MELO3C035290.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C035290.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionVacuolar protein sorting-associated protein 33 like
Locationchr12 : 2453097 .. 2455550 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTTTTTTCTTTTTTTTGCGCATTGTCATCGTTCGTCTGAAGGGGTCTGAAGAACGAAAGGGGCTGCTCTGAAGAACGAAAATCCCTTGTCCCTAGCTCTCACGATCTCTGTTCGTCTCTTTACTGCCGATGGCCATTCTCGACGACGGTCGTTCTATCGACGACCGTTCAACCGAAAAACAGAGCGAAAGAAAAATCCCTCCCTCTCTCGATGGCTGTTCGACCGACGACGACGACAACGTCTCTCCTGGTAAGTAACATTCTCTATTTCTCGAATTTCTCTATTTCATTGTTAAGATAGTGATAGTGTTGGTAAGTAACGGTTGAAGTTTGTTGTTGTCATAAAGAAGAGGCTTAGAGAAACCATTATTAAAATTTATAAGGTTAAGAAAGAGAAAGAACATAAGTGTTGTTGGACAGTTCACCGGCCTTGTCTTGCTCTAATCTACCATAATGTTGTGCTTTGCAACAAACATAAACACTTAACAACTTGATGTGTTTCTTAAATCAAAATTTCTCGTATGTATGATTGTTTAGGTTTTGTGTAGAACTGATTTGTGAACTTTTTGTTGCTTGTCGTTGTGTTTTCTATAATGAAAGTTTCCTAAAGAAAGTTGCCAGCAATTTGAATTTTTTGTTGCTTGTCAGTTGTGTTTGCGAAGTCATATTTTTGCGCCTGCCCAATATCAACCTTCCTTTGTCTGCTGAGCGCAAGTCACTGCAACAATGGACTGGCTGGAAATTTCATGGGATGAATTACATATAAAGGAGCATGTTGGAGCTAGTAATTTCACATCTTGTCATATCTGCTCGTATTAAATTTATAAACAGATGGCGGATTCTGAACTTTTCCCTTTAATGTTCTTTCATGCTCATTTGGTACAGTGCATCATGCTGAATGGCATGGATCGGTTAGTCTCTTTTATCTTATCTCTAACTCATGGTTCAACATTCATGTTCAGTTCATAGTGTAACAAGTTCCAACAGACAACTTTTAATCTAATATTTCATTACCTTGTTTATTTTCTATGGAGAATGGTTAGATGGAATGCTAGTTTTCTTTTGGAGTTGTCAGCTTTTGGAGCCATTGCAGAGCCCTCTACCAAATCGCTTGGTATAATAAGTACATATCTGGTATTGCAAAATACTATGTTCACTCATTCATATTCCTGAATAAATGTGTAATCATGGGATAATTATTTGGCTGTGTATGTTAGTTTTCCTTTGAGGCAATACCAAATGTGAGAACCAAAGGGAGAGCATCAGTACATGTTGCTAACATTCTAAATCATTTGCAAAGAGAGGAACCTGTTAACTCAAATGATGTAAATGTTGAACTTGAAGGCATGCCGTTCTCTCTTTCTTTTCAATTTCCTTTAAAGAATTTATGAAAGGATTGATTTATTCATTTTATTTCAGATGGTTGTGCAAGAGATAAATACACCTATTCTTATGGATAGGGAGTTATTGTACTGATTGTTAACATCTATGGCTATTCAGCATGTTGTAGTTCTTGTACGGATTGTTAGAGTGGCTACTTTTATATGGTGGACAAGACGTGATATAGATCAAAGCAATGTCTGTCTTTATTAAATCTTTCGCATTTTCAACCTCAAATCTTGAGCTACTTCTAAATGACATACTGTCACTTCTTATCTTGCATTTGTGGTGCCCTAACTGCGGAAATAAATTTCAAATATTCAAGTAGTTGTCGCCTGCACAAGCATTGGAATGTATTATGAATTTTGATCCTGAATGTGGATCGATTTTTATGTACATGTGCGGCCGTTGAAATAAGAGAGTATCGGTATTGTAGCCGAAGAGCTCTCTTCCTTTGCCTGTAATTCTTAAACTGTTGCGACTAATCTTTGCAGTATGTCGATATTTTGGGTGAATTGCTGCAAAAACTTACGAGTGTATGTTTCTTTATAGTTTGTTCATGACTTTTATAGCAATGGACTAATTTGTGTTTGGATGAAGTACTTGATAAACGTAGAATGTTAACTTCATTACTTAGGTTGTTCAGGTAGTGGAGAGTTCTTTATTAGTTTTATGTTGTCAACTATTAATGTTTTTTATATATTCTTCCCCAGTTATTTTGAATATGGGTAGTTAACTTGATTTGATTCCTTTATTGTTTGTTCTCTTTTTGAAATCACAGTTTAAGGAAATTGGCAGAAGTAGTAGGCCTGCTGAATCTTTTAAGGCGTCTGAGCAGGCTACAGAGAAGAAGAAAGGATTGGTTGAAAATAATACTAACTTTAACATTCATATCAAAAATGACTTGGAGCATTGAATAACCAAAACCAAATTCAAAAAAGTTACCCTATTTGGTATTTCTCCACCTACCTTTACCCTATTAGTCGTATAATCGGACTAACGACTCAGGAAAGTGATATGATATATAGTTCCTTGTTAAAAGTACCACACACTCTTATGGTGAGTCGTGACA

mRNA sequence

CTTTTTTTTTCTTTTTTTTGCGCATTGTCATCGTTCGTCTGAAGGGGTCTGAAGAACGAAAGGGGCTGCTCTGAAGAACGAAAATCCCTTGTCCCTAGCTCTCACGATCTCTGTTCGTCTCTTTACTGCCGATGGCCATTCTCGACGACGGTCGTTCTATCGACGACCGTTCAACCGAAAAACAGAGCGAAAGAAAAATCCCTCCCTCTCTCGATGGCTGTTCGACCGACGACGACGACAACGTCTCTCCTGTTGTGTTTGCGAAGTCATATTTTTGCGCCTGCCCAATATCAACCTTCCTTTGTCTGCTGAGCGCAAGTCACTGCAACAATGGACTGGCTGGAAATTTCATGGGATGAATTACATATAAAGGAGCATGTTGGAGCTAGTAATTTCACATCTTGTCATATCTGCTCGTATTAAATTTATAAACAGATGGCGGATTCTGAACTTTTCCCTTTAATGTTCTTTCATGCTCATTTGGTACAGTGCATCATGCTGAATGGCATGGATCGATGGAATGCTAGTTTTCTTTTGGAGTTGTCAGCTTTTGGAGCCATTGCAGAGCCCTCTACCAAATCGCTTGGTATAATAAGTACATATCTGTTTTCCTTTGAGGCAATACCAAATGTGAGAACCAAAGGGAGAGCATCAGTACATGTTGCTAACATTCTAAATCATTTGCAAAGAGAGGAACCTGTTAACTCAAATGATGTAAATGTTGAACTTGAAGTTTAAGGAAATTGGCAGAAGTAGTAGGCCTGCTGAATCTTTTAAGGCGTCTGAGCAGGCTACAGAGAAGAAGAAAGGATTGGTTGAAAATAATACTAACTTTAACATTCATATCAAAAATGACTTGGAGCATTGAATAACCAAAACCAAATTCAAAAAAGTTACCCTATTTGGTATTTCTCCACCTACCTTTACCCTATTAGTCGTATAATCGGACTAACGACTCAGGAAAGTGATATGATATATAGTTCCTTGTTAAAAGTACCACACACTCTTATGGTGAGTCGTGACA

Coding sequence (CDS)

ATGGCGGATTCTGAACTTTTCCCTTTAATGTTCTTTCATGCTCATTTGGTACAGTGCATCATGCTGAATGGCATGGATCGATGGAATGCTAGTTTTCTTTTGGAGTTGTCAGCTTTTGGAGCCATTGCAGAGCCCTCTACCAAATCGCTTGGTATAATAAGTACATATCTGTTTTCCTTTGAGGCAATACCAAATGTGAGAACCAAAGGGAGAGCATCAGTACATGTTGCTAACATTCTAAATCATTTGCAAAGAGAGGAACCTGTTAACTCAAATGATGTAAATGTTGAACTTGAAGTTTAA

Protein sequence

MADSELFPLMFFHAHLVQCIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVELEV
BLAST of MELO3C035290.2 vs. NCBI nr
Match: XP_016902108.1 (PREDICTED: vacuolar protein-sorting-associated protein 33 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 199.9 bits (507), Expect = 4.1e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0

Query: 1   MADSELFPLMFFHAHLVQCIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSF 60
           MADSELFPLMFFHAHLVQCIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSF
Sbjct: 1   MADSELFPLMFFHAHLVQCIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSF 60

Query: 61  EAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVELEV 101
           EAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVELEV
Sbjct: 61  EAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVELEV 100

BLAST of MELO3C035290.2 vs. NCBI nr
Match: XP_008457513.1 (PREDICTED: vacuolar protein-sorting-associated protein 33 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 161.8 bits (408), Expect = 1.2e-36
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0

Query: 19  CIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSFEAIPNVRTKGRASVHVAN 78
           CIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSFEAIPNVRTKGRASVHVAN
Sbjct: 5   CIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSFEAIPNVRTKGRASVHVAN 64

Query: 79  ILNHLQREEPVNSNDVNVELE 100
           ILNHLQREEPVNSNDVNVELE
Sbjct: 65  ILNHLQREEPVNSNDVNVELE 85

BLAST of MELO3C035290.2 vs. NCBI nr
Match: XP_008445756.1 (PREDICTED: uncharacterized protein LOC103488684 isoform X7 [Cucumis melo])

HSP 1 Score: 70.9 bits (172), Expect = 2.9e-09
Identity = 35/46 (76.09%), Postives = 40/46 (86.96%), Query Frame = 0

Query: 53 ISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVEL 99
          +  +LFSF AIPNVR KGRA V VA+ILNHLQR+EPVNSNDV+VEL
Sbjct: 28 LPNHLFSFGAIPNVRAKGRALVRVADILNHLQRKEPVNSNDVHVEL 73

BLAST of MELO3C035290.2 vs. NCBI nr
Match: XP_016900092.1 (PREDICTED: uncharacterized protein LOC103488684 isoform X3 [Cucumis melo])

HSP 1 Score: 70.9 bits (172), Expect = 2.9e-09
Identity = 35/46 (76.09%), Postives = 40/46 (86.96%), Query Frame = 0

Query: 53 ISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVEL 99
          +  +LFSF AIPNVR KGRA V VA+ILNHLQR+EPVNSNDV+VEL
Sbjct: 28 LPNHLFSFGAIPNVRAKGRALVRVADILNHLQRKEPVNSNDVHVEL 73

BLAST of MELO3C035290.2 vs. NCBI nr
Match: XP_008446838.1 (PREDICTED: vacuolar protein-sorting-associated protein 33 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-08
Identity = 41/70 (58.57%), Postives = 48/70 (68.57%), Query Frame = 0

Query: 31  SFLLELSAFGAIAEPSTKSLGIISTYL----FSFEAIPNVRTKGRASVHVANILNHLQRE 90
           SF L+ S    + +  T SL  I+  +    FSF AIPNVR KGRASV VA+ILNHLQ E
Sbjct: 152 SFELDRSNKEYLVDGDTSSLWHIAKAIHKLEFSFGAIPNVRAKGRASVRVADILNHLQTE 211

Query: 91  EPVNSNDVNV 97
           EPVNSNDVN+
Sbjct: 212 EPVNSNDVNM 221

BLAST of MELO3C035290.2 vs. TAIR10
Match: AT3G54860.2 (Sec1/munc18-like (SM) proteins superfamily)

HSP 1 Score: 55.8 bits (133), Expect = 1.7e-08
Identity = 34/68 (50.00%), Postives = 42/68 (61.76%), Query Frame = 0

Query: 31  SFLLELSAFGAIAEPSTKSLGIISTYL----FSFEAIPNVRTKGRASVHVANILNHLQRE 90
           SF LELS    + +    SL  I+  +    FSF  I  +R KG+ASV VA+ILN +Q E
Sbjct: 152 SFELELSEKDCLVDGDVSSLWHIAKAIHELEFSFGVISKMRAKGKASVRVADILNRMQVE 211

Query: 91  EPVNSNDV 95
           EPVNSNDV
Sbjct: 212 EPVNSNDV 219

BLAST of MELO3C035290.2 vs. Swiss-Prot
Match: sp|Q94KJ7|VPS33_ARATH (Vacuolar protein-sorting-associated protein 33 homolog OS=Arabidopsis thaliana OX=3702 GN=VPS33 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.1e-07
Identity = 34/68 (50.00%), Postives = 42/68 (61.76%), Query Frame = 0

Query: 31  SFLLELSAFGAIAEPSTKSLGIISTYL----FSFEAIPNVRTKGRASVHVANILNHLQRE 90
           SF LELS    + +    SL  I+  +    FSF  I  +R KG+ASV VA+ILN +Q E
Sbjct: 152 SFELELSEKDCLVDGDVSSLWHIAKAIHELEFSFGVISKMRAKGKASVRVADILNRMQVE 211

Query: 91  EPVNSNDV 95
           EPVNSNDV
Sbjct: 212 EPVNSNDV 219

BLAST of MELO3C035290.2 vs. TrEMBL
Match: tr|A0A1S4E1K7|A0A1S4E1K7_CUCME (vacuolar protein-sorting-associated protein 33 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497187 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.7e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0

Query: 1   MADSELFPLMFFHAHLVQCIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSF 60
           MADSELFPLMFFHAHLVQCIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSF
Sbjct: 1   MADSELFPLMFFHAHLVQCIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSF 60

Query: 61  EAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVELEV 101
           EAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVELEV
Sbjct: 61  EAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVELEV 100

BLAST of MELO3C035290.2 vs. TrEMBL
Match: tr|A0A1S3C5U0|A0A1S3C5U0_CUCME (vacuolar protein-sorting-associated protein 33 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497187 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 8.1e-37
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0

Query: 19  CIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSFEAIPNVRTKGRASVHVAN 78
           CIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSFEAIPNVRTKGRASVHVAN
Sbjct: 5   CIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSFEAIPNVRTKGRASVHVAN 64

Query: 79  ILNHLQREEPVNSNDVNVELE 100
           ILNHLQREEPVNSNDVNVELE
Sbjct: 65  ILNHLQREEPVNSNDVNVELE 85

BLAST of MELO3C035290.2 vs. TrEMBL
Match: tr|A0A1S3BE53|A0A1S3BE53_CUCME (uncharacterized protein LOC103488684 isoform X7 OS=Cucumis melo OX=3656 GN=LOC103488684 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.9e-09
Identity = 35/46 (76.09%), Postives = 40/46 (86.96%), Query Frame = 0

Query: 53 ISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVEL 99
          +  +LFSF AIPNVR KGRA V VA+ILNHLQR+EPVNSNDV+VEL
Sbjct: 28 LPNHLFSFGAIPNVRAKGRALVRVADILNHLQRKEPVNSNDVHVEL 73

BLAST of MELO3C035290.2 vs. TrEMBL
Match: tr|A0A1S4DVT2|A0A1S4DVT2_CUCME (uncharacterized protein LOC103488684 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103488684 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.9e-09
Identity = 35/46 (76.09%), Postives = 40/46 (86.96%), Query Frame = 0

Query: 53 ISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVEL 99
          +  +LFSF AIPNVR KGRA V VA+ILNHLQR+EPVNSNDV+VEL
Sbjct: 28 LPNHLFSFGAIPNVRAKGRALVRVADILNHLQRKEPVNSNDVHVEL 73

BLAST of MELO3C035290.2 vs. TrEMBL
Match: tr|A0A1S3BGU5|A0A1S3BGU5_CUCME (vacuolar protein-sorting-associated protein 33 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489443 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.2e-09
Identity = 41/70 (58.57%), Postives = 48/70 (68.57%), Query Frame = 0

Query: 31  SFLLELSAFGAIAEPSTKSLGIISTYL----FSFEAIPNVRTKGRASVHVANILNHLQRE 90
           SF L+ S    + +  T SL  I+  +    FSF AIPNVR KGRASV VA+ILNHLQ E
Sbjct: 152 SFELDRSNKEYLVDGDTSSLWHIAKAIHKLEFSFGAIPNVRAKGRASVRVADILNHLQTE 211

Query: 91  EPVNSNDVNV 97
           EPVNSNDVN+
Sbjct: 212 EPVNSNDVNM 221

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_016902108.14.1e-48100.00PREDICTED: vacuolar protein-sorting-associated protein 33 homolog isoform X1 [Cu... [more]
XP_008457513.11.2e-36100.00PREDICTED: vacuolar protein-sorting-associated protein 33 homolog isoform X2 [Cu... [more]
XP_008445756.12.9e-0976.09PREDICTED: uncharacterized protein LOC103488684 isoform X7 [Cucumis melo][more]
XP_016900092.12.9e-0976.09PREDICTED: uncharacterized protein LOC103488684 isoform X3 [Cucumis melo][more]
XP_008446838.11.1e-0858.57PREDICTED: vacuolar protein-sorting-associated protein 33 homolog isoform X1 [Cu... [more]
Match NameE-valueIdentityDescription
AT3G54860.21.7e-0850.00Sec1/munc18-like (SM) proteins superfamily[more]
Match NameE-valueIdentityDescription
sp|Q94KJ7|VPS33_ARATH3.1e-0750.00Vacuolar protein-sorting-associated protein 33 homolog OS=Arabidopsis thaliana O... [more]
Match NameE-valueIdentityDescription
tr|A0A1S4E1K7|A0A1S4E1K7_CUCME2.7e-48100.00vacuolar protein-sorting-associated protein 33 homolog isoform X1 OS=Cucumis mel... [more]
tr|A0A1S3C5U0|A0A1S3C5U0_CUCME8.1e-37100.00vacuolar protein-sorting-associated protein 33 homolog isoform X2 OS=Cucumis mel... [more]
tr|A0A1S3BE53|A0A1S3BE53_CUCME1.9e-0976.09uncharacterized protein LOC103488684 isoform X7 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S4DVT2|A0A1S4DVT2_CUCME1.9e-0976.09uncharacterized protein LOC103488684 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3BGU5|A0A1S3BGU5_CUCME7.2e-0958.57vacuolar protein-sorting-associated protein 33 homolog isoform X1 OS=Cucumis mel... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006904 vesicle docking involved in exocytosis
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0016491 oxidoreductase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035290.2.1MELO3C035290.2.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None