MELO3C035364.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C035364.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionMyosin heavy chain-like protein, putative
Locationchr12 : 7951227 .. 7951453 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGTGCCTAAAGGTTGGGATAAGCTATTTGTATGTGTAAGTTTTAAGCAAACTAGGAAGACAATTGTCAAGTCAAGCAAAGCATCGGTTCGTAATGGAAGTTTCCAGTGGACTGAGACTTTATCAGATTCCATTTGGGTTTCACAAGATGAAGTTTCAAAGGAGTTTGAGGATTGTAATTTCAAGCTTGTTGTGGCCATGGTATTGTTGTTTGAGCTTTATGAGTAA

mRNA sequence

AGGTGCCTAAAGGTTGGGATAAGCTATTTGTATGTGTAAGTTTTAAGCAAACTAGGAAGACAATTGTCAAGTCAAGCAAAGCATCGGTTCGTAATGGAAGTTTCCAGTGGACTGAGACTTTATCAGATTCCATTTGGGTTTCACAAGATGAAGTTTCAAAGGAGTTTGAGGATTGTAATTTCAAGCTTGTTGTGGCCATGGTATTGTTGTTTGAGCTTTATGAGTAA

Coding sequence (CDS)

GTGCCTAAAGGTTGGGATAAGCTATTTGTATGTGTAAGTTTTAAGCAAACTAGGAAGACAATTGTCAAGTCAAGCAAAGCATCGGTTCGTAATGGAAGTTTCCAGTGGACTGAGACTTTATCAGATTCCATTTGGGTTTCACAAGATGAAGTTTCAAAGGAGTTTGAGGATTGTAATTTCAAGCTTGTTGTGGCCATGGTATTGTTGTTTGAGCTTTATGAGTAA

Protein sequence

VPKGWDKLFVCVSFKQTRKTIVKSSKASVRNGSFQWTETLSDSIWVSQDEVSKEFEDCNFKLVVAMVLLFELYE
Homology
[Close]
BLAST of MELO3C035364.2 vs. NCBI nr
Match: XP_008442754.1 (PREDICTED: sporulation-specific protein 15-like isoform X1 [Cucumis melo])

HSP 1 Score: 117.5 bits (293), Expect = 2.0e-23
Identity = 57/66 (86.36%), Postives = 61/66 (92.42%), Query Frame = 0 

Query: 1  VPKGWDKLFVCVSFKQTRKTIVKSSKASVRNGSFQWTETLSDSIWVSQDEVSKEFEDCNF 60
          VPKGWDKLFV V  +QT KTI++SSKASVRNGS QWTE+LSDSIWVSQDEVSKEFEDCNF
Sbjct: 28 VPKGWDKLFVSVISEQTGKTIIRSSKASVRNGSCQWTESLSDSIWVSQDEVSKEFEDCNF 87

Query: 61 KLVVAM 67
          KLVVAM
Sbjct: 88 KLVVAM 93

[Close]
BLAST of MELO3C035364.2 vs. NCBI nr
Match: XP_008442755.1 (PREDICTED: sporulation-specific protein 15-like isoform X2 [Cucumis melo])

HSP 1 Score: 117.5 bits (293), Expect = 2.0e-23
Identity = 57/66 (86.36%), Postives = 61/66 (92.42%), Query Frame = 0 

Query: 1  VPKGWDKLFVCVSFKQTRKTIVKSSKASVRNGSFQWTETLSDSIWVSQDEVSKEFEDCNF 60
          VPKGWDKLFV V  +QT KTI++SSKASVRNGS QWTE+LSDSIWVSQDEVSKEFEDCNF
Sbjct: 28 VPKGWDKLFVSVISEQTGKTIIRSSKASVRNGSCQWTESLSDSIWVSQDEVSKEFEDCNF 87

Query: 61 KLVVAM 67
          KLVVAM
Sbjct: 88 KLVVAM 93

[Close]
BLAST of MELO3C035364.2 vs. NCBI nr
Match: XP_008442756.1 (PREDICTED: sporulation-specific protein 15-like isoform X3 [Cucumis melo])

HSP 1 Score: 117.5 bits (293), Expect = 2.0e-23
Identity = 57/66 (86.36%), Postives = 61/66 (92.42%), Query Frame = 0 

Query: 1  VPKGWDKLFVCVSFKQTRKTIVKSSKASVRNGSFQWTETLSDSIWVSQDEVSKEFEDCNF 60
          VPKGWDKLFV V  +QT KTI++SSKASVRNGS QWTE+LSDSIWVSQDEVSKEFEDCNF
Sbjct: 28 VPKGWDKLFVSVISEQTGKTIIRSSKASVRNGSCQWTESLSDSIWVSQDEVSKEFEDCNF 87

Query: 61 KLVVAM 67
          KLVVAM
Sbjct: 88 KLVVAM 93

[Close]
BLAST of MELO3C035364.2 vs. NCBI nr
Match: XP_008442757.1 (PREDICTED: sporulation-specific protein 15-like isoform X4 [Cucumis melo])

HSP 1 Score: 117.5 bits (293), Expect = 2.0e-23
Identity = 57/66 (86.36%), Postives = 61/66 (92.42%), Query Frame = 0 

Query: 1  VPKGWDKLFVCVSFKQTRKTIVKSSKASVRNGSFQWTETLSDSIWVSQDEVSKEFEDCNF 60
          VPKGWDKLFV V  +QT KTI++SSKASVRNGS QWTE+LSDSIWVSQDEVSKEFEDCNF
Sbjct: 28 VPKGWDKLFVSVISEQTGKTIIRSSKASVRNGSCQWTESLSDSIWVSQDEVSKEFEDCNF 87

Query: 61 KLVVAM 67
          KLVVAM
Sbjct: 88 KLVVAM 93

[Close]
BLAST of MELO3C035364.2 vs. NCBI nr
Match: KGN59033.1 (hypothetical protein Csa_3G747640 [Cucumis sativus])

HSP 1 Score: 114.0 bits (284), Expect = 2.2e-22
Identity = 56/66 (84.85%), Postives = 59/66 (89.39%), Query Frame = 0 

Query: 1  VPKGWDKLFVCVSFKQTRKTIVKSSKASVRNGSFQWTETLSDSIWVSQDEVSKEFEDCNF 60
          VPKGWDKLFV V  +QT K IV+SSKA VRNGS QWTE+LSDSIWVSQDEVSKEFEDCNF
Sbjct: 28 VPKGWDKLFVSVISEQTGKAIVRSSKAPVRNGSCQWTESLSDSIWVSQDEVSKEFEDCNF 87

Query: 61 KLVVAM 67
          KLVVAM
Sbjct: 88 KLVVAM 93

[Close]
BLAST of MELO3C035364.2 vs. TAIR10
Match: AT1G22060.1 (LOCATED IN: vacuole)

HSP 1 Score: 51.2 bits (121), Expect = 3.1e-07
Identity = 24/63 (38.10%), Postives = 41/63 (65.08%), Query Frame = 0 

Query: 4  GWDKLFVCVSFKQTRKTIVKSSKASVRNGSFQWTETLSDSIWVSQDEVSKEFEDCNFKLV 63
          GWDKLF+      + K   K++KA VRNG+ +W + + ++  + QD  +K+F++  +K+V
Sbjct: 31 GWDKLFISFIPADSVKATAKTTKALVRNGTCKWGDPIYETTRLLQDTRTKQFDEKLYKIV 90

Query: 64 VAM 67
          VAM
Sbjct: 91 VAM 93

[Close]
BLAST of MELO3C035364.2 vs. TrEMBL
Match: tr|A0A1S3B5Z1|A0A1S3B5Z1_CUCME (sporulation-specific protein 15-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103486536 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-23
Identity = 57/66 (86.36%), Postives = 61/66 (92.42%), Query Frame = 0 

Query: 1  VPKGWDKLFVCVSFKQTRKTIVKSSKASVRNGSFQWTETLSDSIWVSQDEVSKEFEDCNF 60
          VPKGWDKLFV V  +QT KTI++SSKASVRNGS QWTE+LSDSIWVSQDEVSKEFEDCNF
Sbjct: 28 VPKGWDKLFVSVISEQTGKTIIRSSKASVRNGSCQWTESLSDSIWVSQDEVSKEFEDCNF 87

Query: 61 KLVVAM 67
          KLVVAM
Sbjct: 88 KLVVAM 93

[Close]
BLAST of MELO3C035364.2 vs. TrEMBL
Match: tr|A0A1S3B6G6|A0A1S3B6G6_CUCME (sporulation-specific protein 15-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486536 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-23
Identity = 57/66 (86.36%), Postives = 61/66 (92.42%), Query Frame = 0 

Query: 1  VPKGWDKLFVCVSFKQTRKTIVKSSKASVRNGSFQWTETLSDSIWVSQDEVSKEFEDCNF 60
          VPKGWDKLFV V  +QT KTI++SSKASVRNGS QWTE+LSDSIWVSQDEVSKEFEDCNF
Sbjct: 28 VPKGWDKLFVSVISEQTGKTIIRSSKASVRNGSCQWTESLSDSIWVSQDEVSKEFEDCNF 87

Query: 61 KLVVAM 67
          KLVVAM
Sbjct: 88 KLVVAM 93

[Close]
BLAST of MELO3C035364.2 vs. TrEMBL
Match: tr|A0A1S3B778|A0A1S3B778_CUCME (sporulation-specific protein 15-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103486536 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-23
Identity = 57/66 (86.36%), Postives = 61/66 (92.42%), Query Frame = 0 

Query: 1  VPKGWDKLFVCVSFKQTRKTIVKSSKASVRNGSFQWTETLSDSIWVSQDEVSKEFEDCNF 60
          VPKGWDKLFV V  +QT KTI++SSKASVRNGS QWTE+LSDSIWVSQDEVSKEFEDCNF
Sbjct: 28 VPKGWDKLFVSVISEQTGKTIIRSSKASVRNGSCQWTESLSDSIWVSQDEVSKEFEDCNF 87

Query: 61 KLVVAM 67
          KLVVAM
Sbjct: 88 KLVVAM 93

[Close]
BLAST of MELO3C035364.2 vs. TrEMBL
Match: tr|A0A1S3B751|A0A1S3B751_CUCME (sporulation-specific protein 15-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486536 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-23
Identity = 57/66 (86.36%), Postives = 61/66 (92.42%), Query Frame = 0 

Query: 1  VPKGWDKLFVCVSFKQTRKTIVKSSKASVRNGSFQWTETLSDSIWVSQDEVSKEFEDCNF 60
          VPKGWDKLFV V  +QT KTI++SSKASVRNGS QWTE+LSDSIWVSQDEVSKEFEDCNF
Sbjct: 28 VPKGWDKLFVSVISEQTGKTIIRSSKASVRNGSCQWTESLSDSIWVSQDEVSKEFEDCNF 87

Query: 61 KLVVAM 67
          KLVVAM
Sbjct: 88 KLVVAM 93

[Close]
BLAST of MELO3C035364.2 vs. TrEMBL
Match: tr|A0A0A0LB79|A0A0A0LB79_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G747640 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-22
Identity = 56/66 (84.85%), Postives = 59/66 (89.39%), Query Frame = 0 

Query: 1  VPKGWDKLFVCVSFKQTRKTIVKSSKASVRNGSFQWTETLSDSIWVSQDEVSKEFEDCNF 60
          VPKGWDKLFV V  +QT K IV+SSKA VRNGS QWTE+LSDSIWVSQDEVSKEFEDCNF
Sbjct: 28 VPKGWDKLFVSVISEQTGKAIVRSSKAPVRNGSCQWTESLSDSIWVSQDEVSKEFEDCNF 87

Query: 61 KLVVAM 67
          KLVVAM
Sbjct: 88 KLVVAM 93

The following BLAST results are available for this feature:
BLAST of MELO3C035364.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008442754.12.0e-2386.36PREDICTED: sporulation-specific protein 15-like isoform X1 [Cucumis melo][more]
XP_008442755.12.0e-2386.36PREDICTED: sporulation-specific protein 15-like isoform X2 [Cucumis melo][more]
XP_008442756.12.0e-2386.36PREDICTED: sporulation-specific protein 15-like isoform X3 [Cucumis melo][more]
XP_008442757.12.0e-2386.36PREDICTED: sporulation-specific protein 15-like isoform X4 [Cucumis melo][more]
KGN59033.12.2e-2284.85hypothetical protein Csa_3G747640 [Cucumis sativus][more]
BLAST of MELO3C035364.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G22060.13.1e-0738.10LOCATED IN: vacuole[more]
BLAST of MELO3C035364.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C035364.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B5Z1|A0A1S3B5Z1_CUCME1.3e-2386.36sporulation-specific protein 15-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3B6G6|A0A1S3B6G6_CUCME1.3e-2386.36sporulation-specific protein 15-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3B778|A0A1S3B778_CUCME1.3e-2386.36sporulation-specific protein 15-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3B751|A0A1S3B751_CUCME1.3e-2386.36sporulation-specific protein 15-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0LB79|A0A0A0LB79_CUCSA1.4e-2284.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G747640 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019448NT-C2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035364.2.1MELO3C035364.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13140MYOSINcoord: 1..66
NoneNo IPR availablePANTHERPTHR13140:SF670SUBFAMILY NOT NAMEDcoord: 1..66
IPR019448NT-type C2 domainPROSITEPS51840C2_NTcoord: 1..74
score: 13.789

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C035364.2Cucumber (Gy14) v2cgybmedB009
MELO3C035364.2Cucumber (Gy14) v1cgymedB361
MELO3C035364.2Cucurbita maxima (Rimu)cmamedB161
MELO3C035364.2Cucurbita maxima (Rimu)cmamedB215
MELO3C035364.2Cucurbita moschata (Rifu)cmomedB203
MELO3C035364.2Cucurbita pepo (Zucchini)cpemedB563
MELO3C035364.2Cucurbita pepo (Zucchini)cpemedB880
MELO3C035364.2Wild cucumber (PI 183967)cpimedB011
MELO3C035364.2Cucumber (Chinese Long) v2cumedB010
MELO3C035364.2Bottle gourd (USVL1VR-Ls)lsimedB255
MELO3C035364.2Watermelon (Charleston Gray)medwcgB127
MELO3C035364.2Watermelon (97103) v1medwmB165
MELO3C035364.2Silver-seed gourdcarmedB0174
MELO3C035364.2Cucumber (Chinese Long) v3cucmedB009
MELO3C035364.2Watermelon (97103) v2medwmbB127
MELO3C035364.2Wax gourdmedwgoB176