MELO3C035260.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C035260.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionRibosomal protein L5
Locationchr12 : 863012 .. 863342 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAAGGGGTTCGACAGGAAAGTCCTTTCGATCCAATCCATTCTTGGAGTCAAATAAAGACAAAGGATATGTCAGTGACCTAGCACGAGAAAGCACTCTCCGAGGGCATGAAATGTCTAATTTTTCTTTCAAAATCATTATAGGAATAGTAATGTCTTTCTTAAATTCTCCGGCCGAAATACGGGAAAACTCCATGAAATTCTCGATGGAAACGGAGTTTTTCGAATTCTTCCCGGAACTGGCAGATCATTTCGAGATCTTCTCTAAGACTCTAGGGTTCAATGTGACTATTGTCACTTCGGCCAAGACACAAGATGAGACTTTACCACCGT

mRNA sequence

ACAAGGGGTTCGACAGGAAAGTCCTTTCGATCCAATCCATTCTTGGAGTCAAATAAAGACAAAGGATATGTCAGTGACCTAGCACGAGAAAGCACTCTCCGAGGGCATGAAATGTCTAATTTTTCTTTCAAAATCATTATAGGAATAGTAATGTCTTTCTTAAATTCTCCGGCCGAAATACGGGAAAACTCCATGAAATTCTCGATGGAAACGGAGTTTTTCGAATTCTTCCCGGAACTGGCAGATCATTTCGAGATCTTCTCTAAGACTCTAGGGTTCAATGTGACTATTGTCACTTCGGCCAAGACACAAGATGAGACTTTACCACCGT

Coding sequence (CDS)

ACAAGGGGTTCGACAGGAAAGTCCTTTCGATCCAATCCATTCTTGGAGTCAAATAAAGACAAAGGATATGTCAGTGACCTAGCACGAGAAAGCACTCTCCGAGGGCATGAAATGTCTAATTTTTCTTTCAAAATCATTATAGGAATAGTAATGTCTTTCTTAAATTCTCCGGCCGAAATACGGGAAAACTCCATGAAATTCTCGATGGAAACGGAGTTTTTCGAATTCTTCCCGGAACTGGCAGATCATTTCGAGATCTTCTCTAAGACTCTAGGGTTCAATGTGACTATTGTCACTTCGGCCAAGACACAAGATGAGACTTTACCACCG

Protein sequence

TRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP
Homology
[Close]
BLAST of MELO3C035260.2 vs. NCBI nr
Match: AEN56134.1 (ribosomal protein L5 (mitochondrion) [Cucumis melo subsp. melo])

HSP 1 Score: 217.6 bits (553), Expect = 2.1e-53
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   TRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEI 60
           TRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEI
Sbjct: 67  TRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEI 126

Query: 61  RENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP 111
           RENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP
Sbjct: 127 RENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP 176

[Close]
BLAST of MELO3C035260.2 vs. NCBI nr
Match: YP_004849341.1 (ribosomal protein L5 (mitochondrion) [Cucumis sativus] >ADZ10768.1 ribosomal protein L5 (mitochondrion) [Cucumis sativus])

HSP 1 Score: 196.1 bits (497), Expect = 6.5e-47
Identity = 98/110 (89.09%), Postives = 104/110 (94.55%), Query Frame = 0 

Query: 1   TRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEI 60
           TRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGH M +F FKIIIGIV+SFLNSP EI
Sbjct: 67  TRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHSMFHFFFKIIIGIVLSFLNSPGEI 126

Query: 61  RENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP 111
           R+NS++F METEFFEFFPELADHFEIFS TLGF+VTIVTSAKTQDETLPP
Sbjct: 127 RKNSIQFPMETEFFEFFPELADHFEIFSNTLGFHVTIVTSAKTQDETLPP 176

[Close]
BLAST of MELO3C035260.2 vs. NCBI nr
Match: AAP33159.1 (ribosomal protein L5 (mitochondrion) [Cucumis sativus] >AAP33161.1 ribosomal protein L5 (mitochondrion) [Cucumis sativus] >AAP33162.1 ribosomal protein L5 (mitochondrion) [Cucumis sativus])

HSP 1 Score: 190.7 bits (483), Expect = 2.7e-45
Identity = 96/108 (88.89%), Postives = 102/108 (94.44%), Query Frame = 0 

Query: 1   TRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEI 60
           TRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGH M +F FKIIIGIV+SFLNSP EI
Sbjct: 67  TRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHSMFHFFFKIIIGIVLSFLNSPGEI 126

Query: 61  RENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETL 109
           R+NS++F METEFFEFFPELADHFEIFS TLGF+VTIVTSAKTQDETL
Sbjct: 127 RKNSIQFPMETEFFEFFPELADHFEIFSNTLGFHVTIVTSAKTQDETL 174

[Close]
BLAST of MELO3C035260.2 vs. NCBI nr
Match: AFY03535.1 (ribosomal protein L5, partial (mitochondrion) [Lagenaria siceraria])

HSP 1 Score: 171.0 bits (432), Expect = 2.2e-39
Identity = 89/109 (81.65%), Postives = 94/109 (86.24%), Query Frame = 0 

Query: 2   RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEIR 61
           RGSTGKSFRSNPFLESNKDKGYVSDLAR+STLRGH MSNFS +  I  VMS L+SP EIR
Sbjct: 16  RGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFSVR--ISTVMSLLDSPVEIR 75

Query: 62  ENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP 111
           ENS++FSMETEF EF PEL DHFEIF   LGFNVTIVTSA TQDETLPP
Sbjct: 76  ENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPP 122

[Close]
BLAST of MELO3C035260.2 vs. NCBI nr
Match: XP_023512239.1 (uncharacterized protein LOC111777027 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 168.7 bits (426), Expect = 1.1e-38
Identity = 87/109 (79.82%), Postives = 93/109 (85.32%), Query Frame = 0 

Query: 2   RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEIR 61
           RGSTGKSFRSNPFLESNKDKGYVSDLAR+STLRGH MSNF+ +  I  VMS L+SP EIR
Sbjct: 58  RGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFAVR--ISTVMSLLDSPVEIR 117

Query: 62  ENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP 111
           ENSM+FSMETEF  F PEL DHFEIF   +GFNVTIVTSA TQDETLPP
Sbjct: 118 ENSMQFSMETEFCSFSPELEDHFEIFEHIIGFNVTIVTSANTQDETLPP 164

[Close]
BLAST of MELO3C035260.2 vs. TAIR10
Match: AT2G07725.1 (Ribosomal L5P family protein)

HSP 1 Score: 159.1 bits (401), Expect = 1.6e-39
Identity = 83/108 (76.85%), Postives = 90/108 (83.33%), Query Frame = 0 

Query: 2   RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEIR 61
           RGSTGKSFRSNPFL SNKDKGYVSDLAR+STLRGH MSNFS +  I  VMS L+ P EIR
Sbjct: 66  RGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFSVR--ISTVMSLLDFPVEIR 125

Query: 62  ENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLP 110
           +NS++FSMETEF EF PEL DHFEIF    GFNVTI+TSA TQDETLP
Sbjct: 126 KNSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIITSANTQDETLP 171

[Close]
BLAST of MELO3C035260.2 vs. TAIR10
Match: ATMG00210.1 (ribosomal protein L5)

HSP 1 Score: 159.1 bits (401), Expect = 1.6e-39
Identity = 83/108 (76.85%), Postives = 90/108 (83.33%), Query Frame = 0 

Query: 2   RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEIR 61
           RGSTGKSFRSNPFL SNKDKGYVSDLAR+STLRGH MSNFS +  I  VMS L+ P EIR
Sbjct: 66  RGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFSVR--ISTVMSLLDFPVEIR 125

Query: 62  ENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLP 110
           +NS++FSMETEF EF PEL DHFEIF    GFNVTI+TSA TQDETLP
Sbjct: 126 KNSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIITSANTQDETLP 171

[Close]
BLAST of MELO3C035260.2 vs. Swiss-Prot
Match: sp|P49388|RM05_BRANA (60S ribosomal protein L5, mitochondrial OS=Brassica napus OX=3708 GN=RPL5 PE=3 SV=2)

HSP 1 Score: 158.3 bits (399), Expect = 4.9e-38
Identity = 83/108 (76.85%), Postives = 90/108 (83.33%), Query Frame = 0 

Query: 2   RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEIR 61
           RGSTGKSFRSNPFL SNKDKGYVSDLAR+STLRGH MSNFS +  I  VMS L+ P EIR
Sbjct: 66  RGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFSVR--ISTVMSLLDFPVEIR 125

Query: 62  ENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLP 110
           +NS++FSMETEF EF P+L DHFEIF    GFNVTIVTSA TQDETLP
Sbjct: 126 KNSIQFSMETEFCEFAPQLQDHFEIFEHIRGFNVTIVTSANTQDETLP 171

[Close]
BLAST of MELO3C035260.2 vs. Swiss-Prot
Match: sp|P42793|RM05_ARATH (60S ribosomal protein L5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL5 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 7.1e-37
Identity = 81/107 (75.70%), Postives = 89/107 (83.18%), Query Frame = 0 

Query: 2   RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEIR 61
           RGSTGKSFRSNPFL SNKDKGYVSDLAR+STLRGH MSNF  +I+   VMS L+ P EIR
Sbjct: 66  RGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFLVRIL--TVMSLLDFPVEIR 125

Query: 62  ENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETL 109
           +NS++FSMETEF EF PEL DHFEIF    GFNVTI+TSA TQDETL
Sbjct: 126 KNSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIITSANTQDETL 170

[Close]
BLAST of MELO3C035260.2 vs. Swiss-Prot
Match: sp|Q05492|RM05_OENBE (60S ribosomal protein L5, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPL5 PE=2 SV=2)

HSP 1 Score: 152.5 bits (384), Expect = 2.7e-36
Identity = 82/107 (76.64%), Postives = 88/107 (82.24%), Query Frame = 0 

Query: 2   RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEIR 61
           RGSTGKSFRSNPFLESNKDKGYVSDLAR+S LRGH MSNF  +I+   VMS L+S  EIR
Sbjct: 68  RGSTGKSFRSNPFLESNKDKGYVSDLARQSILRGHGMSNFLVRIL--TVMSLLDSRVEIR 127

Query: 62  ENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETL 109
           ENS++FSMETEF EF PEL DHFEIF     FNVTIVTSA TQDETL
Sbjct: 128 ENSIQFSMETEFCEFSPELEDHFEIFEHIRRFNVTIVTSANTQDETL 172

[Close]
BLAST of MELO3C035260.2 vs. Swiss-Prot
Match: sp|P51409|RM05_SOLTU (60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum OX=4113 GN=RPL5 PE=2 SV=2)

HSP 1 Score: 146.7 bits (369), Expect = 1.5e-34
Identity = 81/108 (75.00%), Postives = 87/108 (80.56%), Query Frame = 0 

Query: 2   RGSTGKSFRSNPFLESNKD-KGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEI 61
           R STGKSFRSNPFL SNKD KGYVSDLAR+STLRGH MS+F  +  I  VMS L+SP EI
Sbjct: 66  RASTGKSFRSNPFLGSNKDKKGYVSDLARQSTLRGHGMSHFLVR--ISTVMSLLDSPLEI 125

Query: 62  RENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETL 109
           RE S++FSMETEF EF PEL DHFEIF    GFNVTIVTSA TQDETL
Sbjct: 126 RERSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIVTSANTQDETL 171

[Close]
BLAST of MELO3C035260.2 vs. Swiss-Prot
Match: sp|P26860|RM05_MARPO (60S ribosomal protein L5, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL5 PE=3 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 2.0e-23
Identity = 62/111 (55.86%), Postives = 79/111 (71.17%), Query Frame = 0 

Query: 1   TRGSTGKSFRSNPFL---ESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSP 60
           +RGSTGKSFR N F+   ES +D GYV+ LAR STLRGH M NF  K++   ++SF + P
Sbjct: 70  SRGSTGKSFRFNKFVLNQESKRDTGYVTYLAR-STLRGHIMYNFLEKLV--TIISFYDYP 129

Query: 61  AEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETL 109
            +I++NS++ SM T     FPE+ DHFEIF    GF+VTIVTSA TQDET+
Sbjct: 130 VKIQKNSIQLSMATSLLRLFPEIQDHFEIFEHIRGFDVTIVTSANTQDETV 177

[Close]
BLAST of MELO3C035260.2 vs. TrEMBL
Match: tr|G3EU44|G3EU44_CUCME (Ribosomal protein L5 OS=Cucumis melo subsp. melo OX=412675 GN=rpl5 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.4e-53
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   TRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEI 60
           TRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEI
Sbjct: 67  TRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEI 126

Query: 61  RENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP 111
           RENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP
Sbjct: 127 RENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP 176

[Close]
BLAST of MELO3C035260.2 vs. TrEMBL
Match: tr|G3EIZ3|G3EIZ3_CUCSA (Ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=rpl5 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 4.3e-47
Identity = 98/110 (89.09%), Postives = 104/110 (94.55%), Query Frame = 0 

Query: 1   TRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEI 60
           TRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGH M +F FKIIIGIV+SFLNSP EI
Sbjct: 67  TRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHSMFHFFFKIIIGIVLSFLNSPGEI 126

Query: 61  RENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP 111
           R+NS++F METEFFEFFPELADHFEIFS TLGF+VTIVTSAKTQDETLPP
Sbjct: 127 RKNSIQFPMETEFFEFFPELADHFEIFSNTLGFHVTIVTSAKTQDETLPP 176

[Close]
BLAST of MELO3C035260.2 vs. TrEMBL
Match: tr|Q7Y6H0|Q7Y6H0_CUCSA (Ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=rpl5 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-45
Identity = 96/108 (88.89%), Postives = 102/108 (94.44%), Query Frame = 0 

Query: 1   TRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEI 60
           TRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGH M +F FKIIIGIV+SFLNSP EI
Sbjct: 67  TRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHSMFHFFFKIIIGIVLSFLNSPGEI 126

Query: 61  RENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETL 109
           R+NS++F METEFFEFFPELADHFEIFS TLGF+VTIVTSAKTQDETL
Sbjct: 127 RKNSIQFPMETEFFEFFPELADHFEIFSNTLGFHVTIVTSAKTQDETL 174

[Close]
BLAST of MELO3C035260.2 vs. TrEMBL
Match: tr|K7Z325|K7Z325_LAGSI (Ribosomal protein L5 (Fragment) OS=Lagenaria siceraria OX=3668 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.5e-39
Identity = 89/109 (81.65%), Postives = 94/109 (86.24%), Query Frame = 0 

Query: 2   RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEIR 61
           RGSTGKSFRSNPFLESNKDKGYVSDLAR+STLRGH MSNFS +  I  VMS L+SP EIR
Sbjct: 16  RGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFSVR--ISTVMSLLDSPVEIR 75

Query: 62  ENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP 111
           ENS++FSMETEF EF PEL DHFEIF   LGFNVTIVTSA TQDETLPP
Sbjct: 76  ENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPP 122

[Close]
BLAST of MELO3C035260.2 vs. TrEMBL
Match: tr|A0A288W768|A0A288W768_BUPFA (Ribosomal protein L5 OS=Bupleurum falcatum OX=46367 GN=rpl5 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.8e-38
Identity = 87/109 (79.82%), Postives = 93/109 (85.32%), Query Frame = 0 

Query: 2   RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEIR 61
           RGSTGKSFRSNPFL SNKDKGYVSDLAR+STLRGH MSNFS +  I  VMS L+SP EIR
Sbjct: 66  RGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFSVR--ISTVMSLLDSPVEIR 125

Query: 62  ENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP 111
           ENS++FSMETEF EF PEL DHFEIF +  GFNVTIVTSA TQDETLPP
Sbjct: 126 ENSIQFSMETEFCEFSPELEDHFEIFEQIRGFNVTIVTSANTQDETLPP 172

The following BLAST results are available for this feature:
BLAST of MELO3C035260.2 vs. NCBI nr
Match NameE-valueIdentityDescription
AEN56134.12.1e-53100.00ribosomal protein L5 (mitochondrion) [Cucumis melo subsp. melo][more]
YP_004849341.16.5e-4789.09ribosomal protein L5 (mitochondrion) [Cucumis sativus] >ADZ10768.1 ribosomal pro... [more]
AAP33159.12.7e-4588.89ribosomal protein L5 (mitochondrion) [Cucumis sativus] >AAP33161.1 ribosomal pro... [more]
AFY03535.12.2e-3981.65ribosomal protein L5, partial (mitochondrion) [Lagenaria siceraria][more]
XP_023512239.11.1e-3879.82uncharacterized protein LOC111777027 [Cucurbita pepo subsp. pepo][more]
BLAST of MELO3C035260.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G07725.11.6e-3976.85Ribosomal L5P family protein[more]
ATMG00210.11.6e-3976.85ribosomal protein L5[more]
BLAST of MELO3C035260.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P49388|RM05_BRANA4.9e-3876.8560S ribosomal protein L5, mitochondrial OS=Brassica napus OX=3708 GN=RPL5 PE=3 S... [more]
sp|P42793|RM05_ARATH7.1e-3775.7060S ribosomal protein L5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL5 ... [more]
sp|Q05492|RM05_OENBE2.7e-3676.6460S ribosomal protein L5, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPL5 ... [more]
sp|P51409|RM05_SOLTU1.5e-3475.0060S ribosomal protein L5, mitochondrial OS=Solanum tuberosum OX=4113 GN=RPL5 PE=... [more]
sp|P26860|RM05_MARPO2.0e-2355.8660S ribosomal protein L5, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL5... [more]
BLAST of MELO3C035260.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|G3EU44|G3EU44_CUCME1.4e-53100.00Ribosomal protein L5 OS=Cucumis melo subsp. melo OX=412675 GN=rpl5 PE=4 SV=1[more]
tr|G3EIZ3|G3EIZ3_CUCSA4.3e-4789.09Ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=rpl5 PE=4 SV=1[more]
tr|Q7Y6H0|Q7Y6H0_CUCSA1.8e-4588.89Ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=rpl5 PE=4 SV=1[more]
tr|K7Z325|K7Z325_LAGSI1.5e-3981.65Ribosomal protein L5 (Fragment) OS=Lagenaria siceraria OX=3668 PE=4 SV=1[more]
tr|A0A288W768|A0A288W768_BUPFA2.8e-3879.82Ribosomal protein L5 OS=Bupleurum falcatum OX=46367 GN=rpl5 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR002132Ribosomal_L5
IPR022803Ribosomal_L5_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035260.2.1MELO3C035260.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022803Ribosomal protein L5 domain superfamilyGENE3DG3DSA:3.30.1440.10coord: 24..109
e-value: 3.6E-9
score: 38.4
IPR022803Ribosomal protein L5 domain superfamilySUPERFAMILYSSF55282RL5-likecoord: 28..107
IPR002132Ribosomal protein L5PANTHERPTHR1199460S RIBOSOMAL PROTEIN L11-RELATEDcoord: 2..110
NoneNo IPR availablePANTHERPTHR11994:SF1160S RIBOSOMAL PROTEIN L5, MITOCHONDRIALcoord: 2..110

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C035260.2Cucumber (Gy14) v2cgybmedB021
MELO3C035260.2Cucumber (Gy14) v1cgymedB240
MELO3C035260.2Cucumber (Gy14) v1cgymedB307
MELO3C035260.2Cucurbita maxima (Rimu)cmamedB215
MELO3C035260.2Cucurbita maxima (Rimu)cmamedB451
MELO3C035260.2Cucurbita maxima (Rimu)cmamedB751
MELO3C035260.2Cucurbita maxima (Rimu)cmamedB850
MELO3C035260.2Cucurbita moschata (Rifu)cmomedB203
MELO3C035260.2Cucurbita moschata (Rifu)cmomedB439
MELO3C035260.2Cucurbita moschata (Rifu)cmomedB748
MELO3C035260.2Cucurbita moschata (Rifu)cmomedB844
MELO3C035260.2Cucurbita pepo (Zucchini)cpemedB453
MELO3C035260.2Cucurbita pepo (Zucchini)cpemedB561
MELO3C035260.2Cucurbita pepo (Zucchini)cpemedB589
MELO3C035260.2Cucumber (Chinese Long) v2cumedB023
MELO3C035260.2Cucurbita pepo (Zucchini)cpemedB935
MELO3C035260.2Wild cucumber (PI 183967)cpimedB024
MELO3C035260.2Wild cucumber (PI 183967)cpimedB173
MELO3C035260.2Cucumber (Chinese Long) v2cumedB172
MELO3C035260.2Melon (DHL92) v3.6.1medmedB070
MELO3C035260.2Bottle gourd (USVL1VR-Ls)lsimedB183
MELO3C035260.2Watermelon (Charleston Gray)medwcgB123
MELO3C035260.2Watermelon (Charleston Gray)medwcgB141
MELO3C035260.2Watermelon (97103) v1medwmB142
MELO3C035260.2Watermelon (97103) v1medwmB143
MELO3C035260.2Silver-seed gourdcarmedB0160
MELO3C035260.2Silver-seed gourdcarmedB0392
MELO3C035260.2Silver-seed gourdcarmedB0451
MELO3C035260.2Silver-seed gourdcarmedB0674
MELO3C035260.2Cucumber (Chinese Long) v3cucmedB023
MELO3C035260.2Watermelon (97103) v2medwmbB142
MELO3C035260.2Watermelon (97103) v2medwmbB136
MELO3C035260.2Wax gourdmedwgoB164