MELO3C035262.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C035262.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionATP synthase subunit alpha
Locationchr12 : 866233 .. 866593 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGAATTTGTCAACGGTGACAAAAGAAATAGCCTTAAATCTTGAGAATGAGAATATAGGGATTGTTGTCTTTGGTAGTGATATCACTATTAAAGAAGGAGATCTTGTCAAGCGCATTGGATCAATTATGGATATTTCAGCAAGAAAGGTTATGCTCGAGCGTATGGTCGGTGCCTTGGAAGCACCCATTGATGGAAGAGGGGCTTTCAACGATCACGAGTGAAGACGTATCAAAGTGAAAGCCCTTAGGATAATTGAAGGCAAATAAGTGTACGAGCCTATGAAAACAGGGTTAAAAACGGTGGATAGCCTAGTTCCTATAGGTAGGGGTCGACGAGAATTGATAATCAAGGAGTAA

mRNA sequence

ATGGTAGAATTTGTCAACGGTGACAAAAGAAATAGCCTTAAATCTTGAGAATGAGAATATAGGGATTGTTGTCTTTGGTAGTGATATCACTATTAAAGAAGGAGATCTTGTCAAGCGCATTGGATCAATTATGGATATTTCAGCAAGAAAGGTTATGCTCGAGCGTATGGTCGGTGCCTTGGAAGCACCCATTGATGGAAGAGGGGCTTTCAACGATCACGAGTGAAGACGTATCAAAGTGAAAGCCCTTAGGATAATTGAAGGCAAATAAGTGTACGAGCCTATGAAAACAGGGTTAAAAACGGTGGATAGCCTAGTTCCTATAGGTAGGGGTCGACGAGAATTGATAATCAAGGAGTAA

Coding sequence (CDS)

ATGGATATTTCAGCAAGAAAGGTTATGCTCGAGCGTATGGTCGGTGCCTTGGAAGCACCCATTGATGGAAGAGGGGCTTTCAACGATCACGAGTGA

Protein sequence

MDISARKVMLERMVGALEAPIDGRGAFNDHE
Homology
[Close]
BLAST of MELO3C035262.2 vs. TAIR10
Match: AT2G07698.1 (ATPase, F1 complex, alpha subunit protein)

HSP 1 Score: 40.4 bits (93), Expect = 2.3e-04
Identity = 17/31 (54.84%), Postives = 23/31 (74.19%), Query Frame = 0 

Query: 1   MDISARKVMLERMVGALEAPIDGRGAFNDHE 32
           +D+ A K ML R+V A+  PIDG+GA +DHE
Sbjct: 367 VDVPAGKAMLGRVVDAMGVPIDGKGALSDHE 397

[Close]
BLAST of MELO3C035262.2 vs. TAIR10
Match: ATMG01190.1 (ATP synthase subunit 1)

HSP 1 Score: 40.4 bits (93), Expect = 2.3e-04
Identity = 17/31 (54.84%), Postives = 23/31 (74.19%), Query Frame = 0 

Query: 1   MDISARKVMLERMVGALEAPIDGRGAFNDHE 32
           +D+ A K ML R+V A+  PIDG+GA +DHE
Sbjct: 97  VDVPAGKAMLGRVVDAMGVPIDGKGALSDHE 127

The following BLAST results are available for this feature:
BLAST of MELO3C035262.2 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C035262.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G07698.12.3e-0454.84ATPase, F1 complex, alpha subunit protein[more]
ATMG01190.12.3e-0454.84ATP synthase subunit 1[more]
BLAST of MELO3C035262.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C035262.2 vs. TrEMBL
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006754 ATP biosynthetic process
biological_process GO:0046034 ATP metabolic process
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0006811 ion transport
biological_process GO:0015992 proton transport
biological_process GO:0006810 transport
cellular_component GO:0005739 mitochondrion
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function GO:0032559 adenyl ribonucleotide binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035262.2.1MELO3C035262.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C035262.2Watermelon (97103) v2medwmbB142
MELO3C035262.2Watermelon (97103) v2medwmbB136
MELO3C035262.2Wax gourdmedwgoB164
MELO3C035262.2Cucumber (Gy14) v2cgybmedB021
MELO3C035262.2Cucumber (Gy14) v1cgymedB240
MELO3C035262.2Cucumber (Gy14) v1cgymedB307
MELO3C035262.2Cucurbita maxima (Rimu)cmamedB215
MELO3C035262.2Cucurbita maxima (Rimu)cmamedB451
MELO3C035262.2Cucurbita maxima (Rimu)cmamedB751
MELO3C035262.2Cucurbita maxima (Rimu)cmamedB850
MELO3C035262.2Cucurbita moschata (Rifu)cmomedB203
MELO3C035262.2Cucurbita moschata (Rifu)cmomedB439
MELO3C035262.2Cucurbita moschata (Rifu)cmomedB748
MELO3C035262.2Cucurbita moschata (Rifu)cmomedB844
MELO3C035262.2Cucurbita pepo (Zucchini)cpemedB453
MELO3C035262.2Cucurbita pepo (Zucchini)cpemedB561
MELO3C035262.2Cucurbita pepo (Zucchini)cpemedB589
MELO3C035262.2Cucumber (Chinese Long) v2cumedB023
MELO3C035262.2Cucurbita pepo (Zucchini)cpemedB935
MELO3C035262.2Wild cucumber (PI 183967)cpimedB024
MELO3C035262.2Wild cucumber (PI 183967)cpimedB173
MELO3C035262.2Cucumber (Chinese Long) v2cumedB172
MELO3C035262.2Melon (DHL92) v3.6.1medmedB070
MELO3C035262.2Bottle gourd (USVL1VR-Ls)lsimedB183
MELO3C035262.2Watermelon (Charleston Gray)medwcgB123
MELO3C035262.2Watermelon (Charleston Gray)medwcgB141
MELO3C035262.2Watermelon (97103) v1medwmB142
MELO3C035262.2Watermelon (97103) v1medwmB143
MELO3C035262.2Silver-seed gourdcarmedB0160
MELO3C035262.2Silver-seed gourdcarmedB0392
MELO3C035262.2Silver-seed gourdcarmedB0451
MELO3C035262.2Silver-seed gourdcarmedB0674
MELO3C035262.2Cucumber (Chinese Long) v3cucmedB023