTTCATCGACGATGTGGATGAACACTTGTCACATGCAAGCAATGAGGAATTATAGTGACAAATTAAACCACGTATGCACATATTTATATATAATTTATATATTTTGATTCTAGCTATGTGTTCGTATTTGGTTATTGAATGTTTGTTTTCTATATGTTCATAGTCATTATGTCATATCGACGATCAAATTTTATGGAGACGGACGATATGTTCCTCCAGTTTGAGGAGGATTTAGATAACATTGCGGGAGGGTCGTCATCACTGGGCGACAATACGGGTGAGTCTAAGAATTTTCTTCATTTTTAACTTACAAATATTTCATGTAGGGGTTTCTAACTTTATATGTTATTGTCTATTTATTGAGCAGGATCTTCTTCTCAACAAACGACTCCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTAGAGTTAGAGCGCCACGTTGCAATAAATGGGCGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAGCCTATTTCTCCACACGCCGTTCGCTTCAGCCAGGCGATAGGCATGTGCGTGCGAAAGACATTTCCCGTCCGCTGTCTTAAGTGGGCGGACGTTGGGAGAGAATACATTGAGGTCGTCAAGGGCGACCTCCAGGTAATTAAATTCACTACACATTTATATATGATTTCATTTGAAACATATCTAATTTTAACCAATTTAATGTGTTATGTTTGTAATGTGTAGCGATTGTTTGTGCTTGATTTCAATGATCAAGCAATGAACAGGTTTGTTGAGCATCAGATGCTCACGACCTTTAAAGAGTTCCGGGCCGACTGTCATAGATATTTCAAAAAGTACAGCGACCCGGAGGAGGCTCGTGCCAACCCACCAAACGCATTGGTTGGACGTGATGAGGATTGACACTTCCTCTGCGACCATTATATCAGCCGTGCATTCCAGGTATTTGTCATGATTAATTATGATAACAAGTTTTAATATGTATAAGAAATAAACAATATAATTGTTTTAATTGAGGAGCAATCACGGACAAACAAGGCTGCTAGACAGAAGCAGCCTTACAATTATAGTAGTGGGTCCAAGTCGTTTCTACAACGACAGTATGAGCTCACTGAAAGAAGAGGGCAGCCGGTTGATCGTGTGGCATTGTTTCGGGAAACACACGTTCGAGGTGGGACATTCGTGTCGCAGGCCGCCGAGGATGCGCATGTAAGTTATACCCTTATTAATTATCCACTTTTATTATATATTTTTGCGCGGTACCTAACATAATTTTTAAATTTGTTGCAGAATCAAATGCTGGAACTCAAATCCCAGCCTATCCCAAAGGGTAGTCAGCCACTCTTTGAGGATGAGATATGCGATCAGGTGTTGGGTAGACGACCAGGCTACTCAAAAGGCCTTGGTTGCGGACCCAAGCCGAAGGCCCGCAGAACGTCAAGTGCAAACAGTTCGTCGACATCTTCTTCGCAGTCCAACCAAAAAGAAATTGAATTACAAGCTAAACTTCATGAAGCTTTGGAACGGATTGAAGTACAAGATAGAAATCACCAAGCATTAGCTTCACAAGTGGAAGCTATAAAAAGATGATTGGAGACCTAACTTGTGCACAACAGGGACCACCACATGATCCCTAGCTCTACGGTACATCGTATATGTCCCTATTATTCTTAAGTTTTTGCAATATATGATTATATATTAAACATAGTTATTTTTATACCATTTTTACGACCGAAGGTGTAGAATGAC

mRNA sequence

ATGCCGTCAACAACGCGTCGGGAAAACAATCTTTTCCGACGCACCACGAAGGCGTCGGCAAGAATACGTCGGGAAAAGGAACCGAAACCGAGAGGAGAGAAAGAAAGGAGAAGTAGAAGTCGTCGCGCGATTGTTGCCGTTGTTCCGCCGTCGTCCGTCGCCGCCCTCCCTCGCCGTTGTCCCTCGCCACCGTCTGCCACTTTAGTCATTATGTCATATCGACGATCAAATTTTATGGAGACGGACGATATGTTCCTCCAGTTTGAGGAGGATTTAGATAACATTGCGGGAGGGTCGTCATCACTGGGCGACAATACGGGATCTTCTTCTCAACAAACGACTCCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTAGAGTTAGAGCGCCACGTTGCAATAAATGGGCGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAGCCTATTTCTCCACACGCCGTTCGCTTCAGCCAGGCGATAGGCATGTGCGTGCGAAAGACATTTCCCGTCCGCTGTCTTAAGTGGGCGGACGTTGGGAGAGAATACATTGAGGTCGTCAAGGGCGACCTCCAGCGATTGTTTGTGCTTGATTTCAATGATCAAGCAATGAACAGGTTTGTTGAGCATCAGATGCTCACGACCTTTAAAGAGTTCCGGGCCGACTGTCATAGATATTTCAAAAAGTACAGCGACCCGGAGGAGGCTCGTGCCAACCCACCAAACGCATTGGAGCAATCACGGACAAACAAGGCTGCTAGACAGAAGCAGCCTTACAATTATAGTAGTGGGTCCAAGTCGTTTCTACAACGACAGTATGAGCTCACTGAAAGAAGAGGGCAGCCGGTTGATCGTGTGGCATTGTTTCGGGAAACACACGTTCGAGGTGGGACATTCGTGTCGCAGGCCGCCGAGGATGCGCATAATCAAATGCTGGAACTCAAATCCCAGCCTATCCCAAAGGGTAGTCAGCCACTCTTTGAGGATGAGATATGCGATCAGGTGTTGGGTAGACGACCAGGCTACTCAAAAGGCCTTGGTTGCGGACCCAAGCCGAAGGCCCGCAGAACGTCAAGTGCAAACAGTTCGTCGACATCTTCTTCGCAGTCCAACCAAAAAGAAATTGAATTACAAGCTAAACTTCATGAAGCTTTGGAACGGATTGAAGTACAAGATAGAAATCACCAAGCATTAGCTTCACAAGTGGAAGCTATAAAAAGATGATTGGAGACCTAACTTGTGCACAACAGGGACCACCACATGATCCCTAGCTCTACGGTACATCGTATATGTCCCTATTATTCTTAAGTTTTTGCAATATATGATTATATATTAAACATAGTTATTTTTATACCATTTTTACGACCGAAGGTGTAGAATGAC

Coding sequence (CDS)

ATGCCGTCAACAACGCGTCGGGAAAACAATCTTTTCCGACGCACCACGAAGGCGTCGGCAAGAATACGTCGGGAAAAGGAACCGAAACCGAGAGGAGAGAAAGAAAGGAGAAGTAGAAGTCGTCGCGCGATTGTTGCCGTTGTTCCGCCGTCGTCCGTCGCCGCCCTCCCTCGCCGTTGTCCCTCGCCACCGTCTGCCACTTTAGTCATTATGTCATATCGACGATCAAATTTTATGGAGACGGACGATATGTTCCTCCAGTTTGAGGAGGATTTAGATAACATTGCGGGAGGGTCGTCATCACTGGGCGACAATACGGGATCTTCTTCTCAACAAACGACTCCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTAGAGTTAGAGCGCCACGTTGCAATAAATGGGCGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAGCCTATTTCTCCACACGCCGTTCGCTTCAGCCAGGCGATAGGCATGTGCGTGCGAAAGACATTTCCCGTCCGCTGTCTTAAGTGGGCGGACGTTGGGAGAGAATACATTGAGGTCGTCAAGGGCGACCTCCAGCGATTGTTTGTGCTTGATTTCAATGATCAAGCAATGAACAGGTTTGTTGAGCATCAGATGCTCACGACCTTTAAAGAGTTCCGGGCCGACTGTCATAGATATTTCAAAAAGTACAGCGACCCGGAGGAGGCTCGTGCCAACCCACCAAACGCATTGGAGCAATCACGGACAAACAAGGCTGCTAGACAGAAGCAGCCTTACAATTATAGTAGTGGGTCCAAGTCGTTTCTACAACGACAGTATGAGCTCACTGAAAGAAGAGGGCAGCCGGTTGATCGTGTGGCATTGTTTCGGGAAACACACGTTCGAGGTGGGACATTCGTGTCGCAGGCCGCCGAGGATGCGCATAATCAAATGCTGGAACTCAAATCCCAGCCTATCCCAAAGGGTAGTCAGCCACTCTTTGAGGATGAGATATGCGATCAGGTGTTGGGTAGACGACCAGGCTACTCAAAAGGCCTTGGTTGCGGACCCAAGCCGAAGGCCCGCAGAACGTCAAGTGCAAACAGTTCGTCGACATCTTCTTCGCAGTCCAACCAAAAAGAAATTGAATTACAAGCTAAACTTCATGAAGCTTTGGAACGGATTGAAGTACAAGATAGAAATCACCAAGCATTAGCTTCACAAGTGGAAGCTATAAAAAGATGA

Protein sequence

MPSTTRRENNLFRRTTKASARIRREKEPKPRGEKERRSRSRRAIVAVVPPSSVAALPRRCPSPPSATLVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSLGDNTGSSSQQTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGMCVRKTFPVRCLKWADVGREYIEVVKGDLQRLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRYFKKYSDPEEARANPPNALEQSRTNKAARQKQPYNYSSGSKSFLQRQYELTERRGQPVDRVALFRETHVRGGTFVSQAAEDAHNQMLELKSQPIPKGSQPLFEDEICDQVLGRRPGYSKGLGCGPKPKARRTSSANSSSTSSSQSNQKEIELQAKLHEALERIEVQDRNHQALASQVEAIKR
Homology
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BLAST of MELO3C035493.2 vs. NCBI nr
Match: ADN34071.1 (CACTA en-spm transposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 443.7 bits (1140), Expect = 6.6e-121
Identity = 227/275 (82.55%), Postives = 240/275 (87.27%), Query Frame = 0 

Query: 79  METDDMFLQFEEDLDNIAGGSSSLGDNTGSSSQQTTPTPRRRAQSRLLELERHVAINGRI 138
           METDDMFLQFE+DLDNIAGGSSS+GDNT SSSQQ TPTPRRRAQSRLLELERHVAING I
Sbjct: 1   METDDMFLQFEDDLDNIAGGSSSVGDNTESSSQQATPTPRRRAQSRLLELERHVAINGCI 60

Query: 139 PMTIAPGAEKPISPHAVRFSQAIGMCVRKTFPVRCLKWADVGREYIEVVKGDLQRLFVLD 198
           PMTIAPGAEKPISP+AV FSQAIG+CVRKTFPVRCLKW DVGREYIEVVKGDLQR FVLD
Sbjct: 61  PMTIAPGAEKPISPYAVHFSQAIGVCVRKTFPVRCLKWVDVGREYIEVVKGDLQRFFVLD 120

Query: 199 FNDQAMNRFVEHQMLTTFKEFRADCHRYFKKYSDPEEARANPPNAL-------------- 258
           FNDQAMNRFVEHQM+TTFKEF+ DCHR+FKKYSDPEEARANPPNAL              
Sbjct: 121 FNDQAMNRFVEHQMVTTFKEFQVDCHRHFKKYSDPEEARANPPNALVGRDEDWHFLYDHY 180

Query: 259 ------EQSRTNKAARQKQPYNYSSGSKSFLQRQYELTERRGQPVDRVALFRETHVRGGT 318
                 EQS TNKAARQKQPYN+SSGSKSFLQRQYEL ER+G+PVD V LFRETHVR GT
Sbjct: 181 IRRAFQEQSWTNKAARQKQPYNHSSGSKSFLQRQYELAERKGEPVDCVELFRETHVRAGT 240

Query: 319 FVSQAAEDAHNQMLELKSQPIPKGSQPLFEDEICD 334
           F+SQAAEDAHNQMLEL+SQP  +GSQPL EDEICD
Sbjct: 241 FMSQAAEDAHNQMLELQSQPTLEGSQPLSEDEICD 275

[Close]
BLAST of MELO3C035493.2 vs. NCBI nr
Match: XP_016901035.1 (PREDICTED: uncharacterized protein LOC107991153 [Cucumis melo] >XP_016901036.1 PREDICTED: uncharacterized protein LOC107991153 [Cucumis melo])

HSP 1 Score: 252.7 bits (644), Expect = 2.2e-63
Identity = 130/175 (74.29%), Postives = 145/175 (82.86%), Query Frame = 0 

Query: 71  MSYRRSNFMETDDMFLQFEEDLDNIAGGSSSLGDNTGSSSQ-QTTPTPRRRAQSRLLELE 130
           M Y R+NF+ETD MFL+FE+DLDN+AGGSSS+GDN GSSSQ   T TPRRR QSRLLELE
Sbjct: 1   MPYARNNFLETDVMFLEFEDDLDNLAGGSSSVGDNAGSSSQPPATQTPRRRVQSRLLELE 60

Query: 131 RHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGMCVRKTFPVRCLKWADVGREYIEVVKG 190
            HV + G IPM IAPGAE PI P+A+RFSQAIG+CV+KTF V  LKWAD+ REYIEVVKG
Sbjct: 61  CHVVVYGCIPMMIAPGAEMPIFPYAIRFSQAIGVCVQKTFFVCYLKWADIDREYIEVVKG 120

Query: 191 DLQRLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRYFKKYSDPEEARANPPNAL 245
           +LQR FVLDFNDQA+NRFVEHQMLTTFKEF  DCHR+FK      EARANPPN L
Sbjct: 121 NLQRFFVLDFNDQAINRFVEHQMLTTFKEFWGDCHRHFK------EARANPPNVL 169

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BLAST of MELO3C035493.2 vs. NCBI nr
Match: XP_016901155.1 (PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like [Cucumis melo])

HSP 1 Score: 148.3 bits (373), Expect = 5.7e-32
Identity = 92/181 (50.83%), Postives = 105/181 (58.01%), Query Frame = 0 

Query: 65  SATLVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSLGDNTGSSSQ-QTTPTPRRRAQS 124
           S    I S+ R+NF+ETD MFL+F  DLDN+AGGSSS+ +N+ SSSQ   T TP+R  QS
Sbjct: 46  SVISTISSFPRNNFLETDVMFLKFAGDLDNLAGGSSSMDENSESSSQPSATLTPKRHTQS 105

Query: 125 RLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGMCVRKTFPVRCLKWADVGREY 184
           RLLELE +V                                               GREY
Sbjct: 106 RLLELECYV----------------------------------------------TGREY 165

Query: 185 IEVVKGDLQRLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRYFKKYSDPEEARANPPNA 244
           IEVVK DLQ  FVLDF+DQAMN  VE+QM  TFKEF  DCH+ FKKYSDPEEARANPPN 
Sbjct: 166 IEVVKADLQ-FFVLDFSDQAMNTSVEYQMSNTFKEFWGDCHKQFKKYSDPEEARANPPNL 179

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BLAST of MELO3C035493.2 vs. NCBI nr
Match: XP_019078959.1 (PREDICTED: uncharacterized protein LOC104881002 [Vitis vinifera])

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-24
Identity = 70/229 (30.57%), Postives = 118/229 (51.53%), Query Frame = 0 

Query: 138 IPMTIAPGAEKPISPHAVRFSQAIGMCVRKTFPVRCLKWADVGREYIEVVKGDLQRLFVL 197
           +P+TI P   K    +  + S  IG+ VR+   VR  KW  + R  I  +   ++  F L
Sbjct: 43  LPITIKPSNGKQTGKYCEKLSNEIGLIVRQHALVRVEKWKQMPRAEINTMLDRIKEKFAL 102

Query: 198 DFNDQAMNRFVEHQMLTTFKEFRADCHRYFKKYSDPEEARANPPNAL------------- 257
           D   + + + +E Q+   F+ +R D H++FKK+    EA+ NP  ++             
Sbjct: 103 DLTQEHVKKSLEKQLSDRFRNWRCDLHKHFKKFPTVVEAKRNPHESVSNQEDWDYLCDRF 162

Query: 258 ------EQSRTNKAARQKQPYNYSSGSKSFLQRQYELTERRGQPVDRVALFRETHVRG-G 317
                  +S  N   R K P+++  GS+SF+Q   +++   G+ V ++ LF+  H +   
Sbjct: 163 SSEEFKRRSAINSVNRSKMPFHHRGGSRSFIQHGLQVSTENGEMVGQIELFKLVHWKSQD 222

Query: 318 TFVSQAAEDAHNQMLELKSQPIPKGSQPLFEDEICDQVLGRRPGYSKGL 347
            +++Q A D + +MLEL+ QPI KG   + E EIC++V G++ GY KGL
Sbjct: 223 GWINQEARDYYEKMLELQRQPIAKGVVAMTEAEICERVFGQKSGYVKGL 271

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BLAST of MELO3C035493.2 vs. NCBI nr
Match: XP_019080375.1 (PREDICTED: uncharacterized protein LOC104881475 [Vitis vinifera])

HSP 1 Score: 122.5 bits (306), Expect = 3.4e-24
Identity = 74/248 (29.84%), Postives = 127/248 (51.21%), Query Frame = 0 

Query: 120 RAQSRLLELERHVAING--RIPMTIAPGAEKPISPHAVRFSQAIGMCVRKTFPVRCLKWA 179
           R ++R + L++ +  NG   +P+TI P   K    +  + S  IG+ VR+  PVR  KW 
Sbjct: 10  RGKTRGVILDKLIEANGGKPLPITIKPSDGKQTGKYCEKLSNEIGLTVRQHAPVRVEKWK 69

Query: 180 DVGREYIEVVKGDLQRLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRYFKKYSDPEEAR 239
            + R  I  +   ++  F LD   + + + +E Q+   F+ +R D H++FKK+    EA+
Sbjct: 70  QMPRAEINTMLDRIKEKFALDLTQEHVKKSLEKQLSDRFRNWRCDLHKHFKKFPTVVEAK 129

Query: 240 ANPPNAL-------------------EQSRTNKAARQKQPYNYSSGSKSFLQRQYELTER 299
            NP  ++                    +S  N   R K P+++  GS+SF+Q   +++  
Sbjct: 130 RNPHESVSNQEDWDYLCDRFSSEEFKRRSAINSVNRSKMPFHHRGGSRSFIQHGLQVSTE 189

Query: 300 RGQPVDRVALFRETHVRGGTFVSQAAEDAHNQMLELKSQPIPKGSQPLFEDEICDQVLGR 347
            G+ V ++ LF+  H     + SQ       +MLEL+ QPI +G+  + E +IC++VLG+
Sbjct: 190 NGEMVGQIELFKLVH-----WKSQDGWINQEKMLELQRQPIAEGAVAMTEAKICERVLGQ 249

[Close]
BLAST of MELO3C035493.2 vs. TrEMBL
Match: tr|E5GC72|E5GC72_CUCME (CACTA en-spm transposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 4.4e-121
Identity = 227/275 (82.55%), Postives = 240/275 (87.27%), Query Frame = 0 

Query: 79  METDDMFLQFEEDLDNIAGGSSSLGDNTGSSSQQTTPTPRRRAQSRLLELERHVAINGRI 138
           METDDMFLQFE+DLDNIAGGSSS+GDNT SSSQQ TPTPRRRAQSRLLELERHVAING I
Sbjct: 1   METDDMFLQFEDDLDNIAGGSSSVGDNTESSSQQATPTPRRRAQSRLLELERHVAINGCI 60

Query: 139 PMTIAPGAEKPISPHAVRFSQAIGMCVRKTFPVRCLKWADVGREYIEVVKGDLQRLFVLD 198
           PMTIAPGAEKPISP+AV FSQAIG+CVRKTFPVRCLKW DVGREYIEVVKGDLQR FVLD
Sbjct: 61  PMTIAPGAEKPISPYAVHFSQAIGVCVRKTFPVRCLKWVDVGREYIEVVKGDLQRFFVLD 120

Query: 199 FNDQAMNRFVEHQMLTTFKEFRADCHRYFKKYSDPEEARANPPNAL-------------- 258
           FNDQAMNRFVEHQM+TTFKEF+ DCHR+FKKYSDPEEARANPPNAL              
Sbjct: 121 FNDQAMNRFVEHQMVTTFKEFQVDCHRHFKKYSDPEEARANPPNALVGRDEDWHFLYDHY 180

Query: 259 ------EQSRTNKAARQKQPYNYSSGSKSFLQRQYELTERRGQPVDRVALFRETHVRGGT 318
                 EQS TNKAARQKQPYN+SSGSKSFLQRQYEL ER+G+PVD V LFRETHVR GT
Sbjct: 181 IRRAFQEQSWTNKAARQKQPYNHSSGSKSFLQRQYELAERKGEPVDCVELFRETHVRAGT 240

Query: 319 FVSQAAEDAHNQMLELKSQPIPKGSQPLFEDEICD 334
           F+SQAAEDAHNQMLEL+SQP  +GSQPL EDEICD
Sbjct: 241 FMSQAAEDAHNQMLELQSQPTLEGSQPLSEDEICD 275

[Close]
BLAST of MELO3C035493.2 vs. TrEMBL
Match: tr|A0A1S4DZ93|A0A1S4DZ93_CUCME (uncharacterized protein LOC107991153 OS=Cucumis melo OX=3656 GN=LOC107991153 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.4e-63
Identity = 130/175 (74.29%), Postives = 145/175 (82.86%), Query Frame = 0 

Query: 71  MSYRRSNFMETDDMFLQFEEDLDNIAGGSSSLGDNTGSSSQ-QTTPTPRRRAQSRLLELE 130
           M Y R+NF+ETD MFL+FE+DLDN+AGGSSS+GDN GSSSQ   T TPRRR QSRLLELE
Sbjct: 1   MPYARNNFLETDVMFLEFEDDLDNLAGGSSSVGDNAGSSSQPPATQTPRRRVQSRLLELE 60

Query: 131 RHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGMCVRKTFPVRCLKWADVGREYIEVVKG 190
            HV + G IPM IAPGAE PI P+A+RFSQAIG+CV+KTF V  LKWAD+ REYIEVVKG
Sbjct: 61  CHVVVYGCIPMMIAPGAEMPIFPYAIRFSQAIGVCVQKTFFVCYLKWADIDREYIEVVKG 120

Query: 191 DLQRLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRYFKKYSDPEEARANPPNAL 245
           +LQR FVLDFNDQA+NRFVEHQMLTTFKEF  DCHR+FK      EARANPPN L
Sbjct: 121 NLQRFFVLDFNDQAINRFVEHQMLTTFKEFWGDCHRHFK------EARANPPNVL 169

[Close]
BLAST of MELO3C035493.2 vs. TrEMBL
Match: tr|A0A1S4DZJ7|A0A1S4DZJ7_CUCME (LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103493054 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 3.8e-32
Identity = 92/181 (50.83%), Postives = 105/181 (58.01%), Query Frame = 0 

Query: 65  SATLVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSLGDNTGSSSQ-QTTPTPRRRAQS 124
           S    I S+ R+NF+ETD MFL+F  DLDN+AGGSSS+ +N+ SSSQ   T TP+R  QS
Sbjct: 46  SVISTISSFPRNNFLETDVMFLKFAGDLDNLAGGSSSMDENSESSSQPSATLTPKRHTQS 105

Query: 125 RLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGMCVRKTFPVRCLKWADVGREY 184
           RLLELE +V                                               GREY
Sbjct: 106 RLLELECYV----------------------------------------------TGREY 165

Query: 185 IEVVKGDLQRLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRYFKKYSDPEEARANPPNA 244
           IEVVK DLQ  FVLDF+DQAMN  VE+QM  TFKEF  DCH+ FKKYSDPEEARANPPN 
Sbjct: 166 IEVVKADLQ-FFVLDFSDQAMNTSVEYQMSNTFKEFWGDCHKQFKKYSDPEEARANPPNL 179

[Close]
BLAST of MELO3C035493.2 vs. TrEMBL
Match: tr|B9F8Q4|B9F8Q4_ORYSJ (Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_11060 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.6e-14
Identity = 71/280 (25.36%), Postives = 126/280 (45.00%), Query Frame = 0 

Query: 87  QFEEDLDNIAGGSSSLGDNTGSSSQQTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGA 146
           Q    L N+A         +  +S  T+   + R  ++   L+R +   G  P+ +    
Sbjct: 5   QKTRQLRNLAHAQDRCSKRSAGTSSATS-VRKVRGINKGKGLDRLIKKTGGKPIKLNISV 64

Query: 147 E-KPISPHAVRFSQAIGMCVRKTFPVRCLKWADVGREYIEVVKGDLQRLFVLDFNDQAMN 206
           E +P+  +   FS  IG+  R   P++C+ W ++     E +   L+  F LD N++ + 
Sbjct: 65  ERRPVGENNELFSWEIGIITRYHAPIQCIGWQNMTEVDKEALHTLLKLKFDLDLNEENVK 124

Query: 207 RFVEHQMLTTFKEFRADCHRYFKKYSDPEEARANPPNALE-------------------- 266
             VE    +++K FR   + ++ K+   E AR NP  ALE                    
Sbjct: 125 GCVELMFSSSYKSFRHRFYEHYVKHGGGENARMNPHKALEDRLADWFWLCDHFETEEFQK 184

Query: 267 QSRTNKAARQKQPYNYSSGSKSFLQRQYELTERRGQPVDRVALFRETHVRGGTFVSQAAE 326
           +S   K  R   PY +  G+KSF+  Q+EL          + L++E +     + S  A 
Sbjct: 185 RSTIGKDNRSNLPYMHWKGTKSFVALQHEL------GCGDITLYKECYSNDKGWASSDAR 244

Query: 327 DAHNQMLELKSQPIPKGSQPLFEDEICDQVLGRRPGYSKG 346
           + H+QM+ ++ + + +   PL E +IC++VLG+  GY +G
Sbjct: 245 EKHDQMVRMQEESMQQDEIPLTEPQICEKVLGKAYGYIRG 277

[Close]
BLAST of MELO3C035493.2 vs. TrEMBL
Match: tr|A0A2P6QNU2|A0A2P6QNU2_ROSCH (Putative transposase, Ptta/En/Spm, plant OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0385011 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 6.1e-14
Identity = 69/269 (25.65%), Postives = 132/269 (49.07%), Query Frame = 0 

Query: 104 DNTGSSSQQ---TTPTPRRRAQSRLLELERHVA-INGRIPMTIAPGAEKPISPHAVRFSQ 163
           DN  S+S Q   T PT + R ++R +  ++ ++ +N +IP+T+     +P  P+A   + 
Sbjct: 105 DNVMSASNQDPPTGPTKKVRGKTRGVNADKVLSQLNAKIPVTLTEQNGRPTGPYAEMLAN 164

Query: 164 AIGMCVRKTFPVRCLKWADVGREYIEVVKGDLQRLFVLDFNDQAMNRFVEHQMLTTFKEF 223
            IG  VR   P+   KW  + +  ++ +   +   F +D +   + R+V     T F  F
Sbjct: 165 EIGFTVRNHAPLNVEKWKKIPKIDVDKLVKRITNKFDIDMSLLWVERYVITTCQTVFCNF 224

Query: 224 RADCHRYFKKYSDPEEARANPPNALE-------------------QSRTNKAARQKQPYN 283
           R    ++F+K+S  EEA  N  + ++                   +S  N   R K  ++
Sbjct: 225 RYKLKKHFEKFSTIEEAIENKHDDVKTQEEWEFLCARFSSEKFQIRSEKNAINRSKLTHH 284

Query: 284 YSSGSKSFLQRQYELTERRGQ---PVDRVALFRETHVRGGTFVSQAAEDAHNQMLELKSQ 343
           + +GSKSF+  Q ++  + G+    +DR     ++  +G    ++A  D   +M++++++
Sbjct: 285 HKAGSKSFMSHQEQIAAQTGEMQGAIDRFETEYKSTKKGWDLGAKAKWD---EMIKMRTE 344

Query: 344 PI-PKGSQPLFEDEICDQVLGRRPGYSKG 346
              P G++ + +DEIC +VLG + GY KG
Sbjct: 345 TTQPDGTRTMTDDEICAKVLGVKSGYIKG 370

The following BLAST results are available for this feature:
BLAST of MELO3C035493.2 vs. NCBI nr
Match NameE-valueIdentityDescription
ADN34071.16.6e-12182.55CACTA en-spm transposon protein [Cucumis melo subsp. melo][more]
XP_016901035.12.2e-6374.29PREDICTED: uncharacterized protein LOC107991153 [Cucumis melo] >XP_016901036.1 P... [more]
XP_016901155.15.7e-3250.83PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochond... [more]
XP_019078959.11.2e-2430.57PREDICTED: uncharacterized protein LOC104881002 [Vitis vinifera][more]
XP_019080375.13.4e-2429.84PREDICTED: uncharacterized protein LOC104881475 [Vitis vinifera][more]
BLAST of MELO3C035493.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C035493.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C035493.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|E5GC72|E5GC72_CUCME4.4e-12182.55CACTA en-spm transposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S4DZ93|A0A1S4DZ93_CUCME1.4e-6374.29uncharacterized protein LOC107991153 OS=Cucumis melo OX=3656 GN=LOC107991153 PE=... [more]
tr|A0A1S4DZJ7|A0A1S4DZJ7_CUCME3.8e-3250.83LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like O... [more]
tr|B9F8Q4|B9F8Q4_ORYSJ1.6e-1425.36Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_11060 PE... [more]
tr|A0A2P6QNU2|A0A2P6QNU2_ROSCH6.1e-1425.65Putative transposase, Ptta/En/Spm, plant OS=Rosa chinensis OX=74649 GN=RchiOBHm_... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004252Probable_transposase_24
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003824 catalytic activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0008483 transaminase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035493.2.1MELO3C035493.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004252Probable transposase, Ptta/En/Spm, plantPFAMPF03004Transposase_24coord: 241..318
e-value: 1.1E-12
score: 48.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 341..376
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 355..375
NoneNo IPR availablePANTHERPTHR33499FAMILY NOT NAMEDcoord: 105..389

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C035493.2Wax gourdmedwgoB176
MELO3C035493.2Cucumber (Gy14) v2cgybmedB009
MELO3C035493.2Cucurbita maxima (Rimu)cmamedB215
MELO3C035493.2Cucurbita maxima (Rimu)cmamedB451
MELO3C035493.2Cucurbita moschata (Rifu)cmomedB203
MELO3C035493.2Cucurbita moschata (Rifu)cmomedB439
MELO3C035493.2Cucurbita pepo (Zucchini)cpemedB563
MELO3C035493.2Cucurbita pepo (Zucchini)cpemedB583
MELO3C035493.2Wild cucumber (PI 183967)cpimedB011
MELO3C035493.2Cucumber (Chinese Long) v2cumedB010
MELO3C035493.2Cucumber (Chinese Long) v2cumedB173
MELO3C035493.2Melon (DHL92) v3.6.1medmedB072
MELO3C035493.2Bottle gourd (USVL1VR-Ls)lsimedB255
MELO3C035493.2Watermelon (Charleston Gray)medwcgB141
MELO3C035493.2Watermelon (97103) v1medwmB143
MELO3C035493.2Silver-seed gourdcarmedB0452
MELO3C035493.2Cucumber (Chinese Long) v3cucmedB009
MELO3C035493.2Watermelon (97103) v2medwmbB142