MELO3C035342.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C035342.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	B-cell receptor-associated protein 31-like
Location	chr12 : 6202435 .. 6202685 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTTTAACTGCTTGTAAAGATTGGGTTACTAATAGCATTTGTTATAAAGATTTTAGATCAGCTGAAAATGGGTAAAGGTCCAGCAACTGTTAAAACAATTGCTGCTACAATGTCTGTCATTCTCTTGTCTAGTCTTATGAATATTGTTAAGATCCAGAACAAAGGTGCAAAGCTTGAGACAATGTCACCCATTGATCAGGTTCTTTGGAGGACACAGTTGCTTGAGGCTTCACTTATTTGTATGCTCTAG

mRNA sequence

CATTTTAACTGCTTGTAAAGATTGGGTTACTAATAGCATTTGTTATAAAGATTTTAGATCAGCTGAAAATGGGTAAAGGTCCAGCAACTGTTAAAACAATTGCTGCTACAATGTCTGTCATTCTCTTGTCTAGTCTTATGAATATTGTTAAGATCCAGAACAAAGGTGCAAAGCTTGAGACAATGTCACCCATTGATCAGGTTCTTTGGAGGACACAGTTGCTTGAGGCTTCACTTATTTGTATGCTCTAG

Coding sequence (CDS)

ATGGGTAAAGGTCCAGCAACTGTTAAAACAATTGCTGCTACAATGTCTGTCATTCTCTTGTCTAGTCTTATGAATATTGTTAAGATCCAGAACAAAGGTGCAAAGCTTGAGACAATGTCACCCATTGATCAGGTTCTTTGGAGGACACAGTTGCTTGAGGCTTCACTTATTTGTATGCTCTAG

Protein sequence

MGKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKLETMSPIDQVLWRTQLLEASLICML

Homology

[Close]

BLAST of MELO3C035342.2 vs. NCBI nr
Match: XP_004144386.1 (PREDICTED: uncharacterized protein LOC101213598 [Cucumis sativus] >KGN58366.1 hypothetical protein Csa_3G629240 [Cucumis sativus])

HSP 1 Score: 102.4 bits (254), Expect = 5.3e-19
Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 0


Query: 1  MGKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKLETMSPIDQVLWRTQLLEASLI 58
          MGKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKL TMSP+DQVLWRTQLLEASLI
Sbjct: 39 MGKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKLGTMSPMDQVLWRTQLLEASLI 95

[Close]

BLAST of MELO3C035342.2 vs. NCBI nr
Match: XP_008460368.1 (PREDICTED: uncharacterized protein LOC103499211 [Cucumis melo])

HSP 1 Score: 102.4 bits (254), Expect = 5.3e-19
Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 0


Query: 1  MGKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKLETMSPIDQVLWRTQLLEASLI 58
          MGKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKL TMSP+DQVLWRTQLLEASLI
Sbjct: 39 MGKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKLGTMSPMDQVLWRTQLLEASLI 95

[Close]

BLAST of MELO3C035342.2 vs. NCBI nr
Match: XP_022159831.1 (uncharacterized protein LOC111026135 [Momordica charantia])

HSP 1 Score: 102.4 bits (254), Expect = 5.3e-19
Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 0


Query: 1  MGKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKLETMSPIDQVLWRTQLLEASLI 58
          MGKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKL TMSP+DQVLWRTQLLEASLI
Sbjct: 39 MGKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKLGTMSPMDQVLWRTQLLEASLI 95

[Close]

BLAST of MELO3C035342.2 vs. NCBI nr
Match: XP_022995971.1 (uncharacterized protein LOC111491325 [Cucurbita maxima] >XP_023532109.1 uncharacterized protein LOC111794371 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 101.3 bits (251), Expect = 1.2e-18
Identity = 54/57 (94.74%), Postives = 56/57 (98.25%), Query Frame = 0


Query: 1  MGKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKLETMSPIDQVLWRTQLLEASLI 58
          MGKGPATV+TIAATMSVILLSSLMNIVKIQNKGAKL TMSP+DQVLWRTQLLEASLI
Sbjct: 39 MGKGPATVRTIAATMSVILLSSLMNIVKIQNKGAKLGTMSPMDQVLWRTQLLEASLI 95

[Close]

BLAST of MELO3C035342.2 vs. NCBI nr
Match: XP_022930944.1 (uncharacterized protein LOC111437285 [Cucurbita moschata])

HSP 1 Score: 99.8 bits (247), Expect = 3.4e-18
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0


Query: 2  GKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKLETMSPIDQVLWRTQLLEASLI 58
          GKGPATV+TIAATMSVILLSSLMNIVKIQNKGAKL TMSP+DQVLWRTQLLEASLI
Sbjct: 40 GKGPATVRTIAATMSVILLSSLMNIVKIQNKGAKLGTMSPMDQVLWRTQLLEASLI 95

[Close]

BLAST of MELO3C035342.2 vs. TAIR10
Match: AT5G48660.1 (B-cell receptor-associated protein 31-like )

HSP 1 Score: 93.6 bits (231), Expect = 4.5e-20
Identity = 49/57 (85.96%), Postives = 53/57 (92.98%), Query Frame = 0


Query: 1  MGKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKLETMSPIDQVLWRTQLLEASLI 58
          MGKGPATVKTIA TMSVIL S+LM+IVKIQNKGAKL TMSP+DQVLWRT LLEASL+
Sbjct: 39 MGKGPATVKTIAGTMSVILFSNLMSIVKIQNKGAKLGTMSPMDQVLWRTHLLEASLL 95

[Close]

BLAST of MELO3C035342.2 vs. TAIR10
Match: AT3G07190.1 (B-cell receptor-associated protein 31-like )

HSP 1 Score: 90.9 bits (224), Expect = 2.9e-19
Identity = 47/57 (82.46%), Postives = 53/57 (92.98%), Query Frame = 0


Query: 1  MGKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKLETMSPIDQVLWRTQLLEASLI 58
          +GK PAT+KTIA TMSVILLS+LMNI+KIQNKGAKL TMSP+DQVLWRT LLEASL+
Sbjct: 39 LGKRPATLKTIAGTMSVILLSNLMNIIKIQNKGAKLGTMSPMDQVLWRTHLLEASLM 95

[Close]

BLAST of MELO3C035342.2 vs. TAIR10
Match: AT5G42570.1 (B-cell receptor-associated 31-like)

HSP 1 Score: 50.4 bits (119), Expect = 4.3e-07
Identity = 27/56 (48.21%), Postives = 37/56 (66.07%), Query Frame = 0


Query: 2  GKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKLETMSPIDQVLWRTQLLEASLI 58
          G+GP  VKTI  T+ V+LLSS+ ++V IQ +      ++P DQVL    LLEASL+
Sbjct: 39 GRGPVVVKTIGTTVFVVLLSSIYSLVNIQRRSEDGAVLNPTDQVLASKHLLEASLM 94

[Close]

BLAST of MELO3C035342.2 vs. TAIR10
Match: AT1G11905.1 (B-cell receptor-associated protein 31-like )

HSP 1 Score: 42.4 bits (98), Expect = 1.2e-04
Identity = 19/56 (33.93%), Postives = 40/56 (71.43%), Query Frame = 0


Query: 2  GKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKLETMSPIDQVLWRTQLLEASLI 58
          G+GP  ++T++AT+ V+L++S+ N++ IQ +  +   ++P D+V+    LLE++L+
Sbjct: 39 GRGPVVIQTVSATVIVLLVTSVYNMMGIQKRWIEDGVVNPTDEVIMAKHLLESTLM 94

[Close]

BLAST of MELO3C035342.2 vs. TrEMBL
Match: tr|A0A1S3CBV8|A0A1S3CBV8_CUCME (uncharacterized protein LOC103499211 OS=Cucumis melo OX=3656 GN=LOC103499211 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.5e-19
Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 0


Query: 1  MGKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKLETMSPIDQVLWRTQLLEASLI 58
          MGKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKL TMSP+DQVLWRTQLLEASLI
Sbjct: 39 MGKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKLGTMSPMDQVLWRTQLLEASLI 95

[Close]

BLAST of MELO3C035342.2 vs. TrEMBL
Match: tr|A0A0A0LE44|A0A0A0LE44_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G629240 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.5e-19
Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 0


Query: 1  MGKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKLETMSPIDQVLWRTQLLEASLI 58
          MGKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKL TMSP+DQVLWRTQLLEASLI
Sbjct: 39 MGKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKLGTMSPMDQVLWRTQLLEASLI 95

[Close]

BLAST of MELO3C035342.2 vs. TrEMBL
Match: tr|A0A151RRL7|A0A151RRL7_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_033263 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 8.6e-18
Identity = 52/57 (91.23%), Postives = 54/57 (94.74%), Query Frame = 0


Query: 1  MGKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKLETMSPIDQVLWRTQLLEASLI 58
          MGKGPATVKTIA TMSVILLSSLMNIVKIQNKGAKL TMSP+DQVLWRT LLEASL+
Sbjct: 39 MGKGPATVKTIAGTMSVILLSSLMNIVKIQNKGAKLGTMSPMDQVLWRTHLLEASLM 95

[Close]

BLAST of MELO3C035342.2 vs. TrEMBL
Match: tr|B9S4Z8|B9S4Z8_RICCO (Bcr-associated protein, bap, putative OS=Ricinus communis OX=3988 GN=RCOM_1719170 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.5e-17
Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 0


Query: 1  MGKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKLETMSPIDQVLWRTQLLEASLI 58
          MGKGPATVKTIA+TMSVILLSSLM+I+KIQNKGAKL TMSP+DQVLWRT LLEASLI
Sbjct: 39 MGKGPATVKTIASTMSVILLSSLMSIIKIQNKGAKLGTMSPMDQVLWRTHLLEASLI 95

[Close]

BLAST of MELO3C035342.2 vs. TrEMBL
Match: tr|A0A0B0NB26|A0A0B0NB26_GOSAR (Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_09194 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.5e-17
Identity = 52/57 (91.23%), Postives = 54/57 (94.74%), Query Frame = 0


Query: 1  MGKGPATVKTIAATMSVILLSSLMNIVKIQNKGAKLETMSPIDQVLWRTQLLEASLI 58
          MGKGPATVKTIA TMSVILLSSLM+IVKIQNKGAKL TMSP+DQVLWRT LLEASLI
Sbjct: 39 MGKGPATVKTIAGTMSVILLSSLMSIVKIQNKGAKLGTMSPMDQVLWRTHLLEASLI 95

The following BLAST results are available for this feature:

BLAST of MELO3C035342.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144386.1	5.3e-19	96.49	PREDICTED: uncharacterized protein LOC101213598 [Cucumis sativus] >KGN58366.1 hy...	[more]
XP_008460368.1	5.3e-19	96.49	PREDICTED: uncharacterized protein LOC103499211 [Cucumis melo]	[more]
XP_022159831.1	5.3e-19	96.49	uncharacterized protein LOC111026135 [Momordica charantia]	[more]
XP_022995971.1	1.2e-18	94.74	uncharacterized protein LOC111491325 [Cucurbita maxima] >XP_023532109.1 uncharac...	[more]
XP_022930944.1	3.4e-18	94.64	uncharacterized protein LOC111437285 [Cucurbita moschata]	[more]

BLAST of MELO3C035342.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G48660.1	4.5e-20	85.96	B-cell receptor-associated protein 31-like	[more]
AT3G07190.1	2.9e-19	82.46	B-cell receptor-associated protein 31-like	[more]
AT5G42570.1	4.3e-07	48.21	B-cell receptor-associated 31-like	[more]
AT1G11905.1	1.2e-04	33.93	B-cell receptor-associated protein 31-like	[more]

BLAST of MELO3C035342.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C035342.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CBV8\|A0A1S3CBV8_CUCME	3.5e-19	96.49	uncharacterized protein LOC103499211 OS=Cucumis melo OX=3656 GN=LOC103499211 PE=...	[more]
tr\|A0A0A0LE44\|A0A0A0LE44_CUCSA	3.5e-19	96.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G629240 PE=4 SV=1	[more]
tr\|A0A151RRL7\|A0A151RRL7_CAJCA	8.6e-18	91.23	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_033263 PE=4 SV=1	[more]
tr\|B9S4Z8\|B9S4Z8_RICCO	1.5e-17	89.47	Bcr-associated protein, bap, putative OS=Ricinus communis OX=3988 GN=RCOM_171917...	[more]
tr\|A0A0B0NB26\|A0A0B0NB26_GOSAR	1.5e-17	91.23	Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_09194 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane
GO:0005783	endoplasmic reticulum

Vocabulary: **Biological Process**
Term	Definition
GO:0006886	intracellular protein transport

Vocabulary: **INTERPRO**
Term	Definition
IPR008417	BAP29/BAP31

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035342.2.1	MELO3C035342.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12701:SF13	B-CELL RECEPTOR-ASSOCIATED PROTEIN 31-LIKE PROTEIN	coord: 1..57
IPR008417	B-cell receptor-associated protein 29/31	PANTHER	PTHR12701	BCR-ASSOCIATED PROTEIN, BAP	coord: 1..57

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C035342.2	Cucumber (Gy14) v2	cgybmedB009
MELO3C035342.2	Cucurbita maxima (Rimu)	cmamedB215
MELO3C035342.2	Cucurbita maxima (Rimu)	cmamedB451
MELO3C035342.2	Cucurbita moschata (Rifu)	cmomedB203
MELO3C035342.2	Cucurbita moschata (Rifu)	cmomedB439
MELO3C035342.2	Cucurbita pepo (Zucchini)	cpemedB563
MELO3C035342.2	Cucurbita pepo (Zucchini)	cpemedB583
MELO3C035342.2	Wild cucumber (PI 183967)	cpimedB011
MELO3C035342.2	Cucumber (Chinese Long) v2	cumedB010
MELO3C035342.2	Cucumber (Chinese Long) v2	cumedB173
MELO3C035342.2	Melon (DHL92) v3.6.1	medmedB072
MELO3C035342.2	Bottle gourd (USVL1VR-Ls)	lsimedB255
MELO3C035342.2	Watermelon (Charleston Gray)	medwcgB141
MELO3C035342.2	Watermelon (97103) v1	medwmB143
MELO3C035342.2	Silver-seed gourd	carmedB0452
MELO3C035342.2	Silver-seed gourd	carmedB1052
MELO3C035342.2	Cucumber (Chinese Long) v3	cucmedB009
MELO3C035342.2	Watermelon (97103) v2	medwmbB142
MELO3C035342.2	Wax gourd	medwgoB176