MELO3C035391.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C035391.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	NAD-dependent protein deacylase
Location	chr12 : 9851526 .. 9851686 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGCAGAAGCAATCGAAAGTTTGGATGATGGAGTCCCAGGATCGGATAAGAGCTTTGGCATGAAGCAAAGGCCAGATGGTGATATTGAAACCGATGAAAAATATTGGGAGCATGATTTCTATATTCCAACCTGCCGAAAGTGCAACGGAGTGCTCAAATC

mRNA sequence

TGGGCAGAAGCAATCGAAAGTTTGGATGATGGAGTCCCAGGATCGGATAAGAGCTTTGGCATGAAGCAAAGGCCAGATGGTGATATTGAAACCGATGAAAAATATTGGGAGCATGATTTCTATATTCCAACCTGCCGAAAGTGCAACGGAGTGCTCAAATC

Coding sequence (CDS)

ATGAAGCAAAGGCCAGATGGTGATATTGAAACCGATGAAAAATATTGGGAGCATGATTTCTATATTCCAACCTGCCGAAAGTGCAACGGAGTGCTCAAA

Protein sequence

MKQRPDGDIETDEKYWEHDFYIPTCRKCNGVLK

Homology

[Close]

BLAST of MELO3C035391.2 vs. NCBI nr
Match: XP_008460860.1 (PREDICTED: NAD-dependent protein deacylase SRT2 isoform X1 [Cucumis melo] >XP_008460861.1 PREDICTED: NAD-dependent protein deacylase SRT2 isoform X1 [Cucumis melo] >XP_008460862.1 PREDICTED: NAD-dependent protein deacylase SRT2 isoform X1 [Cucumis melo])

HSP 1 Score: 74.3 bits (181), Expect = 8.5e-11
Identity = 30/33 (90.91%), Postives = 31/33 (93.94%), Query Frame = 0


Query: 1   MKQRPDGDIETDEKYWEHDFYIPTCRKCNGVLK 34
           MKQRPDGDIE DEKYWEHDF IPTC+KCNGVLK
Sbjct: 260 MKQRPDGDIEIDEKYWEHDFCIPTCQKCNGVLK 292

[Close]

BLAST of MELO3C035391.2 vs. NCBI nr
Match: XP_016902604.1 (PREDICTED: NAD-dependent protein deacylase SRT2 isoform X2 [Cucumis melo])

HSP 1 Score: 74.3 bits (181), Expect = 8.5e-11
Identity = 30/33 (90.91%), Postives = 31/33 (93.94%), Query Frame = 0


Query: 1   MKQRPDGDIETDEKYWEHDFYIPTCRKCNGVLK 34
           MKQRPDGDIE DEKYWEHDF IPTC+KCNGVLK
Sbjct: 236 MKQRPDGDIEIDEKYWEHDFCIPTCQKCNGVLK 268

[Close]

BLAST of MELO3C035391.2 vs. NCBI nr
Match: KGN62218.1 (hypothetical protein Csa_2G336650 [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 2.5e-10
Identity = 29/33 (87.88%), Postives = 31/33 (93.94%), Query Frame = 0


Query: 1   MKQRPDGDIETDEKYWEHDFYIPTCRKCNGVLK 34
           MKQRPDGDIE DEK+WEHDF IPTC+KCNGVLK
Sbjct: 260 MKQRPDGDIEIDEKFWEHDFCIPTCQKCNGVLK 292

[Close]

BLAST of MELO3C035391.2 vs. NCBI nr
Match: XP_011649435.1 (PREDICTED: LOW QUALITY PROTEIN: NAD-dependent protein deacetylase SRT2 [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 2.5e-10
Identity = 29/33 (87.88%), Postives = 31/33 (93.94%), Query Frame = 0


Query: 1   MKQRPDGDIETDEKYWEHDFYIPTCRKCNGVLK 34
           MKQRPDGDIE DEK+WEHDF IPTC+KCNGVLK
Sbjct: 145 MKQRPDGDIEIDEKFWEHDFCIPTCQKCNGVLK 177

[Close]

BLAST of MELO3C035391.2 vs. NCBI nr
Match: ESR45349.1 (hypothetical protein CICLE_v10001356mg [Citrus clementina])

HSP 1 Score: 71.2 bits (173), Expect = 7.2e-10
Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 0


Query: 1   MKQRPDGDIETDEKYWEHDFYIPTCRKCNGVLK 34
           MKQRPDGDIE DEK+WE DF+IPTC+KCNGVLK
Sbjct: 277 MKQRPDGDIEIDEKFWEEDFHIPTCQKCNGVLK 309

[Close]

BLAST of MELO3C035391.2 vs. TAIR10
Match: AT5G09230.7 (sirtuin 2)

HSP 1 Score: 63.9 bits (154), Expect = 2.1e-11
Identity = 25/33 (75.76%), Postives = 27/33 (81.82%), Query Frame = 0


Query: 1   MKQRPDGDIETDEKYWEHDFYIPTCRKCNGVLK 34
           MKQRPDGDIE DEK+WE  F+IP C KC GVLK
Sbjct: 250 MKQRPDGDIEIDEKFWEEGFHIPVCEKCKGVLK 282

[Close]

BLAST of MELO3C035391.2 vs. Swiss-Prot
Match: sp|Q94AQ6|SIR4_ARATH (NAD-dependent protein deacylase SRT2 OS=Arabidopsis thaliana OX=3702 GN=SRT2 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.8e-10
Identity = 25/33 (75.76%), Postives = 27/33 (81.82%), Query Frame = 0


Query: 1   MKQRPDGDIETDEKYWEHDFYIPTCRKCNGVLK 34
           MKQRPDGDIE DEK+WE  F+IP C KC GVLK
Sbjct: 247 MKQRPDGDIEIDEKFWEEGFHIPVCEKCKGVLK 279

[Close]

BLAST of MELO3C035391.2 vs. TrEMBL
Match: tr|A0A1S3CDW2|A0A1S3CDW2_CUCME (NAD-dependent protein deacylase OS=Cucumis melo OX=3656 GN=LOC103499610 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 5.6e-11
Identity = 30/33 (90.91%), Postives = 31/33 (93.94%), Query Frame = 0


Query: 1   MKQRPDGDIETDEKYWEHDFYIPTCRKCNGVLK 34
           MKQRPDGDIE DEKYWEHDF IPTC+KCNGVLK
Sbjct: 260 MKQRPDGDIEIDEKYWEHDFCIPTCQKCNGVLK 292

[Close]

BLAST of MELO3C035391.2 vs. TrEMBL
Match: tr|A0A1S4E2Z3|A0A1S4E2Z3_CUCME (NAD-dependent protein deacylase OS=Cucumis melo OX=3656 GN=LOC103499610 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 5.6e-11
Identity = 30/33 (90.91%), Postives = 31/33 (93.94%), Query Frame = 0


Query: 1   MKQRPDGDIETDEKYWEHDFYIPTCRKCNGVLK 34
           MKQRPDGDIE DEKYWEHDF IPTC+KCNGVLK
Sbjct: 236 MKQRPDGDIEIDEKYWEHDFCIPTCQKCNGVLK 268

[Close]

BLAST of MELO3C035391.2 vs. TrEMBL
Match: tr|A0A0A0LK90|A0A0A0LK90_CUCSA (NAD-dependent protein deacylase OS=Cucumis sativus OX=3659 GN=Csa_2G336650 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.6e-10
Identity = 29/33 (87.88%), Postives = 31/33 (93.94%), Query Frame = 0


Query: 1   MKQRPDGDIETDEKYWEHDFYIPTCRKCNGVLK 34
           MKQRPDGDIE DEK+WEHDF IPTC+KCNGVLK
Sbjct: 260 MKQRPDGDIEIDEKFWEHDFCIPTCQKCNGVLK 292

[Close]

BLAST of MELO3C035391.2 vs. TrEMBL
Match: tr|A0A2H5P744|A0A2H5P744_CITUN (NAD-dependent protein deacylase OS=Citrus unshiu OX=55188 GN=CUMW_109820 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 4.8e-10
Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 0


Query: 1   MKQRPDGDIETDEKYWEHDFYIPTCRKCNGVLK 34
           MKQRPDGDIE DEK+WE DF+IPTC+KCNGVLK
Sbjct: 261 MKQRPDGDIEIDEKFWEEDFHIPTCQKCNGVLK 293

[Close]

BLAST of MELO3C035391.2 vs. TrEMBL
Match: tr|V4SX23|V4SX23_9ROSI (NAD-dependent protein deacylase OS=Citrus clementina OX=85681 GN=CICLE_v10001356mg PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 4.8e-10
Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 0


Query: 1   MKQRPDGDIETDEKYWEHDFYIPTCRKCNGVLK 34
           MKQRPDGDIE DEK+WE DF+IPTC+KCNGVLK
Sbjct: 270 MKQRPDGDIEIDEKFWEEDFHIPTCQKCNGVLK 302

The following BLAST results are available for this feature:

BLAST of MELO3C035391.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460860.1	8.5e-11	90.91	PREDICTED: NAD-dependent protein deacylase SRT2 isoform X1 [Cucumis melo] >XP_00...	[more]
XP_016902604.1	8.5e-11	90.91	PREDICTED: NAD-dependent protein deacylase SRT2 isoform X2 [Cucumis melo]	[more]
KGN62218.1	2.5e-10	87.88	hypothetical protein Csa_2G336650 [Cucumis sativus]	[more]
XP_011649435.1	2.5e-10	87.88	PREDICTED: LOW QUALITY PROTEIN: NAD-dependent protein deacetylase SRT2 [Cucumis ...	[more]
ESR45349.1	7.2e-10	84.85	hypothetical protein CICLE_v10001356mg [Citrus clementina]	[more]

BLAST of MELO3C035391.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G09230.7	2.1e-11	75.76	sirtuin 2	[more]

BLAST of MELO3C035391.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94AQ6\|SIR4_ARATH	3.8e-10	75.76	NAD-dependent protein deacylase SRT2 OS=Arabidopsis thaliana OX=3702 GN=SRT2 PE=...	[more]

BLAST of MELO3C035391.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CDW2\|A0A1S3CDW2_CUCME	5.6e-11	90.91	NAD-dependent protein deacylase OS=Cucumis melo OX=3656 GN=LOC103499610 PE=3 SV=...	[more]
tr\|A0A1S4E2Z3\|A0A1S4E2Z3_CUCME	5.6e-11	90.91	NAD-dependent protein deacylase OS=Cucumis melo OX=3656 GN=LOC103499610 PE=3 SV=...	[more]
tr\|A0A0A0LK90\|A0A0A0LK90_CUCSA	1.6e-10	87.88	NAD-dependent protein deacylase OS=Cucumis sativus OX=3659 GN=Csa_2G336650 PE=3 ...	[more]
tr\|A0A2H5P744\|A0A2H5P744_CITUN	4.8e-10	84.85	NAD-dependent protein deacylase OS=Citrus unshiu OX=55188 GN=CUMW_109820 PE=3 SV...	[more]
tr\|V4SX23\|V4SX23_9ROSI	4.8e-10	84.85	NAD-dependent protein deacylase OS=Citrus clementina OX=85681 GN=CICLE_v10001356...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006471	protein ADP-ribosylation
biological_process	GO:0006476	protein deacetylation
cellular_component	GO:0005759	mitochondrial matrix
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0070403	NAD+ binding
molecular_function	GO:0034979	NAD-dependent protein deacetylase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035391.2.1	MELO3C035391.2.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C035391.2	Cucumber (Gy14) v2	cgybmedB009
MELO3C035391.2	Cucumber (Gy14) v1	cgymedB361
MELO3C035391.2	Cucurbita maxima (Rimu)	cmamedB161
MELO3C035391.2	Cucurbita maxima (Rimu)	cmamedB215
MELO3C035391.2	Cucurbita moschata (Rifu)	cmomedB151
MELO3C035391.2	Cucurbita moschata (Rifu)	cmomedB203
MELO3C035391.2	Cucurbita pepo (Zucchini)	cpemedB563
MELO3C035391.2	Cucurbita pepo (Zucchini)	cpemedB881
MELO3C035391.2	Wild cucumber (PI 183967)	cpimedB011
MELO3C035391.2	Cucumber (Chinese Long) v2	cumedB010
MELO3C035391.2	Bottle gourd (USVL1VR-Ls)	lsimedB255
MELO3C035391.2	Watermelon (Charleston Gray)	medwcgB133
MELO3C035391.2	Watermelon (97103) v1	medwmB157
MELO3C035391.2	Silver-seed gourd	carmedB0174
MELO3C035391.2	Cucumber (Chinese Long) v3	cucmedB009
MELO3C035391.2	Watermelon (97103) v2	medwmbB132
MELO3C035391.2	Wax gourd	medwgoB176