MELO3C035443.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C035443.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionendoribonuclease Dicer homolog 2 isoform X2
Locationchr12 : 4884831 .. 4888421 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGCCACCTTTGCTTCAATCTACACCGCTGGCCGGTTTGTTCTCTTTGATTCCCTTGTTTCCACTATTTCTTCTTAATTGGGTGTTTGGTTCTGGGCCGTTTTTTAAATTCTGGATGATTTATAGGTTATGACAGGATGCAGAGAATAAGGTCTACTTGATTAAGGAGCTGGATAGGCTAATTGGTCAGGTGGGTAATCCTCTTTGGCCATTAATGTTGCTTAATTATATGTGGAATTTAGCGACAATTGAGCATCTGCATTTCTTATTATACTTGTATTGAGCTTAAGCTGAACTTCAGGTACTACTTTCTAACCAGCGGTTCAATTATTACATTGATTGAAAGTTCTTTTTTTTTTAAAtAATAATAATAATTTAGTGGTATAAATATCCTTTAGCGGCATCGTAGACTGTAATATGCATAGGGAAGAAGCGGTGGTTGATAGTTCCATGGAGGTCTTTGAAATATAATATATTACGTGTTTTTTAACTTCAAGATTTCCCCTCTCTTGAAGGAATATTACTACATCGAGAAATTTGGTTATTTATATTTAATTATCACTGTGAGATGGGATAGGATGATTTAAATGGAGCATATATGCATGTTATTTGCAATGACTACTGAGTTTATGGCTTAACAAAAACTTGCAGTAGTGGTTATCAGTCTTTAGCTTGAATTTTTTATTTTTACACCCCATCTTTTAGCTGTAGATATCGTTGCATTGCAATTTATGTTGATTTCCTATCCACTTAATTACTTTGGTCTTCTCTTGATTATTCAAATTGATCAATGGTACCTGTGCAGGGACCATCTTACATTTCAGTGGACGATACATTAAAAATCATAGCCTGCAGATGTTAATTATTTTTATTTGGTTGTATTGAAACTATAATTTAGTTGAGACCGCTGCACCATAATGGAAGGTGTTATGCATCATCAGTTTGAAGTCACGGAGGATTCTTGAGGAGACTTTCCTTTGCTTTTCTTTGGAACATTGCGTTAGGAATGAAAGTTTGAAGTTTAGTTCCCATATTCGCACCTCATTTTTGTAGTTATCGGTTATCCAGTCATTAACAAGGATTCTCTTCTAATTTTTCTTTTCTTAGGTTTCTTTTATTTGGGTTTGGCCTTTTTTCCTAGATAAACATTCCTTTGTGCTGTTACTTATGAAGCACAACTATGGTCTATTACTTCAACGTTATTTTTCACATTTAAGTGAAGCTATTTCTTAACTTCTTCCTGATTTCTGCTACTGCTTATGGCACTTGTGAATGAAAAATTATACATTCCCTAATCATTTATGTAAATTACTTTTGTTTTATACAGATGCCCTAGGGAGCACACTTGCTTCTTACTTGCACAAACCTCGTGTCTATGTTGGGTGCATGAAATCTGGTGAAGTATTCTCAGAACCGTGAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcTTGTCATTATTAGAATCTATGTCAGAAATAAAATATTGTGGCGTCTACTACTCACCTTTGTTATTTTTGGGTGTGAAAATGAAATGACGTGGTTGAATAGCAAACTTATTAGATTTGGAAACTGACTACATGGACAATTCTTCCATCTCAACTTGAAATGTGCGAATTTCTGATATGAGGGTTCTAAGAAGCATAGTTGTTGATCTGCAGCAACTTGTATAATATTTTATGATGTTTTTTGAAAATTCACACCAGAAAAGGGTTAAGAAATTCCCAAGTTTTACCAAGCAATAGCAAACCAAACTATCGAATCCTAGGATAGTTTACTGGTAGGAATTAAATAGATCTATAGGAAACATAGACACTTAAGTTTTGTTAAGGAGCCCATAATTGATGTCATGAGGTATTTTGTGGGTTCTGTTCGGTGTTAAAAGCCATAATGGTGTGGTAAAATGCTTGTAGAGCTCTTTGCTAGAATAGTTTATTGGTAGCTAGTAGGTCTATTGAGGATATAAGATGTATAGTATTTGTCGAAAGAATTGTTTCTGCTATGGCTCTTCAAACCCTATTGAGCTTATTGCTCCCAAAACACACTTGCTGGAAAACCAAATATATAGCTGGATCGACCTCTAGTTTGCAAACCCAGTCAAAGAAGAAACAAAATGAAATTGTGGAAGAGTTTCGTTGTGGCAAGGTATGCTTTTATGTGTCTTTACCTCCGTGGAATCCCTTCCTTCAGAAAAGTGTGTTGGTGGCTTATTTTATTGTATGCTTTTCTTCTTTAAGAGATCTGGATCCTTAAACTTCTTTCTTCATGTTCATCTATCGATGACAAATCTGTTCACGATCAACAAAAGAAAAGGAGTGCAACAACAGTACATACAACTGTACTAGTGTTTGCATAATGCTTAATTTGACAGGTAATTACATTTTCTTAGGTCAACATCATTGTTGCAACCTCAATTCTTGAAGAGGGCTTGGATGTCCAAGGTTGCAATTTAGTTATACGATTTGACCCGTCATCCACAGATTGAAATTTGGGCGGCACTTTTCATGATTTCTACCCTTTTTATATATATAATAAAAATTACACTATATCTACATATGGAAATTAATTGGTTTTGTTTTATTTTCTTATGTGTCCACATCCTCTTAGACTCGCAATCAAGGTACATTTTACAAACTATTTTAATTAATAAGATTTCTTATTGGATTTATATGTTGATTATTGATTTAATTCTTTTAATATTTTCTTCTTTTTAATAAAATATGTTATGTTGAGTAAAGTATGCGGACTTGCAAAATAGGCTAAAGCTCTTTTTAATAAAATATGAAAGCATTTTTAGTATTTCTGATAAGTTTGTTGGGAAATTCTGTTTATAAACGTTAATTTAGAAATTCTGAGTATTTGGAGTTTTTTCTAGTGCTTCATTTGAGAACTGAAGTGTTGGATGATACAAACATCATACAAATGGAGTTTTGTTGATGTATTTATGCAGGAGAAATTTATGCGGTAAGGTAGGCGTTTTGTATTATAATATAGAAATCATAATATAATAGGTGTTTATGGATCATGCGCGTGTTTTCTGTAGGCGTTTTGTATTTATGCGTTGCCTATAATATGTTTTGTTTTGGACTTTGTGTGAAGTTTTGTAATTCATTTAGCTGAATTTGGTATTTGCGATTCTGTTTTTCTTTTTCATATGGATGAATTTATAGATTTCATTTTTAGTGATGAAATTGTGTTGTGTACTTAAACAGTAGCATAATTTTGCCAAGCTTAGAAGTTACTATTGTTGAAGTGTGTATCTGCTGTGTTGTTGAAGTGAATGTGTATTGTGTTGTTGAAGTGAATGTGTATTGTGTTGTTGAAGTGAATGTGCTGTATTGTTGAATCAATTTTGTTTCCTTTTATTTTCTTACTAGGTTTTGCCAGAATTTATTCGAGCAGCGAAGCTATATTTGCGGCAATTCATTGATGTATAGGCATTTTTGTAGGTTTGGTAGGAA

mRNA sequence

ATGTTTGCCACCTTTGCTTCAATCTACACCGCTGGCCGCGGCATCGTAGACTGTAATATGCATAGGGAAGAAGCGGTGGTTGATAGTTCCATGGAGATTTCCCCTCTCTTGAAGGAATATTACTACATCGAGAAATTTGATGCCCTAGGGAGCACACTTGCTTCTTACTTGCACAAACCTCGTGTCTATGTTGGGTGCATGAAATCTGGTGAAGTATTCTCAGAACCGTCTATTGAGGATATAAGATGTATAGTATTTGTCGAAAGAATTGTTTCTGCTATGGCTCTTCAAACCCTATTGAGCTTATTGCTCCCAAAACACACTTGCTGGAAAACCAAATATATAGCTGGATCGACCTCTAGTTTGCAAACCCAGTCAAAGAAGAAACAAAATGAAATTGTGGAAGAGTTTCGTTGTGGCAAGGTTTTGCCAGAATTTATTCGAGCAGCGAAGCTATATTTGCGGCAATTCATTGATGTATAGGCATTTTTGTAGGTTTGGTAGGAA

Coding sequence (CDS)

ATGTTTGCCACCTTTGCTTCAATCTACACCGCTGGCCGCGGCATCGTAGACTGTAATATGCATAGGGAAGAAGCGGTGGTTGATAGTTCCATGGAGATTTCCCCTCTCTTGAAGGAATATTACTACATCGAGAAATTTGATGCCCTAGGGAGCACACTTGCTTCTTACTTGCACAAACCTCGTGTCTATGTTGGGTGCATGAAATCTGGTGAAGTATTCTCAGAACCGTCTATTGAGGATATAAGATGTATAGTATTTGTCGAAAGAATTGTTTCTGCTATGGCTCTTCAAACCCTATTGAGCTTATTGCTCCCAAAACACACTTGCTGGAAAACCAAATATATAGCTGGATCGACCTCTAGTTTGCAAACCCAGTCAAAGAAGAAACAAAATGAAATTGTGGAAGAGTTTCGTTGTGGCAAGGTTTTGCCAGAATTTATTCGAGCAGCGAAGCTATATTTGCGGCAATTCATTGATGTATAG

Protein sequence

MFATFASIYTAGRGIVDCNMHREEAVVDSSMEISPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEIVEEFRCGKVLPEFIRAAKLYLRQFIDV
Homology
[Close]
BLAST of MELO3C035443.2 vs. NCBI nr
Match: XP_008443670.1 (PREDICTED: endoribonuclease Dicer homolog 2 isoform X1 [Cucumis melo] >XP_008443671.1 PREDICTED: endoribonuclease Dicer homolog 2 isoform X1 [Cucumis melo] >XP_008443672.1 PREDICTED: endoribonuclease Dicer homolog 2 isoform X1 [Cucumis melo])

HSP 1 Score: 129.0 bits (323), Expect = 1.4e-26
Identity = 73/109 (66.97%), Postives = 82/109 (75.23%), Query Frame = 0 

Query: 34  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSA 93
           +PL     Y    D + + +A+ L  P+V   C+    +    SIEDIRCIVFVERIVSA
Sbjct: 343 NPLKSGCSYGSIGDNVEADMAAGLMTPKVV--CL-IASLLEYRSIEDIRCIVFVERIVSA 402

Query: 94  MALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEIVEEFRCGKV 143
           +ALQTLLSLLLPKHTCWKTKYIAGSTS LQTQSKKKQNEIVEEFRCGKV
Sbjct: 403 VALQTLLSLLLPKHTCWKTKYIAGSTSGLQTQSKKKQNEIVEEFRCGKV 448

[Close]
BLAST of MELO3C035443.2 vs. NCBI nr
Match: XP_008443674.1 (PREDICTED: endoribonuclease Dicer homolog 2 isoform X2 [Cucumis melo])

HSP 1 Score: 129.0 bits (323), Expect = 1.4e-26
Identity = 73/109 (66.97%), Postives = 82/109 (75.23%), Query Frame = 0 

Query: 34  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSA 93
           +PL     Y    D + + +A+ L  P+V   C+    +    SIEDIRCIVFVERIVSA
Sbjct: 343 NPLKSGCSYGSIGDNVEADMAAGLMTPKVV--CL-IASLLEYRSIEDIRCIVFVERIVSA 402

Query: 94  MALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEIVEEFRCGKV 143
           +ALQTLLSLLLPKHTCWKTKYIAGSTS LQTQSKKKQNEIVEEFRCGKV
Sbjct: 403 VALQTLLSLLLPKHTCWKTKYIAGSTSGLQTQSKKKQNEIVEEFRCGKV 448

[Close]
BLAST of MELO3C035443.2 vs. NCBI nr
Match: XP_008443676.1 (PREDICTED: endoribonuclease Dicer homolog 2 isoform X3 [Cucumis melo])

HSP 1 Score: 129.0 bits (323), Expect = 1.4e-26
Identity = 73/109 (66.97%), Postives = 82/109 (75.23%), Query Frame = 0 

Query: 34  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSA 93
           +PL     Y    D + + +A+ L  P+V   C+    +    SIEDIRCIVFVERIVSA
Sbjct: 256 NPLKSGCSYGSIGDNVEADMAAGLMTPKVV--CL-IASLLEYRSIEDIRCIVFVERIVSA 315

Query: 94  MALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEIVEEFRCGKV 143
           +ALQTLLSLLLPKHTCWKTKYIAGSTS LQTQSKKKQNEIVEEFRCGKV
Sbjct: 316 VALQTLLSLLLPKHTCWKTKYIAGSTSGLQTQSKKKQNEIVEEFRCGKV 361

[Close]
BLAST of MELO3C035443.2 vs. NCBI nr
Match: XP_004139098.1 (PREDICTED: endoribonuclease Dicer homolog 2 isoform X1 [Cucumis sativus] >XP_011660214.1 PREDICTED: endoribonuclease Dicer homolog 2 isoform X1 [Cucumis sativus] >XP_011660215.1 PREDICTED: endoribonuclease Dicer homolog 2 isoform X1 [Cucumis sativus] >KGN66658.1 hypothetical protein Csa_1G654870 [Cucumis sativus])

HSP 1 Score: 127.9 bits (320), Expect = 3.1e-26
Identity = 70/96 (72.92%), Postives = 78/96 (81.25%), Query Frame = 0 

Query: 47  DALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLPK 106
           D L + +A+ L  P+V   C+    +    SIEDIRCIVFVERIVSA+ALQTLLSLLLPK
Sbjct: 356 DNLEADMAAGLMTPKVV--CL-IASLLEYRSIEDIRCIVFVERIVSAVALQTLLSLLLPK 415

Query: 107 HTCWKTKYIAGSTSSLQTQSKKKQNEIVEEFRCGKV 143
           +TCWKTKYIAGSTS LQTQSKKKQNEIVEEFRCGKV
Sbjct: 416 YTCWKTKYIAGSTSGLQTQSKKKQNEIVEEFRCGKV 448

[Close]
BLAST of MELO3C035443.2 vs. NCBI nr
Match: XP_011660217.1 (PREDICTED: endoribonuclease Dicer homolog 2 isoform X2 [Cucumis sativus])

HSP 1 Score: 127.9 bits (320), Expect = 3.1e-26
Identity = 70/96 (72.92%), Postives = 78/96 (81.25%), Query Frame = 0 

Query: 47  DALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLPK 106
           D L + +A+ L  P+V   C+    +    SIEDIRCIVFVERIVSA+ALQTLLSLLLPK
Sbjct: 309 DNLEADMAAGLMTPKVV--CL-IASLLEYRSIEDIRCIVFVERIVSAVALQTLLSLLLPK 368

Query: 107 HTCWKTKYIAGSTSSLQTQSKKKQNEIVEEFRCGKV 143
           +TCWKTKYIAGSTS LQTQSKKKQNEIVEEFRCGKV
Sbjct: 369 YTCWKTKYIAGSTSGLQTQSKKKQNEIVEEFRCGKV 401

[Close]
BLAST of MELO3C035443.2 vs. TAIR10
Match: AT3G03300.1 (dicer-like 2)

HSP 1 Score: 83.2 bits (204), Expect = 1.6e-16
Identity = 38/66 (57.58%), Postives = 55/66 (83.33%), Query Frame = 0 

Query: 77  SIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEIVEE 136
           S+E+IRCI+FV+R+++A+ L++LL+ +LP    WKTKY+AG+ S LQ Q++KKQNEIVE+
Sbjct: 384 SLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVAGNNSGLQNQTRKKQNEIVED 443

Query: 137 FRCGKV 143
           FR G V
Sbjct: 444 FRRGLV 449

[Close]
BLAST of MELO3C035443.2 vs. TAIR10
Match: AT5G53340.1 (Galactosyltransferase family protein)

HSP 1 Score: 56.2 bits (134), Expect = 2.1e-08
Identity = 23/31 (74.19%), Postives = 28/31 (90.32%), Query Frame = 0 

Query: 47  DALGSTLASYLHKPRVYVGCMKSGEVFSEPS 78
           DALG+TLA++L  PR Y+GCMKSGEVFSEP+
Sbjct: 224 DALGTTLAAHLENPRAYIGCMKSGEVFSEPN 254

[Close]
BLAST of MELO3C035443.2 vs. TAIR10
Match: AT1G32930.1 (Galactosyltransferase family protein)

HSP 1 Score: 44.3 bits (103), Expect = 8.3e-05
Identity = 18/31 (58.06%), Postives = 24/31 (77.42%), Query Frame = 0 

Query: 49  LGSTLASYLHKPRVYVGCMKSGEVFSEPSIE 80
           LGSTLA +  KPRVY+GCMKSG V ++  ++
Sbjct: 245 LGSTLARHRSKPRVYIGCMKSGPVLAQKGVK 275

[Close]
BLAST of MELO3C035443.2 vs. TAIR10
Match: AT1G77810.1 (Galactosyltransferase family protein)

HSP 1 Score: 42.4 bits (98), Expect = 3.2e-04
Identity = 19/40 (47.50%), Postives = 26/40 (65.00%), Query Frame = 0 

Query: 49  LGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVE 89
           L STLA +  KPRVY+GCMKSG V ++  +   R + + E
Sbjct: 233 LASTLARHRSKPRVYIGCMKSGPVLAQNLLNCFRTVKYHE 272

[Close]
BLAST of MELO3C035443.2 vs. TAIR10
Match: AT1G22015.1 (Galactosyltransferase family protein)

HSP 1 Score: 42.4 bits (98), Expect = 3.2e-04
Identity = 18/27 (66.67%), Postives = 22/27 (81.48%), Query Frame = 0 

Query: 49  LGSTLASYLHKPRVYVGCMKSGEVFSE 76
           L STLAS+  KPRVY+GCMKSG V ++
Sbjct: 241 LASTLASHRSKPRVYIGCMKSGPVLTK 267

[Close]
BLAST of MELO3C035443.2 vs. Swiss-Prot
Match: sp|Q3EBC8|DCL2_ARATH (Endoribonuclease Dicer homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At3g03300 PE=1 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 2.9e-15
Identity = 38/66 (57.58%), Postives = 55/66 (83.33%), Query Frame = 0 

Query: 77  SIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEIVEE 136
           S+E+IRCI+FV+R+++A+ L++LL+ +LP    WKTKY+AG+ S LQ Q++KKQNEIVE+
Sbjct: 384 SLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVAGNNSGLQNQTRKKQNEIVED 443

Query: 137 FRCGKV 143
           FR G V
Sbjct: 444 FRRGLV 449

[Close]
BLAST of MELO3C035443.2 vs. Swiss-Prot
Match: sp|Q10HL3|DCL2A_ORYSJ (Endoribonuclease Dicer homolog 2a OS=Oryza sativa subsp. japonica OX=39947 GN=DCL2A PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-08
Identity = 31/65 (47.69%), Postives = 47/65 (72.31%), Query Frame = 0 

Query: 78  IEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEIVEEF 137
           ++D+RCIVFVER+++++ L+ LLS  + + + W  K++AGS   L +QS+K   EIVE F
Sbjct: 395 MQDLRCIVFVERVITSIVLEHLLS-SIHQMSGWNVKHMAGSRPGLLSQSRKNHTEIVESF 454

Query: 138 RCGKV 143
           R GKV
Sbjct: 455 RKGKV 458

[Close]
BLAST of MELO3C035443.2 vs. Swiss-Prot
Match: sp|Q69LX2|DCL2B_ORYSJ (Endoribonuclease Dicer homolog 2b OS=Oryza sativa subsp. japonica OX=39947 GN=DCL2B PE=2 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-08
Identity = 30/65 (46.15%), Postives = 47/65 (72.31%), Query Frame = 0 

Query: 78  IEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEIVEEF 137
           ++D+RCIVFV+R+++++ L+ LLS  + + + W  K++AGS   L +QS+K   EIVE F
Sbjct: 395 MQDLRCIVFVQRVITSIVLEPLLS-SIHQMSGWNVKHMAGSRPGLLSQSRKNHTEIVESF 454

Query: 138 RCGKV 143
           R GKV
Sbjct: 455 RKGKV 458

[Close]
BLAST of MELO3C035443.2 vs. Swiss-Prot
Match: sp|Q94F27|B3GTB_ARATH (Hydroxyproline O-galactosyltransferase HPGT1 OS=Arabidopsis thaliana OX=3702 GN=HPTG1 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.8e-07
Identity = 23/31 (74.19%), Postives = 28/31 (90.32%), Query Frame = 0 

Query: 47  DALGSTLASYLHKPRVYVGCMKSGEVFSEPS 78
           DALG+TLA++L  PR Y+GCMKSGEVFSEP+
Sbjct: 224 DALGTTLAAHLENPRAYIGCMKSGEVFSEPN 254

[Close]
BLAST of MELO3C035443.2 vs. TrEMBL
Match: tr|A0A1S3B9B7|A0A1S3B9B7_CUCME (endoribonuclease Dicer homolog 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487216 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 9.3e-27
Identity = 73/109 (66.97%), Postives = 82/109 (75.23%), Query Frame = 0 

Query: 34  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSA 93
           +PL     Y    D + + +A+ L  P+V   C+    +    SIEDIRCIVFVERIVSA
Sbjct: 343 NPLKSGCSYGSIGDNVEADMAAGLMTPKVV--CL-IASLLEYRSIEDIRCIVFVERIVSA 402

Query: 94  MALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEIVEEFRCGKV 143
           +ALQTLLSLLLPKHTCWKTKYIAGSTS LQTQSKKKQNEIVEEFRCGKV
Sbjct: 403 VALQTLLSLLLPKHTCWKTKYIAGSTSGLQTQSKKKQNEIVEEFRCGKV 448

[Close]
BLAST of MELO3C035443.2 vs. TrEMBL
Match: tr|A0A1S3B8N2|A0A1S3B8N2_CUCME (endoribonuclease Dicer homolog 2 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103487216 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 9.3e-27
Identity = 73/109 (66.97%), Postives = 82/109 (75.23%), Query Frame = 0 

Query: 34  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSA 93
           +PL     Y    D + + +A+ L  P+V   C+    +    SIEDIRCIVFVERIVSA
Sbjct: 256 NPLKSGCSYGSIGDNVEADMAAGLMTPKVV--CL-IASLLEYRSIEDIRCIVFVERIVSA 315

Query: 94  MALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEIVEEFRCGKV 143
           +ALQTLLSLLLPKHTCWKTKYIAGSTS LQTQSKKKQNEIVEEFRCGKV
Sbjct: 316 VALQTLLSLLLPKHTCWKTKYIAGSTSGLQTQSKKKQNEIVEEFRCGKV 361

[Close]
BLAST of MELO3C035443.2 vs. TrEMBL
Match: tr|A0A1S3B8K1|A0A1S3B8K1_CUCME (endoribonuclease Dicer homolog 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487216 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 9.3e-27
Identity = 73/109 (66.97%), Postives = 82/109 (75.23%), Query Frame = 0 

Query: 34  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSA 93
           +PL     Y    D + + +A+ L  P+V   C+    +    SIEDIRCIVFVERIVSA
Sbjct: 343 NPLKSGCSYGSIGDNVEADMAAGLMTPKVV--CL-IASLLEYRSIEDIRCIVFVERIVSA 402

Query: 94  MALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEIVEEFRCGKV 143
           +ALQTLLSLLLPKHTCWKTKYIAGSTS LQTQSKKKQNEIVEEFRCGKV
Sbjct: 403 VALQTLLSLLLPKHTCWKTKYIAGSTSGLQTQSKKKQNEIVEEFRCGKV 448

[Close]
BLAST of MELO3C035443.2 vs. TrEMBL
Match: tr|A0A0A0LY14|A0A0A0LY14_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G654870 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.1e-26
Identity = 70/96 (72.92%), Postives = 78/96 (81.25%), Query Frame = 0 

Query: 47  DALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLPK 106
           D L + +A+ L  P+V   C+    +    SIEDIRCIVFVERIVSA+ALQTLLSLLLPK
Sbjct: 356 DNLEADMAAGLMTPKVV--CL-IASLLEYRSIEDIRCIVFVERIVSAVALQTLLSLLLPK 415

Query: 107 HTCWKTKYIAGSTSSLQTQSKKKQNEIVEEFRCGKV 143
           +TCWKTKYIAGSTS LQTQSKKKQNEIVEEFRCGKV
Sbjct: 416 YTCWKTKYIAGSTSGLQTQSKKKQNEIVEEFRCGKV 448

[Close]
BLAST of MELO3C035443.2 vs. TrEMBL
Match: tr|V4UQW2|V4UQW2_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10010912mg PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.5e-16
Identity = 45/65 (69.23%), Postives = 56/65 (86.15%), Query Frame = 0 

Query: 78  IEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEIVEEF 137
           +EDIRCI+FVER+++A+ LQ+LLS LLP+H  WKTKYIAG+ S +Q QS+KKQNEIVEEF
Sbjct: 385 VEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEF 444

Query: 138 RCGKV 143
           R G V
Sbjct: 445 RRGLV 449

The following BLAST results are available for this feature:
BLAST of MELO3C035443.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008443670.11.4e-2666.97PREDICTED: endoribonuclease Dicer homolog 2 isoform X1 [Cucumis melo] >XP_008443... [more]
XP_008443674.11.4e-2666.97PREDICTED: endoribonuclease Dicer homolog 2 isoform X2 [Cucumis melo][more]
XP_008443676.11.4e-2666.97PREDICTED: endoribonuclease Dicer homolog 2 isoform X3 [Cucumis melo][more]
XP_004139098.13.1e-2672.92PREDICTED: endoribonuclease Dicer homolog 2 isoform X1 [Cucumis sativus] >XP_011... [more]
XP_011660217.13.1e-2672.92PREDICTED: endoribonuclease Dicer homolog 2 isoform X2 [Cucumis sativus][more]
BLAST of MELO3C035443.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G03300.11.6e-1657.58dicer-like 2[more]
AT5G53340.12.1e-0874.19Galactosyltransferase family protein[more]
AT1G32930.18.3e-0558.06Galactosyltransferase family protein[more]
AT1G77810.13.2e-0447.50Galactosyltransferase family protein[more]
AT1G22015.13.2e-0466.67Galactosyltransferase family protein[more]
BLAST of MELO3C035443.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q3EBC8|DCL2_ARATH2.9e-1557.58Endoribonuclease Dicer homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At3g03300 PE... [more]
sp|Q10HL3|DCL2A_ORYSJ2.0e-0847.69Endoribonuclease Dicer homolog 2a OS=Oryza sativa subsp. japonica OX=39947 GN=DC... [more]
sp|Q69LX2|DCL2B_ORYSJ3.4e-0846.15Endoribonuclease Dicer homolog 2b OS=Oryza sativa subsp. japonica OX=39947 GN=DC... [more]
sp|Q94F27|B3GTB_ARATH3.8e-0774.19Hydroxyproline O-galactosyltransferase HPGT1 OS=Arabidopsis thaliana OX=3702 GN=... [more]
BLAST of MELO3C035443.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B9B7|A0A1S3B9B7_CUCME9.3e-2766.97endoribonuclease Dicer homolog 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487... [more]
tr|A0A1S3B8N2|A0A1S3B8N2_CUCME9.3e-2766.97endoribonuclease Dicer homolog 2 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103487... [more]
tr|A0A1S3B8K1|A0A1S3B8K1_CUCME9.3e-2766.97endoribonuclease Dicer homolog 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487... [more]
tr|A0A0A0LY14|A0A0A0LY14_CUCSA2.1e-2672.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G654870 PE=3 SV=1[more]
tr|V4UQW2|V4UQW2_9ROSI1.5e-1669.23Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10010912mg PE=3 ... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090501 RNA phosphodiester bond hydrolysis
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process GO:0006396 RNA processing
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004525 ribonuclease III activity
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035443.2.1MELO3C035443.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 79..142
e-value: 8.9E-6
score: 26.8
NoneNo IPR availablePANTHERPTHR14950:SF19ENDORIBONUCLEASE DICER HOMOLOG 2coord: 78..142
NoneNo IPR availablePANTHERPTHR14950HELICASE-RELATEDcoord: 78..142

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C035443.2Cucumber (Gy14) v2cgybmedB009
MELO3C035443.2Cucumber (Gy14) v1cgymedB371
MELO3C035443.2Cucurbita maxima (Rimu)cmamedB215
MELO3C035443.2Cucurbita maxima (Rimu)cmamedB451
MELO3C035443.2Cucurbita moschata (Rifu)cmomedB203
MELO3C035443.2Cucurbita moschata (Rifu)cmomedB439
MELO3C035443.2Cucurbita pepo (Zucchini)cpemedB005
MELO3C035443.2Wild cucumber (PI 183967)cpimedB011
MELO3C035443.2Cucumber (Chinese Long) v2cumedB010
MELO3C035443.2Bottle gourd (USVL1VR-Ls)lsimedB183
MELO3C035443.2Watermelon (Charleston Gray)medwcgB141
MELO3C035443.2Watermelon (97103) v1medwmB143
MELO3C035443.2Cucumber (Chinese Long) v3cucmedB009
MELO3C035443.2Watermelon (97103) v2medwmbB142
MELO3C035443.2Wax gourdmedwgoB176