MELO3C035339.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C035339.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionPHD finger alfin-like protein
Locationchr12 : 6230342 .. 6235452 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTACTGCCTAGCCACCTCTTTGCGCCGTTCAACTTGCCAAACGTCGACAGCACGCCACGCCACAAAGTTGAACCTAATGTCTGTGGCGAAACCGAGCGTTTACAGTCAAAAGTTGAACCTCAATGTCGAATCCCTCTTGTGTTGAGATTTGTCGTTGGTGAAGCTCAATATACGCCATTAAAGCTATTGTGGTGAGTATTTATAAGAGAGAATATCGTTGGTGAGTATTTATGATTTTCTTGGAATTTTTTATACCAATAGGCTTTTAACTCAAATTAGTTGATAACTTTTCTCATTTCAATCTTTCCATTTCCGATTAATCAAGAAATTTTCTCATTTCATTTTTTGTTTTGAATGGATGCATTGTTTTTTCTTTTCTTTTCTCTTCTCTTCAATTTTTTTTTTTTACAAAACTATATGTTAAAATCTTAAATTCTGAGATTCTATCAAGGAAAATCAGTCCAAGAGTTTTTGATGTTGATCCATGTTTTTTCTGTTTCACCTATGGTCATACTAGCATTCGATGAGTATGTTACAACTACTATGTGAGAGAAGTATTGAATACAATCGACCACATGGTTTTCCTTTAGTTTGCACAGTGACAACAAGCTTTGTTCCCTGCAATCATATTGATTCTCTCTCTTGGATAGAAATATGAAGATAAAATAAAGGAGAAGGGTGAGGTACCAGTTATGTTCAGGTATAAAAGACTCTCTTGCTCATTATTAGTGTTATTGTTCTTCATGTAGTTAAATTATTCTTCCCTTTCAAGAATATACCATAGTTTGTAATTTATATTCATGCACTGTAGTTTATCTTCTGGCCAGTCATTTGGAACCTTCAAAAAGATGAACAACTGAAGAGGAAGAAGAGAGTGGGAACATTCAAATCATGATGTGAGAACTCTAATTGATTGTCTGTGCAACTATATTATTCCTTATATTGCATTTATGGAGTTTATTTGACTCTTTCCTGCCACTTTAGGACTCTGTTTACCACCACCCTACACTAAATTCCACTGGAGCTCTACCACCTAGGAAACCTCCAATGTTGAAATCATCAATTGTTAAGTTATTTTCTAGGTTTTCTATTCGTAAAATATTGCCATTTCTTATTGCAAGCTCTTTGTTGGTAAATAGAATAATGCTTGCTTATTTTATTGTCATTTCTTATTGTCATCTCTTGGTAAACTATTGTTATTTCTTATTGCAAGTTCTTTGTTGGTAAATAGAATAATGCTTGTTTATTCTATTGTCATCTCTGTCTGTCACCATTAGAATAATGCTTGCTTATCTTCTATTAGTAAATAGAACGAATGTATTTTAATGGTTTGCCATTTCTTTTGGTTTGAGTTTCTTAAGTATATTTTCCTGTGATAAGTTTATTTATGAATACTATATTTACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTATTGATTTAAAATTTTCTTTTATTTTTCAACTTGACATCATAATTGATCTTTGTTATCATCCAAATTACAGATTGGTCTTGGGTTACTATCGTTGCAACAACTTACTAATTTACCTTTGTTCATTTGTTTAGCCTTTGTTCATGTATTCTCCAGTCTCCTCACCTACTATTTTGGAATTGCAAAAGTACCTATTTACCTTTCCTTTCATTTTCTTTTCATTAGTTCATTTAATGTTTAATAATTCGTCAGGTTATGTGTTGTTTTCTAGCTCTTTGGATTTTGGTTAGTGTTAATACCCATTTTTCATGGAGGATTTTCTCATTTTGTTAGTTTAGATTTAGATGTGAGCTGCAAAAGTGTAGTTCCTCTCTCTATCTTTCTCAGCATGGCTAATTTTTCTCTAATCTCATTTATTCTCATTCTAGCAAAGTCCCTAGCCTTGTTGGTTAAGATACTAAAGTGTGGTGAAGTTATGTTCAGAATTTTTAGTTTCATTTTCAGTGTTGTAATTTAGTTTTAACCTTTTGGAACTCTATCCGTACTTTGGTAAGTTCTAATTCTGAGCTTTCTTTGATATATTCTTAGTATTTGTTTAGATACATGCTTTCAAGGGAGTTAGAAGCTAAGCAAAGGTTGCAAGGCGGCCAACTTAGAATAAGACATGAGGCTAAGCCATGGTAGAGACAACCTTTCTATTGAGAATTAAGTTTTTATGTTGTGGAGTCTCCGTAGAAATCAATATGATGTGGTTGTCTCATAGAAAAAAATTAGTAAAAAAGATTGATGTCTTAGGTCCTTAAGTTTTGATTACTTTTTTGTTCTTATTGTTGTCGTTTTAATGTTGGTTTTTGTTCTTGTTAGGAGTATCAGTTTTGGTTTTTTATCTGAACTTAAGTAAATTGGATTTGGTTATTAAGTTTCTGGTTTTTTGCTCTAATTTTCTGCTTTATTCATTTAAGTTCCTTATGAATCTTAGACCCCTAATGTTTTTAATACTTTTTTGTTCTTGTTGTTGCTGTTATAATATTTCGGTTATGGTTTCTGCTTCCTTATCTGAACTTAAGTAATTTAGATTTGGTTTATATATAGCACTTCTAATAAACACTATAAAAAGTAGGAAAAAAAGCGGAAAAGGAAAAACGTGGGAAAAGATTATTTAAGTTTTGGTGCGATATTTGGATTTGATAAATCTGATAGGTATTTTGATTTTGACTTTAGTTCATGTAAGAGTTATTTCAATAATAACCATGATGGTTGATTTTGCTATAAAATGTTTTTCCATGTTCTTTTGATGCAGGAGGTGGCTATTTAATATTATAAATGATATGTCAACTGTATTTGAAGTGGTCACCAATATTGCAAAGAAACAAGTTAAGCAAAAATCATCAACTGCAAATGGTAGCAAATCCAAGTCAAGTTTAAATCGGTATGTGTATCATGATCTTCATTTTTTCAGTTGGCACTTTTTGATGTGATGTAATTTTCTGTGTTGATTACTCGGATTGGTTACATATTCTATCTTTCAAGAATTTTTAGAGTGAAGCTGAAGTGCAAGGAACATGCGCAAGGCAGTCGCAGGCAAGGGAAGAGGTAGAGACATACGAAGAAGATGAAGACAAGCACAGTGACACCTTATGTAGGGCATGCGGTGAGAACTATGCTTCAGATGAATTTTGGATTTGCTGTGATATCTATGAGAAATGGTTCCATGGGAAGTTTGTTGTATGAAGAAATGCTTCAGTTTAGCAGTTTTCTTGTGATGTATTGAGTTTTCTAAAACAAGGTAGTAGTTTTTTGTTCAGGTATGTTATCAAAGGATTTTTTTTTCTTTATAAACAAAATTGTAATGCATAGAAGATAAAATATATTATTCAATGAGATATTATATGTATACTATGATAATTCTTCTATTAATAATGTAATTATGAAATGTTAATGAGGCCAAATGGTTTTAAAATATACCTACCTTTTATATTATTATTAATAGCTCTACAAAAACTGTTATTAAAGGTCAATGATTTTTTGCTACGACAACGTTTATAAAACGCTACAAAAAATTGTTTATAGCGTTTTTCCAATTGTTATTGAAAACACTATTGAAACATTTCATAGCAATTTTCCAACGCAATAAAAAACGTTATAAAAAATGTTTCTATAGCGTTTTTTCTCACATTATAAAAAGCATTTATAACATCATATTTGTGCTATTACTAGGGACATATTATAGCATTTTGCATAGCGGCGAAAAAAACGCTATGAAAAGTCATCGACTTTCAATAACATCGGCTACGACAGCATTTCGAAAATGCTATCGAAAGTCATAGATAGCCTTTTTTTAATGCTCTTGTAACTGATATTTCTTGTAGTGCAATGGTAAACCACACCACTCTACACCTCCACAACAAGCCACCACCACTACTCCATCCTCCTCTTCGTCAATGGAAAATCTCCTCCGAGAAAATATGGAGAGGAATGATGTCTTTCTACAAAGGCAAGCCAAATTCATAAGAAATCTGGAGATATAA

mRNA sequence

ATGCTACTGCCTAGCCACCTCTTTGCGCCGTTCAACTTGCCAAACGTCGACAGCACGCCACGCCACAAAGTTGAACCTAATGTCTGTGGCGAAACCGAGCGTTTACAGTCAAAAGTTGAACCTCAATGTCGAATCCCTCTTGTGTTGAGATTTGTCGACTCTGTTTACCACCACCCTACACTAAATTCCACTGGAGCTCTACCACCTAGGAAACCTCCAATGTTGAAATCATCAATTGTTAAATACATGCTTTCAAGGGAGTTAGAAGCTAAGCAAAGGTTGCAAGGCGGCCAACTTAGAATAAGACATGAGGCTAAGCCATGGAGTATCAGTTTTGGTTTTTTATCTGAACTTAAGAGGTGGCTATTTAATATTATAAATGATATGTCAACTGTATTTGAAGTGGTCACCAATATTGCAAAGAAACAAGTTAAGCAAAAATCATCAACTGCAAATGGTAGCAAATCCAAGTCAAGTTTAAATCGGTATAGTGAAGCTGAAGTGCAAGGAACATGCGCAAGGCAGTCGCAGGCAAGGGAAGAGGTAGAGACATACGAAGAAGATGAAGACAAGCACAGTGACACCTTATGTAGGGCATGCGGTGAGAACTATGCTTCAGATGAATTTTGGATTTGCTGTGATATCTATGAGAAATGGTTCCATGGGAAGTTTGTTTGCAATGGTAAACCACACCACTCTACACCTCCACAACAAGCCACCACCACTACTCCATCCTCCTCTTCGTCAATGGAAAATCTCCTCCGAGAAAATATGGAGAGGAATGATGTCTTTCTACAAAGGCAAGCCAAATTCATAAGAAATCTGGAGATATAA

Coding sequence (CDS)

ATGCTACTGCCTAGCCACCTCTTTGCGCCGTTCAACTTGCCAAACGTCGACAGCACGCCACGCCACAAAGTTGAACCTAATGTCTGTGGCGAAACCGAGCGTTTACAGTCAAAAGTTGAACCTCAATGTCGAATCCCTCTTGTGTTGAGATTTGTCGACTCTGTTTACCACCACCCTACACTAAATTCCACTGGAGCTCTACCACCTAGGAAACCTCCAATGTTGAAATCATCAATTGTTAAATACATGCTTTCAAGGGAGTTAGAAGCTAAGCAAAGGTTGCAAGGCGGCCAACTTAGAATAAGACATGAGGCTAAGCCATGGAGTATCAGTTTTGGTTTTTTATCTGAACTTAAGAGGTGGCTATTTAATATTATAAATGATATGTCAACTGTATTTGAAGTGGTCACCAATATTGCAAAGAAACAAGTTAAGCAAAAATCATCAACTGCAAATGGTAGCAAATCCAAGTCAAGTTTAAATCGGTATAGTGAAGCTGAAGTGCAAGGAACATGCGCAAGGCAGTCGCAGGCAAGGGAAGAGGTAGAGACATACGAAGAAGATGAAGACAAGCACAGTGACACCTTATGTAGGGCATGCGGTGAGAACTATGCTTCAGATGAATTTTGGATTTGCTGTGATATCTATGAGAAATGGTTCCATGGGAAGTTTGTTTGCAATGGTAAACCACACCACTCTACACCTCCACAACAAGCCACCACCACTACTCCATCCTCCTCTTCGTCAATGGAAAATCTCCTCCGAGAAAATATGGAGAGGAATGATGTCTTTCTACAAAGGCAAGCCAAATTCATAAGAAATCTGGAGATATAA

Protein sequence

MLLPSHLFAPFNLPNVDSTPRHKVEPNVCGETERLQSKVEPQCRIPLVLRFVDSVYHHPTLNSTGALPPRKPPMLKSSIVKYMLSRELEAKQRLQGGQLRIRHEAKPWSISFGFLSELKRWLFNIINDMSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEVQGTCARQSQAREEVETYEEDEDKHSDTLCRACGENYASDEFWICCDIYEKWFHGKFVCNGKPHHSTPPQQATTTTPSSSSSMENLLRENMERNDVFLQRQAKFIRNLEI
Homology
[Close]
BLAST of MELO3C035339.2 vs. NCBI nr
Match: XP_016903323.1 (PREDICTED: PHD finger protein ALFIN-LIKE 3-like [Cucumis melo])

HSP 1 Score: 169.5 bits (428), Expect = 1.6e-38
Identity = 85/97 (87.63%), Postives = 92/97 (94.85%), Query Frame = 0 

Query: 129 MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEVQGTCARQSQAREEVETYEED 188
           M TVFEVVTNIAK+QVK+KSSTANGSKSKSS  + SEAE+QGTCARQSQAR+EVETYEED
Sbjct: 1   MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSF-KSSEAEMQGTCARQSQARKEVETYEED 60

Query: 189 EDKHSDTLCRACGENYASDEFWICCDIYEKWFHGKFV 226
           +D+HSD LCRACGENYASDEFWICCDIYEKWFHGKFV
Sbjct: 61  KDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV 96

[Close]
BLAST of MELO3C035339.2 vs. NCBI nr
Match: XP_004141692.1 (PREDICTED: PHD finger protein ALFIN-LIKE 3-like isoform X1 [Cucumis sativus] >KGN45504.1 hypothetical protein Csa_7G450620 [Cucumis sativus])

HSP 1 Score: 167.2 bits (422), Expect = 8.1e-38
Identity = 90/115 (78.26%), Postives = 97/115 (84.35%), Query Frame = 0 

Query: 112 FGFLSELKRWLFNIINDMSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEVQGT 171
           FGF    +R LFN+IND+ TVFEVVT IAKKQVK+KSSTANGSKSKSS  +  EAE+QG 
Sbjct: 113 FGFDKSDRRRLFNMINDLPTVFEVVTGIAKKQVKEKSSTANGSKSKSSF-KSREAEMQGM 172

Query: 172 CARQSQAREEVET-YEEDEDKHSDTLCRACGENYASDEFWICCDIYEKWFHGKFV 226
            ARQSQAREEVET YEEDED+H DTLC ACGENYASDEFWICCDI EKWFHGK V
Sbjct: 173 YARQSQAREEVETLYEEDEDEHGDTLCGACGENYASDEFWICCDICEKWFHGKCV 226

[Close]
BLAST of MELO3C035339.2 vs. NCBI nr
Match: XP_008462330.1 (PREDICTED: PHD finger protein ALFIN-LIKE 3-like isoform X1 [Cucumis melo])

HSP 1 Score: 164.1 bits (414), Expect = 6.9e-37
Identity = 89/117 (76.07%), Postives = 96/117 (82.05%), Query Frame = 0 

Query: 112 FGFLSELKRWLFNIINDMSTVFEVVTNIAKKQVKQKSSTANGSKSKSSL--NRYSEAEVQ 171
           FGF    +R LFN+IND+ TVFEVVT IAKKQVK+KSS+ANGSKSKSS   N   EA+ Q
Sbjct: 113 FGFDKSDRRRLFNMINDLPTVFEVVTGIAKKQVKEKSSSANGSKSKSSFKSNFQREADAQ 172

Query: 172 GTCARQSQAREEVET-YEEDEDKHSDTLCRACGENYASDEFWICCDIYEKWFHGKFV 226
           G  ARQSQAREEVET YEEDED+H DTLC ACGENYASDEFWICCDI EKWFHGK V
Sbjct: 173 GMYARQSQAREEVETLYEEDEDEHGDTLCGACGENYASDEFWICCDICEKWFHGKCV 229

[Close]
BLAST of MELO3C035339.2 vs. NCBI nr
Match: XP_022992372.1 (PHD finger protein ALFIN-LIKE 3-like [Cucurbita maxima])

HSP 1 Score: 159.1 bits (401), Expect = 2.2e-35
Identity = 85/115 (73.91%), Postives = 95/115 (82.61%), Query Frame = 0 

Query: 112 FGFLSELKRWLFNIINDMSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEVQGT 171
           FGF    +R LFN+IND+ TVFEVVT +AKKQVK+KSS+ANGSKSKSSL +  EAE+QG 
Sbjct: 113 FGFDKADRRRLFNMINDLPTVFEVVTGLAKKQVKEKSSSANGSKSKSSL-KTREAEMQGV 172

Query: 172 CARQSQAREEVET-YEEDEDKHSDTLCRACGENYASDEFWICCDIYEKWFHGKFV 226
             RQ  AREEVET YEEDED+H DTLC ACGENYA+DEFWICCDI EKWFHGK V
Sbjct: 173 YVRQPLAREEVETLYEEDEDEHGDTLCGACGENYATDEFWICCDICEKWFHGKCV 226

[Close]
BLAST of MELO3C035339.2 vs. NCBI nr
Match: XP_022953587.1 (PHD finger protein ALFIN-LIKE 3-like [Cucurbita moschata])

HSP 1 Score: 152.9 bits (385), Expect = 1.6e-33
Identity = 81/115 (70.43%), Postives = 92/115 (80.00%), Query Frame = 0 

Query: 112 FGFLSELKRWLFNIINDMSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEVQGT 171
           FGF    +R LFN+IND+ TVFEVVT +AKKQVK+K+S+ANGSKSKSSL +  E E QG 
Sbjct: 113 FGFDKADRRRLFNMINDLPTVFEVVTGLAKKQVKEKASSANGSKSKSSL-KTRETETQGV 172

Query: 172 CARQSQAREEVET-YEEDEDKHSDTLCRACGENYASDEFWICCDIYEKWFHGKFV 226
             RQ  ARE+VE  YEEDED+H DTLC ACGENYA+DEFWICCDI EKWFHGK V
Sbjct: 173 YVRQPLAREDVEALYEEDEDEHGDTLCGACGENYATDEFWICCDICEKWFHGKCV 226

[Close]
BLAST of MELO3C035339.2 vs. TAIR10
Match: AT5G05610.1 (alfin-like 1)

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-19
Identity = 65/178 (36.52%), Postives = 99/178 (55.62%), Query Frame = 0 

Query: 55  VYHHPTLNSTGALPPRK-PPMLKSSIVKYMLSRE-LEAKQRLQGGQLRIRHEAKPWSISF 114
           +Y HP       LP  + PP L    +    +R+ ++ K  L    + +  +    S+S 
Sbjct: 49  LYGHPNGTWEVNLPAEEVPPELPEPALGINFARDGMQRKDWL--SLVAVHSDCWLLSVSS 108

Query: 115 GFLSELKR----WLFNIINDMSTVFEVVTNIAKKQVKQ-KSSTANGSKSKSSLNRYSEAE 174
            F + L R     LF++IND+ T+FEVVT   +K +K  K S   GSKS++ + R  E +
Sbjct: 109 YFGARLNRNERKRLFSLINDLPTLFEVVT--GRKPIKDGKPSMDLGSKSRNGVKRSIEGQ 168

Query: 175 VQGTCARQSQAREEVETYEEDEDKHSDTLCRACGENYASDEFWICCDIYEKWFHGKFV 226
            + T       +   E+YE+++D+H DTLC +CG NY +DEFWICCD+ E+W+HGK V
Sbjct: 169 TKST------PKLMEESYEDEDDEHGDTLCGSCGGNYTNDEFWICCDVCERWYHGKCV 216

[Close]
BLAST of MELO3C035339.2 vs. TAIR10
Match: AT3G11200.1 (alfin-like 2)

HSP 1 Score: 76.6 bits (187), Expect = 2.6e-14
Identity = 56/177 (31.64%), Postives = 90/177 (50.85%), Query Frame = 0 

Query: 55  VYHHPTLNSTGALPPRK-PPMLKSSIVKYMLSRE-LEAKQRLQGGQLRIRHEAKPWSISF 114
           +Y HP  +    LP  + PP L    +    +R+ ++ K  L    + +  +    S+SF
Sbjct: 51  LYGHPNESWEVNLPAEEVPPELPEPALGINFARDGMQRKDWL--SLVAVHSDCWLLSVSF 110

Query: 115 GFLSELKR----WLFNIINDMSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEV 174
            F + L R     LF++IND+ T+F+VVT   K     K S+ +GSKS++   R  + + 
Sbjct: 111 YFGARLNRNERKRLFSLINDLPTLFDVVTG-RKAMKDNKPSSDSGSKSRNGTKRSIDGQT 170

Query: 175 QGTCARQSQAREEVETYEEDEDKHSDTLCRACGENYASDEFWICCDIYEKWFHGKFV 226
           + +  +     E             DTLC +CG +Y ++EFWICCD+ E+W+HGK V
Sbjct: 171 KSSTPK---LMEXXXXXXXXXXXXGDTLCGSCGGHYTNEEFWICCDVCERWYHGKCV 221

[Close]
BLAST of MELO3C035339.2 vs. TAIR10
Match: AT2G02470.1 (alfin-like 6)

HSP 1 Score: 73.6 bits (179), Expect = 2.2e-13
Identity = 50/130 (38.46%), Postives = 64/130 (49.23%), Query Frame = 0 

Query: 112 FGFLSELKRWLFNIINDMSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEVQGT 171
           FGF    ++ LF +IN++ T+FEVV+  A KQ K  S   N SKSK S          G 
Sbjct: 113 FGFGKNERKRLFQMINELPTIFEVVSGNA-KQSKDLSVNNNNSKSKPS----------GV 172

Query: 172 CARQSQAREEV----------------ETYEEDEDKHSDTLCRACGENYASDEFWICCDI 226
            +RQS++  +V                             +C ACG+NY +DEFWICCD 
Sbjct: 173 KSRQSESLSKVAKXXXXXXXXXXXXXXXXXXXXXXXXXXAVCGACGDNYGTDEFWICCDA 231

[Close]
BLAST of MELO3C035339.2 vs. TAIR10
Match: AT5G20510.1 (alfin-like 5)

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-11
Identity = 44/122 (36.07%), Postives = 58/122 (47.54%), Query Frame = 0 

Query: 112 FGFLSELKRWLFNIINDMSTVFEVVTNIAKKQVKQKSSTA--------NGSKSKSSLNRY 171
           FGF    ++ LF++IN++ TV+EVVT  A+KQ K+  S+A                    
Sbjct: 114 FGFDRADRKRLFSMINEVPTVYEVVTGNAEKQTKEMPSSAXXXXXXXXXXXXXXXXXXXX 173

Query: 172 SEAEVQGTCARQSQAREEVETYEEDEDKHSDTLCRACGENYASDEFWICCDIYEKWFHGK 226
                                         +TLC ACG+NYASDEFWICCD+ EKWFHG+
Sbjct: 174 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETLCGACGDNYASDEFWICCDMCEKWFHGE 233

[Close]
BLAST of MELO3C035339.2 vs. TAIR10
Match: AT5G26210.1 (alfin-like 4)

HSP 1 Score: 65.9 bits (159), Expect = 4.6e-11
Identity = 43/118 (36.44%), Postives = 52/118 (44.07%), Query Frame = 0 

Query: 112 FGFLSELKRWLFNIINDMSTVFEVVTNIAKKQVKQKS----STANGSKSKSSLNRYSEAE 171
           FGF    ++ LFN++ND+ T+FEVV   AKKQ K KS                       
Sbjct: 113 FGFDKADRKRLFNMVNDLPTIFEVVAGTAKKQGKDKSXXXXXXXXXXXXXXXXXXXXXXX 172

Query: 172 VQGTCARQSQAREEVETYEEDEDKHSDTLCRACGENYASDEFWICCDIYEKWFHGKFV 226
                                      T C ACGE+YA+DEFWICCD+ E WFHGK V
Sbjct: 173 XXXXXXXXXXXXXXXXXXXXXXXXXXXTQCGACGESYAADEFWICCDLCEMWFHGKCV 230

[Close]
BLAST of MELO3C035339.2 vs. Swiss-Prot
Match: sp|Q9FFF5|ALFL1_ARATH (PHD finger protein ALFIN-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=AL1 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.2e-18
Identity = 65/178 (36.52%), Postives = 99/178 (55.62%), Query Frame = 0 

Query: 55  VYHHPTLNSTGALPPRK-PPMLKSSIVKYMLSRE-LEAKQRLQGGQLRIRHEAKPWSISF 114
           +Y HP       LP  + PP L    +    +R+ ++ K  L    + +  +    S+S 
Sbjct: 49  LYGHPNGTWEVNLPAEEVPPELPEPALGINFARDGMQRKDWL--SLVAVHSDCWLLSVSS 108

Query: 115 GFLSELKR----WLFNIINDMSTVFEVVTNIAKKQVKQ-KSSTANGSKSKSSLNRYSEAE 174
            F + L R     LF++IND+ T+FEVVT   +K +K  K S   GSKS++ + R  E +
Sbjct: 109 YFGARLNRNERKRLFSLINDLPTLFEVVT--GRKPIKDGKPSMDLGSKSRNGVKRSIEGQ 168

Query: 175 VQGTCARQSQAREEVETYEEDEDKHSDTLCRACGENYASDEFWICCDIYEKWFHGKFV 226
            + T       +   E+YE+++D+H DTLC +CG NY +DEFWICCD+ E+W+HGK V
Sbjct: 169 TKST------PKLMEESYEDEDDEHGDTLCGSCGGNYTNDEFWICCDVCERWYHGKCV 216

[Close]
BLAST of MELO3C035339.2 vs. Swiss-Prot
Match: sp|B8AMA8|ALFL3_ORYSI (PHD finger protein ALFIN-LIKE 3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_14081 PE=3 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 3.5e-16
Identity = 48/121 (39.67%), Postives = 75/121 (61.98%), Query Frame = 0 

Query: 109 SISFGFLSEL----KRWLFNIINDMSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYS 168
           S++F F + L    ++ LFN+IND+ TV+E +  + +K V+ +S   +  KSK S  R  
Sbjct: 108 SVAFFFAARLNGNERKRLFNMINDLPTVYEAL--VDRKHVRDRSGVDSSGKSKHSTKRTG 167

Query: 169 EAEVQGTCARQSQAREEVETYEEDEDKHSDTLCRACGENYASDEFWICCDIYEKWFHGKF 226
           E +V+       ++R   E YE+D+++H++T C  CG  Y ++EFWI CDI E+WFHGK 
Sbjct: 168 EGQVK-------RSRVVAEEYEDDDEEHNETFCGTCGGLYNANEFWIGCDICERWFHGKC 219

[Close]
BLAST of MELO3C035339.2 vs. Swiss-Prot
Match: sp|Q84TV4|ALFL3_ORYSJ (PHD finger protein ALFIN-LIKE 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0818300 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.5e-16
Identity = 48/121 (39.67%), Postives = 75/121 (61.98%), Query Frame = 0 

Query: 109 SISFGFLSEL----KRWLFNIINDMSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYS 168
           S++F F + L    ++ LFN+IND+ TV+E +  + +K V+ +S   +  KSK S  R  
Sbjct: 108 SVAFFFAARLNGNERKRLFNMINDLPTVYEAL--VDRKHVRDRSGVDSSGKSKHSTKRTG 167

Query: 169 EAEVQGTCARQSQAREEVETYEEDEDKHSDTLCRACGENYASDEFWICCDIYEKWFHGKF 226
           E +V+       ++R   E YE+D+++H++T C  CG  Y ++EFWI CDI E+WFHGK 
Sbjct: 168 EGQVK-------RSRVVAEEYEDDDEEHNETFCGTCGGLYNANEFWIGCDICERWFHGKC 219

[Close]
BLAST of MELO3C035339.2 vs. Swiss-Prot
Match: sp|Q40359|ALFIN_MEDSA (PHD finger protein Alfin1 OS=Medicago sativa OX=3879 GN=ALFIN-1 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.3e-15
Identity = 51/119 (42.86%), Postives = 69/119 (57.98%), Query Frame = 0 

Query: 112 FGFLSELKRWLFNIINDMSTVFEVVTNIAKKQVKQKSSTANGSKSK---SSLNRYSEAEV 171
           FGF    ++ LF +IND+ TVFE+ T  AK+   Q ++  NGS SK   S  +R SE++ 
Sbjct: 114 FGFGKNDRKRLFQMINDLPTVFELATGTAKQSKDQLTAHNNGSNSKYKSSGKSRQSESQT 173

Query: 172 QGTCARQSQAREEVE--TYEEDEDKHSDTLCRACGENYASDEFWICCDIYEKWFHGKFV 226
           +G     +  +EEV+               C ACG+NY +DEFWICCD+ EKWFHGK V
Sbjct: 174 KGV-KMSAPVKEEVDXXXXXXXXXXXXXATCGACGDNYGTDEFWICCDMCEKWFHGKCV 231

[Close]
BLAST of MELO3C035339.2 vs. Swiss-Prot
Match: sp|A2Y0Q2|ALFL1_ORYSI (PHD finger protein ALFIN-LIKE 1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_18576 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.3e-15
Identity = 46/121 (38.02%), Postives = 73/121 (60.33%), Query Frame = 0 

Query: 109 SISFGFLSELKR----WLFNIINDMSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYS 168
           S++F + + L R     LF ++ND+ TV+EVV+   + + + +S   N S++K S    S
Sbjct: 118 SVAFYYAARLNRNDRKRLFGMMNDLPTVYEVVSGSRQSKERDRSGMDNSSRNKISSKHTS 177

Query: 169 EAEVQGTCARQSQAREEVETYEEDEDKHSDTLCRACGENYASDEFWICCDIYEKWFHGKF 226
           +         ++  +EE E Y+ED+  HS+TLC  CG  Y++DEFWI CD+ E+W+HGK 
Sbjct: 178 D-----VARVENNIKEEDEGYDEDDGDHSETLCGTCGGIYSADEFWIGCDVCERWYHGKC 233

[Close]
BLAST of MELO3C035339.2 vs. TrEMBL
Match: tr|A0A1S4E514|A0A1S4E514_CUCME (PHD finger protein ALFIN-LIKE 3-like OS=Cucumis melo OX=3656 GN=LOC107992128 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.1e-38
Identity = 85/97 (87.63%), Postives = 92/97 (94.85%), Query Frame = 0 

Query: 129 MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEVQGTCARQSQAREEVETYEED 188
           M TVFEVVTNIAK+QVK+KSSTANGSKSKSS  + SEAE+QGTCARQSQAR+EVETYEED
Sbjct: 1   MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSF-KSSEAEMQGTCARQSQARKEVETYEED 60

Query: 189 EDKHSDTLCRACGENYASDEFWICCDIYEKWFHGKFV 226
           +D+HSD LCRACGENYASDEFWICCDIYEKWFHGKFV
Sbjct: 61  KDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV 96

[Close]
BLAST of MELO3C035339.2 vs. TrEMBL
Match: tr|A0A0A0K9L1|A0A0A0K9L1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450620 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 5.4e-38
Identity = 90/115 (78.26%), Postives = 97/115 (84.35%), Query Frame = 0 

Query: 112 FGFLSELKRWLFNIINDMSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEVQGT 171
           FGF    +R LFN+IND+ TVFEVVT IAKKQVK+KSSTANGSKSKSS  +  EAE+QG 
Sbjct: 113 FGFDKSDRRRLFNMINDLPTVFEVVTGIAKKQVKEKSSTANGSKSKSSF-KSREAEMQGM 172

Query: 172 CARQSQAREEVET-YEEDEDKHSDTLCRACGENYASDEFWICCDIYEKWFHGKFV 226
            ARQSQAREEVET YEEDED+H DTLC ACGENYASDEFWICCDI EKWFHGK V
Sbjct: 173 YARQSQAREEVETLYEEDEDEHGDTLCGACGENYASDEFWICCDICEKWFHGKCV 226

[Close]
BLAST of MELO3C035339.2 vs. TrEMBL
Match: tr|A0A1S3CI87|A0A1S3CI87_CUCME (PHD finger protein ALFIN-LIKE 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500707 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 4.5e-37
Identity = 89/117 (76.07%), Postives = 96/117 (82.05%), Query Frame = 0 

Query: 112 FGFLSELKRWLFNIINDMSTVFEVVTNIAKKQVKQKSSTANGSKSKSSL--NRYSEAEVQ 171
           FGF    +R LFN+IND+ TVFEVVT IAKKQVK+KSS+ANGSKSKSS   N   EA+ Q
Sbjct: 113 FGFDKSDRRRLFNMINDLPTVFEVVTGIAKKQVKEKSSSANGSKSKSSFKSNFQREADAQ 172

Query: 172 GTCARQSQAREEVET-YEEDEDKHSDTLCRACGENYASDEFWICCDIYEKWFHGKFV 226
           G  ARQSQAREEVET YEEDED+H DTLC ACGENYASDEFWICCDI EKWFHGK V
Sbjct: 173 GMYARQSQAREEVETLYEEDEDEHGDTLCGACGENYASDEFWICCDICEKWFHGKCV 229

[Close]
BLAST of MELO3C035339.2 vs. TrEMBL
Match: tr|A0A1S3CGR0|A0A1S3CGR0_CUCME (PHD finger protein ALFIN-LIKE 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500707 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 5.2e-33
Identity = 82/115 (71.30%), Postives = 89/115 (77.39%), Query Frame = 0 

Query: 112 FGFLSELKRWLFNIINDMSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEVQGT 171
           FGF    +R LFN+IND+ TVFEVVT IAKKQVK+KSS+ANG           EA+ QG 
Sbjct: 113 FGFDKSDRRRLFNMINDLPTVFEVVTGIAKKQVKEKSSSANG-XXXXXXXXXREADAQGM 172

Query: 172 CARQSQAREEVET-YEEDEDKHSDTLCRACGENYASDEFWICCDIYEKWFHGKFV 226
            ARQSQAREEVET YEEDED+H DTLC ACGENYASDEFWICCDI EKWFHGK V
Sbjct: 173 YARQSQAREEVETLYEEDEDEHGDTLCGACGENYASDEFWICCDICEKWFHGKCV 226

[Close]
BLAST of MELO3C035339.2 vs. TrEMBL
Match: tr|B9HD31|B9HD31_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G223500v3 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.8e-25
Identity = 67/116 (57.76%), Postives = 83/116 (71.55%), Query Frame = 0 

Query: 112 FGFLSELKRWLFNIINDMSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEVQGT 171
           FGF    ++ LFN+IND+ TVFEVVT  AKKQVK+KSS +N S +K+       +E QG 
Sbjct: 113 FGFDKADRKRLFNMINDLPTVFEVVTGTAKKQVKEKSSVSNHSSNKTKXXXXXGSESQGK 172

Query: 172 CARQSQAREE--VETYEEDEDKHSDTLCRACGENYASDEFWICCDIYEKWFHGKFV 226
            ++  QA++E      EEDE++H +TLC ACGENYASDEFWICCDI EKWFHGK V
Sbjct: 173 FSKVMQAKDEDGEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCV 228

The following BLAST results are available for this feature:
BLAST of MELO3C035339.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016903323.11.6e-3887.63PREDICTED: PHD finger protein ALFIN-LIKE 3-like [Cucumis melo][more]
XP_004141692.18.1e-3878.26PREDICTED: PHD finger protein ALFIN-LIKE 3-like isoform X1 [Cucumis sativus] >KG... [more]
XP_008462330.16.9e-3776.07PREDICTED: PHD finger protein ALFIN-LIKE 3-like isoform X1 [Cucumis melo][more]
XP_022992372.12.2e-3573.91PHD finger protein ALFIN-LIKE 3-like [Cucurbita maxima][more]
XP_022953587.11.6e-3370.43PHD finger protein ALFIN-LIKE 3-like [Cucurbita moschata][more]
BLAST of MELO3C035339.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G05610.11.2e-1936.52alfin-like 1[more]
AT3G11200.12.6e-1431.64alfin-like 2[more]
AT2G02470.12.2e-1338.46alfin-like 6[more]
AT5G20510.11.2e-1136.07alfin-like 5[more]
AT5G26210.14.6e-1136.44alfin-like 4[more]
BLAST of MELO3C035339.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FFF5|ALFL1_ARATH2.2e-1836.52PHD finger protein ALFIN-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=AL1 PE=1 SV=1[more]
sp|B8AMA8|ALFL3_ORYSI3.5e-1639.67PHD finger protein ALFIN-LIKE 3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_14... [more]
sp|Q84TV4|ALFL3_ORYSJ3.5e-1639.67PHD finger protein ALFIN-LIKE 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03... [more]
sp|Q40359|ALFIN_MEDSA1.3e-1542.86PHD finger protein Alfin1 OS=Medicago sativa OX=3879 GN=ALFIN-1 PE=1 SV=1[more]
sp|A2Y0Q2|ALFL1_ORYSI1.3e-1538.02PHD finger protein ALFIN-LIKE 1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_18... [more]
BLAST of MELO3C035339.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E514|A0A1S4E514_CUCME1.1e-3887.63PHD finger protein ALFIN-LIKE 3-like OS=Cucumis melo OX=3656 GN=LOC107992128 PE=... [more]
tr|A0A0A0K9L1|A0A0A0K9L1_CUCSA5.4e-3878.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450620 PE=4 SV=1[more]
tr|A0A1S3CI87|A0A1S3CI87_CUCME4.5e-3776.07PHD finger protein ALFIN-LIKE 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3CGR0|A0A1S3CGR0_CUCME5.2e-3371.30PHD finger protein ALFIN-LIKE 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|B9HD31|B9HD31_POPTR1.8e-2557.76Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G223500v3 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD
IPR013083Znf_RING/FYVE/PHD
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0042393 histone binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035339.2.1MELO3C035339.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 189..233
e-value: 8.9E-10
score: 39.7
NoneNo IPR availablePFAMPF12622NpwBPcoord: 53..84
e-value: 1.9E-5
score: 25.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..178
NoneNo IPR availablePANTHERPTHR12321CPG BINDING PROTEINcoord: 111..225
NoneNo IPR availablePANTHERPTHR12321:SF98PHD FINGER PROTEIN ALFIN-LIKE 3-RELATEDcoord: 111..225
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILYSSF57903FYVE/PHD zinc fingercoord: 178..223

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C035339.2Wax gourdmedwgoB176
MELO3C035339.2Cucumber (Gy14) v2cgybmedB009
MELO3C035339.2Cucurbita maxima (Rimu)cmamedB215
MELO3C035339.2Cucurbita maxima (Rimu)cmamedB451
MELO3C035339.2Cucurbita moschata (Rifu)cmomedB203
MELO3C035339.2Cucurbita moschata (Rifu)cmomedB439
MELO3C035339.2Cucurbita pepo (Zucchini)cpemedB563
MELO3C035339.2Cucurbita pepo (Zucchini)cpemedB583
MELO3C035339.2Wild cucumber (PI 183967)cpimedB011
MELO3C035339.2Cucumber (Chinese Long) v2cumedB010
MELO3C035339.2Cucumber (Chinese Long) v2cumedB173
MELO3C035339.2Melon (DHL92) v3.6.1medmedB072
MELO3C035339.2Bottle gourd (USVL1VR-Ls)lsimedB255
MELO3C035339.2Watermelon (Charleston Gray)medwcgB141
MELO3C035339.2Watermelon (97103) v1medwmB143
MELO3C035339.2Silver-seed gourdcarmedB0452
MELO3C035339.2Silver-seed gourdcarmedB1052
MELO3C035339.2Cucumber (Chinese Long) v3cucmedB009
MELO3C035339.2Watermelon (97103) v2medwmbB142