MELO3C035420.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C035420.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionDTW domain-containing protein
Locationchr12 : 13128039 .. 13128394 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGACAGCTGCTGCCACCACCACCAGCATACATCAGTTTTCTTGCAGGAATGGCAGGGTTGGGGCTCCACCTCTCCTGTTCCCACCATGGTTACAAAAATTATCAACGAATTGAAGGTCTTGGAGAAAAATGTTGACGCCCAAATGAGTTTTGGTGGTAATGGCGGCAAACTTCAGGTTTGCCACAAACCCATTGGATATGTTTTCCGCCTCTTCTTTTACTTTGTTAAGTTTTGGTTGATACTGCAATAGAGTCTATTAAATCCTATACTCATTTATTGTTTCTATATCCCTTGCAATCATTCAACTCGATCATCTAGATATTGCTAATGGAGTAAACGGCAGCTTGGAATTTTAG

mRNA sequence

CGACAGCTGCTGCCACCACCACCAGCATACATCAGTTTTCTTGCAGGAATGGCAGGGTTGGGGCTCCACCTCTCCTGTTCCCACCATGGTTACAAAAATTATCAACGAATTGAAGGTCTTGGAGAAAAATGTTGACGCCCAAATGAGTTTTGGTGGTAATGGCGGCAAACTTCAGGTTTGCCACAAACCCATTGGATATGTTTTCCGCCTCTTCTTTTACTTTGTTAAGTTTTGGTTGATACTGCAATAGAGTCTATTAAATCCTATACTCATTTATTGTTTCTATATCCCTTGCAATCATTCAACTCGATCATCTAGATATTGCTAATGGAGTAAACGGCAGCTTGGAATTTTAG

Coding sequence (CDS)

ATGGTTACAAAAATTATCAACGAATTGAAGGTCTTGGAGAAAAATGTTGACGCCCAAATGAGTTTTGGTGGTAATGGCGGCAAACTTCAGGTTTGCCACAAACCCATTGGATATGTTTTCCGCCTCTTCTTTTACTTTGTTAAGTTTTGGTTGATACTGCAATAG

Protein sequence

MVTKIINELKVLEKNVDAQMSFGGNGGKLQVCHKPIGYVFRLFFYFVKFWLILQ
Homology
[Close]
BLAST of MELO3C035420.2 vs. NCBI nr
Match: XP_016900530.1 (PREDICTED: uncharacterized protein LOC103490622 [Cucumis melo])

HSP 1 Score: 103.6 bits (257), Expect = 2.1e-19
Identity = 50/54 (92.59%), Postives = 52/54 (96.30%), Query Frame = 0 

Query: 1   MVTKIINELKVLEKNVDAQMSFGGNGGKLQVCHKPIGYVFRLFFYFVKFWLILQ 55
           MVT+II+ELKVLEKNVDAQMSFGGNGGKLQVCHKPIGYVFRLFFYFV  WLILQ
Sbjct: 64  MVTEIIDELKVLEKNVDAQMSFGGNGGKLQVCHKPIGYVFRLFFYFVTSWLILQ 117

[Close]
BLAST of MELO3C035420.2 vs. NCBI nr
Match: XP_004139941.1 (PREDICTED: uncharacterized protein LOC101203963 [Cucumis sativus] >KGN46744.1 hypothetical protein Csa_6G128540 [Cucumis sativus])

HSP 1 Score: 56.2 bits (134), Expect = 3.9e-05
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 0 

Query: 1  MVTKIINELKVLEKNVDAQMSFGGNGGKLQ 31
          MVT+II+ELKVLEK VDAQMSFGGNGGKLQ
Sbjct: 68 MVTEIIDELKVLEKTVDAQMSFGGNGGKLQ 97

[Close]
BLAST of MELO3C035420.2 vs. NCBI nr
Match: XP_022947638.1 (uncharacterized protein LOC111451439 [Cucurbita moschata])

HSP 1 Score: 56.2 bits (134), Expect = 3.9e-05
Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = 0 

Query: 1   MVTKIINELKVLEKNVDAQMSFGGNGGKLQ 31
           MVT+II ELK LEKN+DAQMSFGGNGGKLQ
Sbjct: 75  MVTEIIEELKALEKNIDAQMSFGGNGGKLQ 104

[Close]
BLAST of MELO3C035420.2 vs. NCBI nr
Match: XP_022970715.1 (uncharacterized protein LOC111469615 [Cucurbita maxima] >XP_022970717.1 uncharacterized protein LOC111469615 [Cucurbita maxima])

HSP 1 Score: 56.2 bits (134), Expect = 3.9e-05
Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = 0 

Query: 1   MVTKIINELKVLEKNVDAQMSFGGNGGKLQ 31
           MVT+II ELK LEKN+DAQMSFGGNGGKLQ
Sbjct: 75  MVTEIIEELKALEKNIDAQMSFGGNGGKLQ 104

[Close]
BLAST of MELO3C035420.2 vs. NCBI nr
Match: XP_023532105.1 (uncharacterized protein LOC111794368 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 56.2 bits (134), Expect = 3.9e-05
Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = 0 

Query: 1   MVTKIINELKVLEKNVDAQMSFGGNGGKLQ 31
           MVT+II ELK LEKN+DAQMSFGGNGGKLQ
Sbjct: 75  MVTEIIEELKALEKNIDAQMSFGGNGGKLQ 104

[Close]
BLAST of MELO3C035420.2 vs. TAIR10
Match: AT1G03687.1 (DTW domain-containing protein)

HSP 1 Score: 40.0 bits (92), Expect = 5.3e-04
Identity = 17/29 (58.62%), Postives = 24/29 (82.76%), Query Frame = 0 

Query: 2  VTKIINELKVLEKNVDAQMSFGGNGGKLQ 31
          V +I+++LKVLE  +D+ + FGGNGGKLQ
Sbjct: 70 VKQIVDDLKVLECKLDSPIDFGGNGGKLQ 98

[Close]
BLAST of MELO3C035420.2 vs. TrEMBL
Match: tr|A0A1S4DXU3|A0A1S4DXU3_CUCME (uncharacterized protein LOC103490622 OS=Cucumis melo OX=3656 GN=LOC103490622 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.4e-19
Identity = 50/54 (92.59%), Postives = 52/54 (96.30%), Query Frame = 0 

Query: 1   MVTKIINELKVLEKNVDAQMSFGGNGGKLQVCHKPIGYVFRLFFYFVKFWLILQ 55
           MVT+II+ELKVLEKNVDAQMSFGGNGGKLQVCHKPIGYVFRLFFYFV  WLILQ
Sbjct: 64  MVTEIIDELKVLEKNVDAQMSFGGNGGKLQVCHKPIGYVFRLFFYFVTSWLILQ 117

[Close]
BLAST of MELO3C035420.2 vs. TrEMBL
Match: tr|A0A0A0KD21|A0A0A0KD21_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G128540 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.6e-05
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 0 

Query: 1  MVTKIINELKVLEKNVDAQMSFGGNGGKLQ 31
          MVT+II+ELKVLEK VDAQMSFGGNGGKLQ
Sbjct: 68 MVTEIIDELKVLEKTVDAQMSFGGNGGKLQ 97

[Close]
BLAST of MELO3C035420.2 vs. TrEMBL
Match: tr|A0A2P6RTT8|A0A2P6RTT8_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0126401 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.9e-04
Identity = 23/30 (76.67%), Postives = 29/30 (96.67%), Query Frame = 0 

Query: 1   MVTKIINELKVLEKNVDAQMSFGGNGGKLQ 31
           +VTKI+ +LKVLEK++DAQMSFGG+GGKLQ
Sbjct: 74  LVTKIVQDLKVLEKDIDAQMSFGGSGGKLQ 103

[Close]
BLAST of MELO3C035420.2 vs. TrEMBL
Match: tr|A0A251PZV0|A0A251PZV0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G137200 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 3.8e-04
Identity = 23/30 (76.67%), Postives = 28/30 (93.33%), Query Frame = 0 

Query: 1   MVTKIINELKVLEKNVDAQMSFGGNGGKLQ 31
           MVTKI+ +LK LEK++DAQMSFGG+GGKLQ
Sbjct: 73  MVTKIVEDLKALEKDIDAQMSFGGSGGKLQ 102

[Close]
BLAST of MELO3C035420.2 vs. TrEMBL
Match: tr|A0A251PZZ4|A0A251PZZ4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G137200 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 3.8e-04
Identity = 23/30 (76.67%), Postives = 28/30 (93.33%), Query Frame = 0 

Query: 1   MVTKIINELKVLEKNVDAQMSFGGNGGKLQ 31
           MVTKI+ +LK LEK++DAQMSFGG+GGKLQ
Sbjct: 73  MVTKIVEDLKALEKDIDAQMSFGGSGGKLQ 102

The following BLAST results are available for this feature:
BLAST of MELO3C035420.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016900530.12.1e-1992.59PREDICTED: uncharacterized protein LOC103490622 [Cucumis melo][more]
XP_004139941.13.9e-0590.00PREDICTED: uncharacterized protein LOC101203963 [Cucumis sativus] >KGN46744.1 hy... [more]
XP_022947638.13.9e-0586.67uncharacterized protein LOC111451439 [Cucurbita moschata][more]
XP_022970715.13.9e-0586.67uncharacterized protein LOC111469615 [Cucurbita maxima] >XP_022970717.1 uncharac... [more]
XP_023532105.13.9e-0586.67uncharacterized protein LOC111794368 [Cucurbita pepo subsp. pepo][more]
BLAST of MELO3C035420.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G03687.15.3e-0458.62DTW domain-containing protein[more]
BLAST of MELO3C035420.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C035420.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4DXU3|A0A1S4DXU3_CUCME1.4e-1992.59uncharacterized protein LOC103490622 OS=Cucumis melo OX=3656 GN=LOC103490622 PE=... [more]
tr|A0A0A0KD21|A0A0A0KD21_CUCSA2.6e-0590.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G128540 PE=4 SV=1[more]
tr|A0A2P6RTT8|A0A2P6RTT8_ROSCH2.9e-0476.67Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0126401 PE=4... [more]
tr|A0A251PZV0|A0A251PZV0_PRUPE3.8e-0476.67Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G137200 PE=4 SV=1[more]
tr|A0A251PZZ4|A0A251PZZ4_PRUPE3.8e-0476.67Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G137200 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035420.2.1MELO3C035420.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C035420.2Cucumber (Gy14) v2cgybmedB009
MELO3C035420.2Cucurbita maxima (Rimu)cmamedB216
MELO3C035420.2Cucumber (Gy14) v1cgymedB528
MELO3C035420.2Cucurbita maxima (Rimu)cmamedB414
MELO3C035420.2Cucurbita pepo (Zucchini)cpemedB033
MELO3C035420.2Wild cucumber (PI 183967)cpimedB011
MELO3C035420.2Cucumber (Chinese Long) v2cumedB010
MELO3C035420.2Melon (DHL92) v3.6.1medmedB071
MELO3C035420.2Bottle gourd (USVL1VR-Ls)lsimedB192