MELO3C035485.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C035485.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionLOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like
Locationchr12 : 6399757 .. 6402476 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCATCGGGAATACGATTATTCTCGACACCTTTTTGGGAAATCCTCTTTATAATCGATTCATTTCTGTATTTCACATAACTAAACCGAAAGGGAAAGGGAGTAACTAAACCGAAAGGGAAAGGGAGAAGAGAGAACCGTCGAGGCTTCACCGTCCGTAGCTCGCCACCTTCCATTCCGTCGTCGTCGTCGTCCCTCGCCGCCATCCTTCGTCGTTCTGCCGCCGTCTGCCACCTTAGGTAAGTTTAAATATAAAGTTTTTTTAGTTTAAATTTATGTTTTAGGGTCTTTTTAGGAGAATTGGGATTTTCTTTTGGAATAGATTTTTGTTTGTTAAATGTATTTTTGTATAGAATGTGTGTAATTTGTGGTTGAATTTAAATTTGAAGGGTTTAGGGTTTAGCATTTATAGTTAAATTAAAATTTGAATTGGGGAGGGGGTTATAGTTAAATTGAAATTTGAATGGTTTAGGGTTTAGGGTTTAATTGAATTGGGGGGGTTTATAGTTAAATTGAAAATTGAATTGAGGAAGGGGGGTTTATAGTTAAATTGAAATTTTTGTAGAGGGTTTATGTTTTTAATTGAAAATGTAATATGTGTGTTAAGATTTGTTTTGGGTATTCTGCAGTTATGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGGGTTTAGGGTTTAATTGAATTGGGGGGGTTTATAGTTAAATTGAAAATTGAATTGAGGAAGGGGGGTTTATAGTTAAATTGAAATTTTTGTAGAGGGTTTATGTTTTTAATTGAAAATGTAATATGTGTGTTAAGATTTGTTTTGGGTATTCTGCAGTTATGGTAGCCTGTTTGTGTTGAATATTTTTATTATTGATTTCAAATGGCTATCCGGCAGTTTTGGTAGCCTTTTTTGTTTTTAATTTGCTTCTGTTTGGAATGGTTTCAAGGGGTGGTAGTAGGATAGCTTGGAGTATTTTGTTGTTAATAATTAGGTTGTGTTGGCTATTCTGCACTTATGGTAGCCTCTGTAGTTTGATTCTAGCTATGTGTTCGTATTTGCTTATTGAATGTTTGTTTTCTATGTCCACAGTCATTATGTCATCGTCATATGCATGTAATAATTTTATAGAGACGGATGCTATGTTCCTCGAGTTTGAGGACGATTTAGATAACATCGCGGGAGGGTCGTCATCTGTGGGCGACAATACGGGTTGTCTAAGAATTTTCTTCACTTTAACTTACGATTATTTCATGTTCTTTTTTCTAACATTATATGTTATTATCGATTTATTGAGCAGTGTCTTCTTCTCAACAACCTGCAACTTCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTGGAGTTAGAGTGCCACGTTGCAATAAATGGACGCATTCCGATGACGATTGTCCCTGAAGCGGAGAAACCTATTTCCCCACACGTCGTTCGCTTCAGTCAGGCGATAGACGTGTGCGTGCGAAAGACATTTCTCATCCGTTGTCTTAAGTGGGCAAACGTTGGAAAAGAATACATTAAGGTCGTCAAGGGTGACCTCCAGGTAATTAAGTGCACTTCACGTTTATGATTTCATTTGAAACATATCTAACTTTAACCAATCTAATGTGTTATGTTTGTAATGTGTAGCGATTGTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTGTTGAGCATCAGATGCTCATGACCTTTAAAGAGTTCTGGGTTGACTGTCACAAACATTTCAAAAAGTACAGCGACCCGGATCGGAGGAGGCTCGTGCCAACCCACCAAATCTATTGGTTGGACGTCATGAGGATTGACACTTCCTTTGTGACCACTATATCAGCCATGCATTCCAGGTATTTGTCATGATTAATTATGATAACAAGTTTTAATATGTATAAGAAATAAACAATATAATTGTTTTAATGTAGGAGCAATCATGGACGAACAAGGCTGCTAGACAGAGGCAGCCTTACAATCATAATAGCGGGTTCAAGTCGTTTCTACAACGACAGTATGAGCTCGCTGAGAGAAAAGGAGAGTCGGTCGATTGTGTGGAGTTGTTCCGAGAAACACACATTCGTGGGACGTTCGTGTCGCAGGCCACCGAGGATGCACATGTAAGTTATGCCCTTATTAATTATTCTCTTTTATTATATATTTCTGCGCGTTACCTAACATAGTTTTTAAATTTGTTGCAGAATCAAATGCTGGAACTCCAATCTCAGCCTATCCCAGAGGGTAGTCAGCCACTCTCTGAGGATGAGATATGCGATCAGGTGTTGGGTAGACGACCAGACTACTCAAAAGGCCTTGGTTGGGGACCCAAGCCGAAGGCCCGAAGGACGACGTGTGCGAGCAGTTCGTCGACATCTTATTTGCAGTCCACACAAAAAGAGATTGAATTACAAGCTAAACTTAATGTGGATTGGATTGAAGTGCAAGATAGAAATCACCAAGTGTTAGCTTCACAAGTGGAAACAATGAAAAAGATGATGGAAGAATTAACTCGTGCACAATAGGGACCACCACAATGAAAAAGAGACTTACTAATATTTTGTGAACTTATTCGTATTATTAATTTTAAATCTTTTTTAATTTGTGTTTGTATATTTCTTAATTTATTAATGTATATTCAATTTGT

mRNA sequence

ATGAGCATCGGGAATACGATTATTCTCGACACCTTTTTGGGAAATCCTCTTTATAATCGATTCATTTCTGGAAAGGGAGTAACTAAACCGAAAGGGAAAGGGAGAAGAGAGAACCGTCGAGGCTTCACCGTCCGTAGCTCGCCACCTTCCATTCCGTCGTCGTCGTCGTCCCTCGCCGCCATCCTTCGTCGTTCTGCCGCCGTCTGCCACCTTAGGGTCTTTTTAGGAGAATTGGGATTTTCTTTTGGAATAGATTTTTGTTTGTTAAATGGTTTAATTGAATTGGGGGGGTTTATAGTTAAATTGAAAATTGAATTGAGGAAGGGGGAGACGGATGCTATGTTCCTCGAGTTTGAGGACGATTTAGATAACATCGCGGGAGGGTCGTCATCTGTGGGCGACAATACGGTGTCTTCTTCTCAACAACCTGCAACTTCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTGGAGTTAGAGTGCCACGTTGCAATAAATGGACGCATTCCGATGACGATTGTCCCTGAAGCGGAGAAACCTATTTCCCCACACGTCGTTCGCTTCAGTCAGGCGATAGACGTGTGCGTGCGAAAGACATTTCTCATCCGTTGTCTTAAGTGGGCAAACGTTGGAAAAGAATACATTAAGGTCGTCAAGGGTGACCTCCAGCGATTGTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTGTTGAGCATCAGATGCTCATGACCTTTAAAGAGTTCTGGGTTGACTGTCACAAACATTTCAAAAAGTACAGCGACCCGGATCGGAGGAGGCTCGTGCCAACCCACCAAATCTATTGGTTGGACGTCATGAGGATTGACACTTCCTTTGTGACCACTATATCAGCCATGCATTCCAGAAATAAACAATATAATTGTTTTAATGAGCAATCATGGACGAACAAGGCTGCTAGACAGAGGCAGCCTTACAATCATAATAGCGGGTTCAAGTCGTTTCTACAACGACAGTATGAGCTCGCTGAGAGAAAAGGAGAGTCGGTCGATTGTGTGGAGTTGTTCCGAGAAACACACATTCGTGGGACGTTCGTGTCGCAGGCCACCGAGGATGCACATAATCAAATGCTGGAACTCCAATCTCAGCCTATCCCAGAGGGTAGTCAGCCACTCTCTGAGGATGAGATATGCGATCAGGTGTTGGGTAGACGACCAGACTACTCAAAAGGCCTTGGTTGGGGACCCAAGCCGAAGGCCCGAAGGACGACGTGTGCGAGCAGTTCGTCGACATCTTATTTGCAGTCCACACAAAAAGAGATTGAATTACAAGCTAAACTTAATGTGGATTGGATTGAAGTGCAAGATAGAAATCACCAAGTGTTAGCTTCACAAGTGGAAACAATGAAAAAGATGATGGAAGAATTAACTCGTGCACAATAGGGACCACCACAATGAAAAAGAGACTTACTAATATTTTGTGAACTTATTCGTATTATTAATTTTAAATCTTTTTTAATTTGTGTTTGTATATTTCTTAATTTATTAATGTATATTCAATTTGT

Coding sequence (CDS)

ATGAGCATCGGGAATACGATTATTCTCGACACCTTTTTGGGAAATCCTCTTTATAATCGATTCATTTCTGGAAAGGGAGTAACTAAACCGAAAGGGAAAGGGAGAAGAGAGAACCGTCGAGGCTTCACCGTCCGTAGCTCGCCACCTTCCATTCCGTCGTCGTCGTCGTCCCTCGCCGCCATCCTTCGTCGTTCTGCCGCCGTCTGCCACCTTAGGGTCTTTTTAGGAGAATTGGGATTTTCTTTTGGAATAGATTTTTGTTTGTTAAATGGTTTAATTGAATTGGGGGGGTTTATAGTTAAATTGAAAATTGAATTGAGGAAGGGGGAGACGGATGCTATGTTCCTCGAGTTTGAGGACGATTTAGATAACATCGCGGGAGGGTCGTCATCTGTGGGCGACAATACGGTGTCTTCTTCTCAACAACCTGCAACTTCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTGGAGTTAGAGTGCCACGTTGCAATAAATGGACGCATTCCGATGACGATTGTCCCTGAAGCGGAGAAACCTATTTCCCCACACGTCGTTCGCTTCAGTCAGGCGATAGACGTGTGCGTGCGAAAGACATTTCTCATCCGTTGTCTTAAGTGGGCAAACGTTGGAAAAGAATACATTAAGGTCGTCAAGGGTGACCTCCAGCGATTGTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTGTTGAGCATCAGATGCTCATGACCTTTAAAGAGTTCTGGGTTGACTGTCACAAACATTTCAAAAAGTACAGCGACCCGGATCGGAGGAGGCTCGTGCCAACCCACCAAATCTATTGGTTGGACGTCATGAGGATTGACACTTCCTTTGTGACCACTATATCAGCCATGCATTCCAGAAATAAACAATATAATTGTTTTAATGAGCAATCATGGACGAACAAGGCTGCTAGACAGAGGCAGCCTTACAATCATAATAGCGGGTTCAAGTCGTTTCTACAACGACAGTATGAGCTCGCTGAGAGAAAAGGAGAGTCGGTCGATTGTGTGGAGTTGTTCCGAGAAACACACATTCGTGGGACGTTCGTGTCGCAGGCCACCGAGGATGCACATAATCAAATGCTGGAACTCCAATCTCAGCCTATCCCAGAGGGTAGTCAGCCACTCTCTGAGGATGAGATATGCGATCAGGTGTTGGGTAGACGACCAGACTACTCAAAAGGCCTTGGTTGGGGACCCAAGCCGAAGGCCCGAAGGACGACGTGTGCGAGCAGTTCGTCGACATCTTATTTGCAGTCCACACAAAAAGAGATTGAATTACAAGCTAAACTTAATGTGGATTGGATTGAAGTGCAAGATAGAAATCACCAAGTGTTAGCTTCACAAGTGGAAACAATGAAAAAGATGATGGAAGAATTAACTCGTGCACAATAG

Protein sequence

MSIGNTIILDTFLGNPLYNRFISGKGVTKPKGKGRRENRRGFTVRSSPPSIPSSSSSLAAILRRSAAVCHLRVFLGELGFSFGIDFCLLNGLIELGGFIVKLKIELRKGETDAMFLEFEDDLDNIAGGSSSVGDNTVSSSQQPATSTPRRRAQSRLLELECHVAINGRIPMTIVPEAEKPISPHVVRFSQAIDVCVRKTFLIRCLKWANVGKEYIKVVKGDLQRLFVLDFNDQAMNRFVEHQMLMTFKEFWVDCHKHFKKYSDPDRRRLVPTHQIYWLDVMRIDTSFVTTISAMHSRNKQYNCFNEQSWTNKAARQRQPYNHNSGFKSFLQRQYELAERKGESVDCVELFRETHIRGTFVSQATEDAHNQMLELQSQPIPEGSQPLSEDEICDQVLGRRPDYSKGLGWGPKPKARRTTCASSSSTSYLQSTQKEIELQAKLNVDWIEVQDRNHQVLASQVETMKKMMEELTRAQ
Homology
[Close]
BLAST of MELO3C035485.2 vs. NCBI nr
Match: ADN34071.1 (CACTA en-spm transposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 408.3 bits (1048), Expect = 3.6e-110
Identity = 216/287 (75.26%), Postives = 231/287 (80.49%), Query Frame = 0 

Query: 110 ETDAMFLEFEDDLDNIAGGSSSVGDNTVSSSQQPATSTPRRRAQSRLLELECHVAINGRI 169
           ETD MFL+FEDDLDNIAGGSSSVGDNT SSSQQ AT TPRRRAQSRLLELE HVAING I
Sbjct: 2   ETDDMFLQFEDDLDNIAGGSSSVGDNTESSSQQ-ATPTPRRRAQSRLLELERHVAINGCI 61

Query: 170 PMTIVPEAEKPISPHVVRFSQAIDVCVRKTFLIRCLKWANVGKEYIKVVKGDLQRLFVLD 229
           PMTI P AEKPISP+ V FSQAI VCVRKTF +RCLKW +VG+EYI+VVKGDLQR FVLD
Sbjct: 62  PMTIAPGAEKPISPYAVHFSQAIGVCVRKTFPVRCLKWVDVGREYIEVVKGDLQRFFVLD 121

Query: 230 FNDQAMNRFVEHQMLMTFKEFWVDCHKHFKKYSDPDRRRLVPTHQIYWLDVMRIDTSFVT 289
           FNDQAMNRFVEHQM+ TFKEF VDCH+HFKKYSDP+  R  P + +   D          
Sbjct: 122 FNDQAMNRFVEHQMVTTFKEFQVDCHRHFKKYSDPEEARANPPNALVGRD---------- 181

Query: 290 TISAMHSRNKQY--NCFNEQSWTNKAARQRQPYNHNSGFKSFLQRQYELAERKGESVDCV 349
                H     Y    F EQSWTNKAARQ+QPYNH+SG KSFLQRQYELAERKGE VDCV
Sbjct: 182 --EDWHFLYDHYIRRAFQEQSWTNKAARQKQPYNHSSGSKSFLQRQYELAERKGEPVDCV 241

Query: 350 ELFRETHIR-GTFVSQATEDAHNQMLELQSQPIPEGSQPLSEDEICD 394
           ELFRETH+R GTF+SQA EDAHNQMLELQSQP  EGSQPLSEDEICD
Sbjct: 242 ELFRETHVRAGTFMSQAAEDAHNQMLELQSQPTLEGSQPLSEDEICD 275

[Close]
BLAST of MELO3C035485.2 vs. NCBI nr
Match: XP_016901035.1 (PREDICTED: uncharacterized protein LOC107991153 [Cucumis melo] >XP_016901036.1 PREDICTED: uncharacterized protein LOC107991153 [Cucumis melo])

HSP 1 Score: 238.4 bits (607), Expect = 4.9e-59
Identity = 117/165 (70.91%), Postives = 132/165 (80.00%), Query Frame = 0 

Query: 110 ETDAMFLEFEDDLDNIAGGSSSVGDNTVSSSQQPATSTPRRRAQSRLLELECHVAINGRI 169
           ETD MFLEFEDDLDN+AGGSSSVGDN  SSSQ PAT TPRRR QSRLLELECHV + G I
Sbjct: 10  ETDVMFLEFEDDLDNLAGGSSSVGDNAGSSSQPPATQTPRRRVQSRLLELECHVVVYGCI 69

Query: 170 PMTIVPEAEKPISPHVVRFSQAIDVCVRKTFLIRCLKWANVGKEYIKVVKGDLQRLFVLD 229
           PM I P AE PI P+ +RFSQAI VCV+KTF +  LKWA++ +EYI+VVKG+LQR FVLD
Sbjct: 70  PMMIAPGAEMPIFPYAIRFSQAIGVCVQKTFFVCYLKWADIDREYIEVVKGNLQRFFVLD 129

Query: 230 FNDQAMNRFVEHQMLMTFKEFWVDCHKHFKKYSDPDRRRLVPTHQ 275
           FNDQA+NRFVEHQML TFKEFW DCH+HFK+        LV  H+
Sbjct: 130 FNDQAINRFVEHQMLTTFKEFWGDCHRHFKEARANPPNVLVGRHE 174

[Close]
BLAST of MELO3C035485.2 vs. NCBI nr
Match: XP_016901155.1 (PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like [Cucumis melo])

HSP 1 Score: 136.3 bits (342), Expect = 2.6e-28
Identity = 80/162 (49.38%), Postives = 92/162 (56.79%), Query Frame = 0 

Query: 110 ETDAMFLEFEDDLDNIAGGSSSVGDNTVSSSQQPATSTPRRRAQSRLLELECHVAINGRI 169
           ETD MFL+F  DLDN+AGGSSS+ +N+ SSSQ  AT TP+R  QSRLLELEC+V      
Sbjct: 61  ETDVMFLKFAGDLDNLAGGSSSMDENSESSSQPSATLTPKRHTQSRLLELECYV------ 120

Query: 170 PMTIVPEAEKPISPHVVRFSQAIDVCVRKTFLIRCLKWANVGKEYIKVVKGDLQRLFVLD 229
                                                    G+EYI+VVK DLQ  FVLD
Sbjct: 121 ----------------------------------------TGREYIEVVKADLQ-FFVLD 175

Query: 230 FNDQAMNRFVEHQMLMTFKEFWVDCHKHFKKYSDPDRRRLVP 272
           F+DQAMN  VE+QM  TFKEFW DCHK FKKYSDP+  R  P
Sbjct: 181 FSDQAMNTSVEYQMSNTFKEFWGDCHKQFKKYSDPEEARANP 175

[Close]
BLAST of MELO3C035485.2 vs. NCBI nr
Match: XP_019078959.1 (PREDICTED: uncharacterized protein LOC104881002 [Vitis vinifera])

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-25
Identity = 84/282 (29.79%), Postives = 138/282 (48.94%), Query Frame = 0 

Query: 169 IPMTIVPEAEKPISPHVVRFSQAIDVCVRKTFLIRCLKWANVGKEYIKVVKGDLQRLFVL 228
           +P+TI P   K    +  + S  I + VR+  L+R  KW  + +  I  +   ++  F L
Sbjct: 43  LPITIKPSNGKQTGKYCEKLSNEIGLIVRQHALVRVEKWKQMPRAEINTMLDRIKEKFAL 102

Query: 229 DFNDQAMNRFVEHQMLMTFKEFWVDCHKHFKKYSDPDRRRLVPTHQIYWLDVMRIDTSFV 288
           D   + + + +E Q+   F+ +  D HKHFKK+      +  P H+              
Sbjct: 103 DLTQEHVKKSLEKQLSDRFRNWRCDLHKHFKKFPTVVEAKRNP-HE-------------- 162

Query: 289 TTISAMHSRNKQYNC-------FNEQSWTNKAARQRQPYNHNSGFKSFLQRQYELAERKG 348
              S  +  +  Y C       F  +S  N   R + P++H  G +SF+Q   +++   G
Sbjct: 163 ---SVSNQEDWDYLCDRFSSEEFKRRSAINSVNRSKMPFHHRGGSRSFIQHGLQVSTENG 222

Query: 349 ESVDCVELFRETHIRGT--FVSQATEDAHNQMLELQSQPIPEGSQPLSEDEICDQVLGRR 408
           E V  +ELF+  H +    +++Q   D + +MLELQ QPI +G   ++E EIC++V G++
Sbjct: 223 EMVGQIELFKLVHWKSQDGWINQEARDYYEKMLELQRQPIAKGVVAMTEAEICERVFGQK 282

Query: 409 PDYSKGLGWGPKPKARRTTCASSSSTSYLQSTQKEIELQAKL 442
             Y KGLG+GPKP         S S S   S+++EIEL+ +L
Sbjct: 283 SGYVKGLGFGPKP--------ISFSKSRPSSSKREIELEHRL 298

[Close]
BLAST of MELO3C035485.2 vs. NCBI nr
Match: XP_019080375.1 (PREDICTED: uncharacterized protein LOC104881475 [Vitis vinifera])

HSP 1 Score: 122.1 bits (305), Expect = 5.1e-24
Identity = 89/300 (29.67%), Postives = 145/300 (48.33%), Query Frame = 0 

Query: 151 RAQSRLLELECHVAING--RIPMTIVPEAEKPISPHVVRFSQAIDVCVRKTFLIRCLKWA 210
           R ++R + L+  +  NG   +P+TI P   K    +  + S  I + VR+   +R  KW 
Sbjct: 10  RGKTRGVILDKLIEANGGKPLPITIKPSDGKQTGKYCEKLSNEIGLTVRQHAPVRVEKWK 69

Query: 211 NVGKEYIKVVKGDLQRLFVLDFNDQAMNRFVEHQMLMTFKEFWVDCHKHFKKYSDPDRRR 270
            + +  I  +   ++  F LD   + + + +E Q+   F+ +  D HKHFKK+      +
Sbjct: 70  QMPRAEINTMLDRIKEKFALDLTQEHVKKSLEKQLSDRFRNWRCDLHKHFKKFPTVVEAK 129

Query: 271 LVPTHQIYWLDVMRIDTSFVTTISAMHSRNKQYNC-------FNEQSWTNKAARQRQPYN 330
             P H+                 S  +  +  Y C       F  +S  N   R + P++
Sbjct: 130 RNP-HE-----------------SVSNQEDWDYLCDRFSSEEFKRRSAINSVNRSKMPFH 189

Query: 331 HNSGFKSFLQRQYELAERKGESVDCVELFRETHIRGTFVSQATEDAHNQMLELQSQPIPE 390
           H  G +SF+Q   +++   GE V  +ELF+  H    + SQ       +MLELQ QPI E
Sbjct: 190 HRGGSRSFIQHGLQVSTENGEMVGQIELFKLVH----WKSQDGWINQEKMLELQRQPIAE 249

Query: 391 GSQPLSEDEICDQVLGRRPDYSKGLGWGPKPKARRTTCASSSSTSYLQSTQKEIELQAKL 442
           G+  ++E +IC++VLG++  Y KGLG+GPKP         S S S   S+++EIEL+ +L
Sbjct: 250 GAVAMTEAKICERVLGQKSGYVKGLGFGPKP--------ISFSKSRPSSSEREIELEHRL 279

[Close]
BLAST of MELO3C035485.2 vs. TrEMBL
Match: tr|E5GC72|E5GC72_CUCME (CACTA en-spm transposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 2.4e-110
Identity = 216/287 (75.26%), Postives = 231/287 (80.49%), Query Frame = 0 

Query: 110 ETDAMFLEFEDDLDNIAGGSSSVGDNTVSSSQQPATSTPRRRAQSRLLELECHVAINGRI 169
           ETD MFL+FEDDLDNIAGGSSSVGDNT SSSQQ AT TPRRRAQSRLLELE HVAING I
Sbjct: 2   ETDDMFLQFEDDLDNIAGGSSSVGDNTESSSQQ-ATPTPRRRAQSRLLELERHVAINGCI 61

Query: 170 PMTIVPEAEKPISPHVVRFSQAIDVCVRKTFLIRCLKWANVGKEYIKVVKGDLQRLFVLD 229
           PMTI P AEKPISP+ V FSQAI VCVRKTF +RCLKW +VG+EYI+VVKGDLQR FVLD
Sbjct: 62  PMTIAPGAEKPISPYAVHFSQAIGVCVRKTFPVRCLKWVDVGREYIEVVKGDLQRFFVLD 121

Query: 230 FNDQAMNRFVEHQMLMTFKEFWVDCHKHFKKYSDPDRRRLVPTHQIYWLDVMRIDTSFVT 289
           FNDQAMNRFVEHQM+ TFKEF VDCH+HFKKYSDP+  R  P + +   D          
Sbjct: 122 FNDQAMNRFVEHQMVTTFKEFQVDCHRHFKKYSDPEEARANPPNALVGRD---------- 181

Query: 290 TISAMHSRNKQY--NCFNEQSWTNKAARQRQPYNHNSGFKSFLQRQYELAERKGESVDCV 349
                H     Y    F EQSWTNKAARQ+QPYNH+SG KSFLQRQYELAERKGE VDCV
Sbjct: 182 --EDWHFLYDHYIRRAFQEQSWTNKAARQKQPYNHSSGSKSFLQRQYELAERKGEPVDCV 241

Query: 350 ELFRETHIR-GTFVSQATEDAHNQMLELQSQPIPEGSQPLSEDEICD 394
           ELFRETH+R GTF+SQA EDAHNQMLELQSQP  EGSQPLSEDEICD
Sbjct: 242 ELFRETHVRAGTFMSQAAEDAHNQMLELQSQPTLEGSQPLSEDEICD 275

[Close]
BLAST of MELO3C035485.2 vs. TrEMBL
Match: tr|A0A1S4DZ93|A0A1S4DZ93_CUCME (uncharacterized protein LOC107991153 OS=Cucumis melo OX=3656 GN=LOC107991153 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 3.2e-59
Identity = 117/165 (70.91%), Postives = 132/165 (80.00%), Query Frame = 0 

Query: 110 ETDAMFLEFEDDLDNIAGGSSSVGDNTVSSSQQPATSTPRRRAQSRLLELECHVAINGRI 169
           ETD MFLEFEDDLDN+AGGSSSVGDN  SSSQ PAT TPRRR QSRLLELECHV + G I
Sbjct: 10  ETDVMFLEFEDDLDNLAGGSSSVGDNAGSSSQPPATQTPRRRVQSRLLELECHVVVYGCI 69

Query: 170 PMTIVPEAEKPISPHVVRFSQAIDVCVRKTFLIRCLKWANVGKEYIKVVKGDLQRLFVLD 229
           PM I P AE PI P+ +RFSQAI VCV+KTF +  LKWA++ +EYI+VVKG+LQR FVLD
Sbjct: 70  PMMIAPGAEMPIFPYAIRFSQAIGVCVQKTFFVCYLKWADIDREYIEVVKGNLQRFFVLD 129

Query: 230 FNDQAMNRFVEHQMLMTFKEFWVDCHKHFKKYSDPDRRRLVPTHQ 275
           FNDQA+NRFVEHQML TFKEFW DCH+HFK+        LV  H+
Sbjct: 130 FNDQAINRFVEHQMLTTFKEFWGDCHRHFKEARANPPNVLVGRHE 174

[Close]
BLAST of MELO3C035485.2 vs. TrEMBL
Match: tr|A0A1S4DZJ7|A0A1S4DZJ7_CUCME (LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103493054 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.7e-28
Identity = 80/162 (49.38%), Postives = 92/162 (56.79%), Query Frame = 0 

Query: 110 ETDAMFLEFEDDLDNIAGGSSSVGDNTVSSSQQPATSTPRRRAQSRLLELECHVAINGRI 169
           ETD MFL+F  DLDN+AGGSSS+ +N+ SSSQ  AT TP+R  QSRLLELEC+V      
Sbjct: 61  ETDVMFLKFAGDLDNLAGGSSSMDENSESSSQPSATLTPKRHTQSRLLELECYV------ 120

Query: 170 PMTIVPEAEKPISPHVVRFSQAIDVCVRKTFLIRCLKWANVGKEYIKVVKGDLQRLFVLD 229
                                                    G+EYI+VVK DLQ  FVLD
Sbjct: 121 ----------------------------------------TGREYIEVVKADLQ-FFVLD 175

Query: 230 FNDQAMNRFVEHQMLMTFKEFWVDCHKHFKKYSDPDRRRLVP 272
           F+DQAMN  VE+QM  TFKEFW DCHK FKKYSDP+  R  P
Sbjct: 181 FSDQAMNTSVEYQMSNTFKEFWGDCHKQFKKYSDPEEARANP 175

[Close]
BLAST of MELO3C035485.2 vs. TrEMBL
Match: tr|A0A2P6RFD0|A0A2P6RFD0_ROSCH (Putative transposase, Ptta/En/Spm, plant OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0486961 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 6.0e-13
Identity = 73/319 (22.88%), Postives = 144/319 (45.14%), Query Frame = 0 

Query: 124 NIAGGSSSVGDNTVSSSQQPATSTPRRRAQSRLLEL---ECHVAINGRIPMTIVPEAEKP 183
           +I   +  + D   S   Q +T+ P ++ + +   L   + H  +  +IP+T   E  +P
Sbjct: 85  SINATTEGLNDARTSVDIQGSTTGPEKKVRGKTRGLNVDKVHEQLGTKIPVTFKKENGRP 144

Query: 184 ISPHVVRFSQAIDVCVRKTFLIRCLKWANVGKEYIKVVKGDLQRLFVLDFNDQAMNRFVE 243
             P+   F+  I   +     +   KW  V  E +  +   +   + +D +   + R+V 
Sbjct: 145 TDPYAEMFANEIGFTIGNHAPLNVKKWKEVKPEDMTSLIKRITTKYNIDMSLPWVKRYVN 204

Query: 244 HQMLMTFKEFWVDCHKHFKKYSDPDRRRLVPTHQIYWLDVMRIDTSFVTTISAMHSRNKQ 303
                 F  F     KHF+++S  +   L   H+        + T         +  ++ 
Sbjct: 205 KSFGTVFANFRYKLKKHFEQFSTKE-EALENKHK-------DVKTEEEWAFLCTYFSSED 264

Query: 304 YNCFNEQSWTNKAARQRQPYNHNSGFKSFLQRQYELAERKGESVDCVELFRETH--IRGT 363
           +   +E+   N   R R  Y+H +G KSF+  Q ++  + GE +  +E F   +  I+  
Sbjct: 265 FQIVSEK---NSINRSRLKYHHKAGSKSFMLHQEQIDAQSGEMLGAIERFEMEYKSIKKG 324

Query: 364 FVSQATEDAHNQMLELQSQ-PIPEGSQPLSEDEICDQVLGRRPDYSKGLGWGPKPKARRT 423
           +     ++  +QM++++++  +P+G++ +++DEIC +VLG +  Y KG G+GP+P    T
Sbjct: 325 W-DLGAKELWDQMVKMRTETTLPDGTRTMNDDEICAKVLGVKSGYIKGCGFGPRPPPSST 384

Query: 424 TCASSSSTSYLQSTQKEIE 437
              S SS   +    KE+E
Sbjct: 385 ---SRSSLDEMSEKNKELE 388

[Close]
BLAST of MELO3C035485.2 vs. TrEMBL
Match: tr|A0A2P6QNU2|A0A2P6QNU2_ROSCH (Putative transposase, Ptta/En/Spm, plant OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0385011 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.0e-12
Identity = 74/299 (24.75%), Postives = 142/299 (47.49%), Query Frame = 0 

Query: 134 DNTVSSSQQ--PATSTPRRRAQSRLLELECHVA-INGRIPMTIVPEAEKPISPHVVRFSQ 193
           DN +S+S Q  P   T + R ++R +  +  ++ +N +IP+T+  +  +P  P+    + 
Sbjct: 105 DNVMSASNQDPPTGPTKKVRGKTRGVNADKVLSQLNAKIPVTLTEQNGRPTGPYAEMLAN 164

Query: 194 AIDVCVRKTFLIRCLKWANVGKEYIKVVKGDLQRLFVLDFNDQAMNRFVEHQMLMTFKEF 253
            I   VR    +   KW  + K  +  +   +   F +D +   + R+V       F  F
Sbjct: 165 EIGFTVRNHAPLNVEKWKKIPKIDVDKLVKRITNKFDIDMSLLWVERYVITTCQTVFCNF 224

Query: 254 WVDCHKHFKKYSDPDRRRLVPTHQIYWLDVMRIDTSFVTTISAMHSRNKQYNCFNEQSWT 313
                KHF+K+S  +   +   H     D ++    +   + A  S  K    F  +S  
Sbjct: 225 RYKLKKHFEKFSTIE-EAIENKH-----DDVKTQEEW-EFLCARFSSEK----FQIRSEK 284

Query: 314 NKAARQRQPYNHNSGFKSFLQRQYELAERKGESVDCVELFRETHIRGTFV--SQATEDAH 373
           N   R +  ++H +G KSF+  Q ++A + GE    ++ F ET  + T        +   
Sbjct: 285 NAINRSKLTHHHKAGSKSFMSHQEQIAAQTGEMQGAIDRF-ETEYKSTKKGWDLGAKAKW 344

Query: 374 NQMLELQSQPI-PEGSQPLSEDEICDQVLGRRPDYSKGLGWGPKPKARRTTCASSSSTS 427
           ++M++++++   P+G++ +++DEIC +VLG +  Y KG G+GP+P   R + +S +  S
Sbjct: 345 DEMIKMRTETTQPDGTRTMTDDEICAKVLGVKSGYIKGCGFGPRPPPSRVSHSSINEMS 391

The following BLAST results are available for this feature:
BLAST of MELO3C035485.2 vs. NCBI nr
Match NameE-valueIdentityDescription
ADN34071.13.6e-11075.26CACTA en-spm transposon protein [Cucumis melo subsp. melo][more]
XP_016901035.14.9e-5970.91PREDICTED: uncharacterized protein LOC107991153 [Cucumis melo] >XP_016901036.1 P... [more]
XP_016901155.12.6e-2849.38PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochond... [more]
XP_019078959.11.2e-2529.79PREDICTED: uncharacterized protein LOC104881002 [Vitis vinifera][more]
XP_019080375.15.1e-2429.67PREDICTED: uncharacterized protein LOC104881475 [Vitis vinifera][more]
BLAST of MELO3C035485.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C035485.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C035485.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|E5GC72|E5GC72_CUCME2.4e-11075.26CACTA en-spm transposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S4DZ93|A0A1S4DZ93_CUCME3.2e-5970.91uncharacterized protein LOC107991153 OS=Cucumis melo OX=3656 GN=LOC107991153 PE=... [more]
tr|A0A1S4DZJ7|A0A1S4DZJ7_CUCME1.7e-2849.38LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like O... [more]
tr|A0A2P6RFD0|A0A2P6RFD0_ROSCH6.0e-1322.88Putative transposase, Ptta/En/Spm, plant OS=Rosa chinensis OX=74649 GN=RchiOBHm_... [more]
tr|A0A2P6QNU2|A0A2P6QNU2_ROSCH1.0e-1224.75Putative transposase, Ptta/En/Spm, plant OS=Rosa chinensis OX=74649 GN=RchiOBHm_... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004252Probable_transposase_24
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003824 catalytic activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0008483 transaminase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035485.2.1MELO3C035485.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004252Probable transposase, Ptta/En/Spm, plantPFAMPF03004Transposase_24coord: 304..381
e-value: 8.1E-12
score: 45.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 403..422
NoneNo IPR availablePANTHERPTHR33499FAMILY NOT NAMEDcoord: 137..470

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C035485.2Cucumber (Gy14) v2cgybmedB009
MELO3C035485.2Cucurbita maxima (Rimu)cmamedB215
MELO3C035485.2Cucurbita maxima (Rimu)cmamedB451
MELO3C035485.2Cucurbita moschata (Rifu)cmomedB203
MELO3C035485.2Cucurbita moschata (Rifu)cmomedB439
MELO3C035485.2Cucurbita pepo (Zucchini)cpemedB563
MELO3C035485.2Cucurbita pepo (Zucchini)cpemedB583
MELO3C035485.2Wild cucumber (PI 183967)cpimedB011
MELO3C035485.2Cucumber (Chinese Long) v2cumedB010
MELO3C035485.2Cucumber (Chinese Long) v2cumedB173
MELO3C035485.2Melon (DHL92) v3.6.1medmedB072
MELO3C035485.2Bottle gourd (USVL1VR-Ls)lsimedB255
MELO3C035485.2Watermelon (Charleston Gray)medwcgB141
MELO3C035485.2Watermelon (97103) v1medwmB143
MELO3C035485.2Silver-seed gourdcarmedB0452
MELO3C035485.2Silver-seed gourdcarmedB1052
MELO3C035485.2Cucumber (Chinese Long) v3cucmedB009
MELO3C035485.2Watermelon (97103) v2medwmbB142
MELO3C035485.2Wax gourdmedwgoB176