MELO3C035388.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C035388.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Envelope-like protein
Location	chr12 : 9389548 .. 9390186 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAACACTCGTAAGGGAAATTATGCGACTAAATCATCTGAAAAAGTTCATGAAGCTCTAGTTTCACAGTCAATCATGCATGGTGTGAGAATGAGAGGTCGTCATTTCACAAGTACTTCGCCGTAGAGACCCTATTGACTTTCGTCAGAAAAATTTCAGGCACATGTCTCTAAAAGCTCTCATATCCTGTACAAGAAGAAATTGGTATTGGAAGTGCTGCGAAAGATGCTGAAAATGCTCCTAGTGCCTATGAGACTCATATTTCAGAAATGGATTTCGATGACCTAGATAATGTTCCACTGGCTAGACTGTTGAAGAAGAGTTCTGTTTTTTATGTTACGACTAAAAAATCTAATGATCCTATTTTATCAGTTCATTCTCAAGAAAGCTCTTCTTCTAAAGGTGTGTTTGTTCTTACTCCTGGCCTTCATTACGCTTCCAATGTAGAACCTGGCCCATCACATCACTCTTCACCAGTTAGGTCATCTATTCTAGACAATGTTACTACATCTAATCCACACTTTAACCCTGCACCTGCTCTTGCTGATAAATCTATTGCGACTGAAGGAAGGACTAGCGTCCCACGCTGATGAGTCTCTTGTTAATGAAAATGTTGAATTAAATGTTCATAATGAT

mRNA sequence

ATGGTGAACACTCGTAAGGGAAATTATGCGACTAAATCATCTGAAAAAGTTCATGAAGCTCTAGTTTCACAGTCAATCATGCATGGTGTGAGAATGAGAGGTCGTCATTTCACAAGTACTTCGCCGTAGAGACCCTATTGACTTTCGTCAGAAAAATTTCAGGCACATGTCTCTAAAAGCTCTCATATCCTGTACAAGAAGAAATTGGTATTGGAAGTGCTGCGAAAGATGCTGAAAATGCTCCTAGTGCCTATGAGACTCATATTTCAGAAATGGATTTCGATGACCTAGATAATGTTCCACTGGCTAGACTGTTGAAGAAGAGTTCTGTTTTTTATGTTACGACTAAAAAATCTAATGATCCTATTTTATCAGTTCATTCTCAAGAAAGCTCTTCTTCTAAAGGTGTGTTTGTTCTTACTCCTGGCCTTCATTACGCTTCCAATGTAGAACCTGGCCCATCACATCACTCTTCACCAGTTAGGTCATCTATTCTAGACAATGTTACTACATCTAATCCACACTTTAACCCTGCACCTGCTCTTGCTGATAAATCTATTGCGACTGAAGGAAGGACTAGCGTCCCACGCTGATGAGTCTCTTGTTAATGAAAATGTTGAATTAAATGTTCATAATGAT

Coding sequence (CDS)

ATGGATTTCGATGACCTAGATAATGTTCCACTGGCTAGACTGTTGAAGAAGAGTTCTGTTTTTTATGTTACGACTAAAAAATCTAATGATCCTATTTTATCAGTTCATTCTCAAGAAAGCTCTTCTTCTAAAGGTGTGTTTGTTCTTACTCCTGGCCTTCATTACGCTTCCAATGTAGAACCTGGCCCATCACATCACTCTTCACCAGTTAGGTCATCTATTCTAGACAATGTTACTACATCTAATCCACACTTTAACCCTGCACCTGCTCTTGCTGATAAATCTATTGCGACTGAAGGAAGGACTAGCGTCCCACGCTGA

Protein sequence

MDFDDLDNVPLARLLKKSSVFYVTTKKSNDPILSVHSQESSSSKGVFVLTPGLHYASNVEPGPSHHSSPVRSSILDNVTTSNPHFNPAPALADKSIATEGRTSVPR

Homology

[Close]

BLAST of MELO3C035388.2 vs. NCBI nr
Match: ADN33761.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-19
Identity = 62/104 (59.62%), Postives = 75/104 (72.12%), Query Frame = 0


Query: 1   MDFDDLDNVPLARLLKKSSVFYVTTKKSNDPILSVHSQESSSSKGVFVLTPGLHYASNVE 60
           MD +DLD+V LARLLKK+ V  V    S DP +S HSQESSS++GVFV TPG+ + SN +
Sbjct: 67  MDSNDLDDVRLARLLKKTYVPNVAAGNSIDPSVSSHSQESSSTEGVFVPTPGVQHTSNFK 126

Query: 61  PGPSHHSSPVRSSILDNVTTSNPHFNPAPALADKSIATEGRTSV 105
            GPS +SSPVRSS+ D  TTS  + N APA AD+S  TEGRT V
Sbjct: 127 LGPSLYSSPVRSSVPD-TTTSGLNNNSAPAPADESATTEGRTDV 169

[Close]

BLAST of MELO3C035388.2 vs. NCBI nr
Match: XP_008461533.1 (PREDICTED: uncharacterized protein LOC103500104 [Cucumis melo])

HSP 1 Score: 103.6 bits (257), Expect = 4.2e-19
Identity = 52/86 (60.47%), Postives = 67/86 (77.91%), Query Frame = 0


Query: 2   DFDDLDNVPLARLLKKSSVFYVTTKKSNDPILSVHSQESSSSKGVFVLTPGLHYASNVEP 61
           +FDDLD+VPLARLLKK +   V  +KS D +LSVHSQESS S+GVFV TPGL   S++EP
Sbjct: 58  NFDDLDDVPLARLLKKVAAPDVFLEKSVDLVLSVHSQESSPSEGVFVPTPGLRQTSSIEP 117

Query: 62  GPSHHSSPVRSSILDNVTTSNPHFNP 88
           GPSH+S P++  ILDN+ +++PH  P
Sbjct: 118 GPSHYSPPIQWPILDNIASTDPHAAP 143

[Close]

BLAST of MELO3C035388.2 vs. NCBI nr
Match: XP_008466805.1 (PREDICTED: uncharacterized protein LOC103504128 [Cucumis melo])

HSP 1 Score: 96.7 bits (239), Expect = 5.1e-17
Identity = 53/104 (50.96%), Postives = 66/104 (63.46%), Query Frame = 0


Query: 1   MDFDDLDNVPLARLLKKSSVFYVTTKKSNDPILSVHSQESSSSKGVFVLTPGLHYASNVE 60
           MDFDDLD++PLA                      +HSQ SSSSKGVF+ TPG H+ S +E
Sbjct: 58  MDFDDLDDIPLA----------------------LHSQGSSSSKGVFIPTPGFHHTSVIE 117

Query: 61  PGPSHHSSPVRSSILDNVTTSNPHFNPAPALADKSIATEGRTSV 105
           P PSH+SSP+RSSI D  TT++ H + A A  D+S+ATEGRT V
Sbjct: 118 PIPSHYSSPIRSSIPDKTTTTDSHVDLARASVDESVATEGRTDV 139

[Close]

BLAST of MELO3C035388.2 vs. NCBI nr
Match: XP_008442287.1 (PREDICTED: uncharacterized protein LOC103486195 [Cucumis melo])

HSP 1 Score: 95.9 bits (237), Expect = 8.8e-17
Identity = 48/74 (64.86%), Postives = 56/74 (75.68%), Query Frame = 0


Query: 1   MDFDDLDNVPLARLLKKSSVFYVTTKKSNDPILSVHSQESSSSKGVFVLTPGLHYASNVE 60
           MD DDLD++PLARLLKKS    V   K  DPI+S HSQ+SSSS+ VFV TPGLH+ASNVE
Sbjct: 58  MDLDDLDDIPLARLLKKSYASEVALAKPTDPIISAHSQKSSSSEDVFVPTPGLHHASNVE 117

Query: 61  PGPSHHSSPVRSSI 75
           PGPS HS   R+ +
Sbjct: 118 PGPSQHSPSGRTRV 131

[Close]

BLAST of MELO3C035388.2 vs. NCBI nr
Match: XP_008450465.1 (PREDICTED: uncharacterized protein LOC103492059 [Cucumis melo])

HSP 1 Score: 90.1 bits (222), Expect = 4.8e-15
Identity = 54/104 (51.92%), Postives = 60/104 (57.69%), Query Frame = 0


Query: 1   MDFDDLDNVPLARLLKKSSVFYVTTKKSNDPILSVHSQESSSSKGVFVLTPGLHYASNVE 60
           MD D  DNVPL RLLKK     V   KS DP +S  SQESSS + VFV TP LH+ASN E
Sbjct: 1   MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE 60

Query: 61  PGPSHHSSPVRSSILDNVTTSNPHFNPAPALADKSIATEGRTSV 105
           PGPS HS   RSSI ++         PA    D+ I  E RT V
Sbjct: 61  PGPSQHSYSDRSSISNDXXXXXXXSKPASLPIDEFITIEERTDV 104

[Close]

BLAST of MELO3C035388.2 vs. TrEMBL
Match: tr|E5GBC0|E5GBC0_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.6e-20
Identity = 62/104 (59.62%), Postives = 75/104 (72.12%), Query Frame = 0


Query: 1   MDFDDLDNVPLARLLKKSSVFYVTTKKSNDPILSVHSQESSSSKGVFVLTPGLHYASNVE 60
           MD +DLD+V LARLLKK+ V  V    S DP +S HSQESSS++GVFV TPG+ + SN +
Sbjct: 67  MDSNDLDDVRLARLLKKTYVPNVAAGNSIDPSVSSHSQESSSTEGVFVPTPGVQHTSNFK 126

Query: 61  PGPSHHSSPVRSSILDNVTTSNPHFNPAPALADKSIATEGRTSV 105
            GPS +SSPVRSS+ D  TTS  + N APA AD+S  TEGRT V
Sbjct: 127 LGPSLYSSPVRSSVPD-TTTSGLNNNSAPAPADESATTEGRTDV 169

[Close]

BLAST of MELO3C035388.2 vs. TrEMBL
Match: tr|A0A1S3CG84|A0A1S3CG84_CUCME (uncharacterized protein LOC103500104 OS=Cucumis melo OX=3656 GN=LOC103500104 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.8e-19
Identity = 52/86 (60.47%), Postives = 67/86 (77.91%), Query Frame = 0


Query: 2   DFDDLDNVPLARLLKKSSVFYVTTKKSNDPILSVHSQESSSSKGVFVLTPGLHYASNVEP 61
           +FDDLD+VPLARLLKK +   V  +KS D +LSVHSQESS S+GVFV TPGL   S++EP
Sbjct: 58  NFDDLDDVPLARLLKKVAAPDVFLEKSVDLVLSVHSQESSPSEGVFVPTPGLRQTSSIEP 117

Query: 62  GPSHHSSPVRSSILDNVTTSNPHFNP 88
           GPSH+S P++  ILDN+ +++PH  P
Sbjct: 118 GPSHYSPPIQWPILDNIASTDPHAAP 143

[Close]

BLAST of MELO3C035388.2 vs. TrEMBL
Match: tr|A0A1S3CS40|A0A1S3CS40_CUCME (uncharacterized protein LOC103504128 OS=Cucumis melo OX=3656 GN=LOC103504128 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.4e-17
Identity = 53/104 (50.96%), Postives = 66/104 (63.46%), Query Frame = 0


Query: 1   MDFDDLDNVPLARLLKKSSVFYVTTKKSNDPILSVHSQESSSSKGVFVLTPGLHYASNVE 60
           MDFDDLD++PLA                      +HSQ SSSSKGVF+ TPG H+ S +E
Sbjct: 58  MDFDDLDDIPLA----------------------LHSQGSSSSKGVFIPTPGFHHTSVIE 117

Query: 61  PGPSHHSSPVRSSILDNVTTSNPHFNPAPALADKSIATEGRTSV 105
           P PSH+SSP+RSSI D  TT++ H + A A  D+S+ATEGRT V
Sbjct: 118 PIPSHYSSPIRSSIPDKTTTTDSHVDLARASVDESVATEGRTDV 139

[Close]

BLAST of MELO3C035388.2 vs. TrEMBL
Match: tr|A0A1S3B4V9|A0A1S3B4V9_CUCME (uncharacterized protein LOC103486195 OS=Cucumis melo OX=3656 GN=LOC103486195 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.8e-17
Identity = 48/74 (64.86%), Postives = 56/74 (75.68%), Query Frame = 0


Query: 1   MDFDDLDNVPLARLLKKSSVFYVTTKKSNDPILSVHSQESSSSKGVFVLTPGLHYASNVE 60
           MD DDLD++PLARLLKKS    V   K  DPI+S HSQ+SSSS+ VFV TPGLH+ASNVE
Sbjct: 58  MDLDDLDDIPLARLLKKSYASEVALAKPTDPIISAHSQKSSSSEDVFVPTPGLHHASNVE 117

Query: 61  PGPSHHSSPVRSSI 75
           PGPS HS   R+ +
Sbjct: 118 PGPSQHSPSGRTRV 131

[Close]

BLAST of MELO3C035388.2 vs. TrEMBL
Match: tr|A0A1S3BQA7|A0A1S3BQA7_CUCME (uncharacterized protein LOC103492059 OS=Cucumis melo OX=3656 GN=LOC103492059 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.2e-15
Identity = 54/104 (51.92%), Postives = 60/104 (57.69%), Query Frame = 0


Query: 1   MDFDDLDNVPLARLLKKSSVFYVTTKKSNDPILSVHSQESSSSKGVFVLTPGLHYASNVE 60
           MD D  DNVPL RLLKK     V   KS DP +S  SQESSS + VFV TP LH+ASN E
Sbjct: 1   MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE 60

Query: 61  PGPSHHSSPVRSSILDNVTTSNPHFNPAPALADKSIATEGRTSV 105
           PGPS HS   RSSI ++         PA    D+ I  E RT V
Sbjct: 61  PGPSQHSYSDRSSISNDXXXXXXXSKPASLPIDEFITIEERTDV 104

The following BLAST results are available for this feature:

BLAST of MELO3C035388.2 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN33761.1	1.4e-19	59.62	hypothetical protein [Cucumis melo subsp. melo]	[more]
XP_008461533.1	4.2e-19	60.47	PREDICTED: uncharacterized protein LOC103500104 [Cucumis melo]	[more]
XP_008466805.1	5.1e-17	50.96	PREDICTED: uncharacterized protein LOC103504128 [Cucumis melo]	[more]
XP_008442287.1	8.8e-17	64.86	PREDICTED: uncharacterized protein LOC103486195 [Cucumis melo]	[more]
XP_008450465.1	4.8e-15	51.92	PREDICTED: uncharacterized protein LOC103492059 [Cucumis melo]	[more]

BLAST of MELO3C035388.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C035388.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C035388.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|E5GBC0\|E5GBC0_CUCME	9.6e-20	59.62	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S3CG84\|A0A1S3CG84_CUCME	2.8e-19	60.47	uncharacterized protein LOC103500104 OS=Cucumis melo OX=3656 GN=LOC103500104 PE=...	[more]
tr\|A0A1S3CS40\|A0A1S3CS40_CUCME	3.4e-17	50.96	uncharacterized protein LOC103504128 OS=Cucumis melo OX=3656 GN=LOC103504128 PE=...	[more]
tr\|A0A1S3B4V9\|A0A1S3B4V9_CUCME	5.8e-17	64.86	uncharacterized protein LOC103486195 OS=Cucumis melo OX=3656 GN=LOC103486195 PE=...	[more]
tr\|A0A1S3BQA7\|A0A1S3BQA7_CUCME	3.2e-15	51.92	uncharacterized protein LOC103492059 OS=Cucumis melo OX=3656 GN=LOC103492059 PE=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035388.2.1	MELO3C035388.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..86

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C035388.2	Cucumber (Gy14) v2	cgybmedB009
MELO3C035388.2	Cucumber (Gy14) v1	cgymedB361
MELO3C035388.2	Cucurbita maxima (Rimu)	cmamedB161
MELO3C035388.2	Cucurbita maxima (Rimu)	cmamedB215
MELO3C035388.2	Cucurbita moschata (Rifu)	cmomedB151
MELO3C035388.2	Cucurbita moschata (Rifu)	cmomedB203
MELO3C035388.2	Cucurbita pepo (Zucchini)	cpemedB563
MELO3C035388.2	Cucurbita pepo (Zucchini)	cpemedB881
MELO3C035388.2	Wild cucumber (PI 183967)	cpimedB011
MELO3C035388.2	Cucumber (Chinese Long) v2	cumedB010
MELO3C035388.2	Bottle gourd (USVL1VR-Ls)	lsimedB255
MELO3C035388.2	Watermelon (Charleston Gray)	medwcgB133
MELO3C035388.2	Watermelon (97103) v1	medwmB165
MELO3C035388.2	Silver-seed gourd	carmedB0174
MELO3C035388.2	Cucumber (Chinese Long) v3	cucmedB009
MELO3C035388.2	Watermelon (97103) v2	medwmbB132
MELO3C035388.2	Wax gourd	medwgoB176