MELO3C035252.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C035252.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionEnvelope-like protein
Locationchr12 : 245721 .. 246064 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGGTGTGAGAATAAGAGGTCGTCGTTTCAAAAGTACTGTACCGCAGAGACCCTATCAGCTTCCGTCAGAAAAATTTTAGCCACATGTCTCTGAAAGCTCTCATATGCCTGTGCAAGAAGAAGTTGGTACTAGAAGTGTTGTGAAAGATGCTGAAAATGCTCTTAGTGCCTCTGAGACTCATATTTCCGACATGGATTCCGATGACCTAGATAATATTCCACTGACCAGACTATTGAAGAAGAGTTCTATTCTTGATGTTGCGATTGAAAAATCTACTGATCCTATTTTATCACTTCATTCTCAAGAAAGCTCGTCTTCTTATGATTTTTTAAAGTTGAA

mRNA sequence

ATGCATGGTGTGAGAATAAGAGGTCGTCGTTTCAAAAGTACTGTACCGCAGAGACCCTATCAGCTTCCGTCAGAAAAATTTTAGCCACATGTCTCTGAAAGCTCTCATATGCCTGTGCAAGAAGAAGTTGGTACTAGAAGTGTTGTGAAAGATGCTGAAAATGCTCTTAGTGCCTCTGAGACTCATATTTCCGACATGGATTCCGATGACCTAGATAATATTCCACTGACCAGACTATTGAAGAAGAGTTCTATTCTTGATGTTGCGATTGAAAAATCTACTGATCCTATTTTATCACTTCATTCTCAAGAAAGCTCGTCTTCTTATGATTTTTTAAAGTTGAA

Coding sequence (CDS)

ATGCCTGTGCAAGAAGAAGTTGGTACTAGAAGTGTTGTGAAAGATGCTGAAAATGCTCTTAGTGCCTCTGAGACTCATATTTCCGACATGGATTCCGATGACCTAGATAATATTCCACTGACCAGACTATTGAAGAAGAGTTCTATTCTTGATGTTGCGATTGAAAAATCTACTGATCCTATTTTATCACTTCATTCTCAAGAAAGCTCGTCTTCTTATGATTTTTTAAAGTTG

Protein sequence

MPVQEEVGTRSVVKDAENALSASETHISDMDSDDLDNIPLTRLLKKSSILDVAIEKSTDPILSLHSQESSSSYDFLKL
Homology
[Close]
BLAST of MELO3C035252.2 vs. NCBI nr
Match: XP_008442287.1 (PREDICTED: uncharacterized protein LOC103486195 [Cucumis melo])

HSP 1 Score: 90.9 bits (224), Expect = 2.1e-15
Identity = 48/74 (64.86%), Postives = 58/74 (78.38%), Query Frame = 0 

Query: 1   MPVQEEVGTRSVVKDAENALSASETHISDMDSDDLDNIPLTRLLKKSSILDVAIEKSTDP 60
           +PV EE+  +S VK AENA S SETH+S+MD DDLD+IPL RLLKKS   +VA+ K TDP
Sbjct: 29  VPVHEEIVVKSAVKSAENAPSVSETHVSNMDLDDLDDIPLARLLKKSYASEVALAKPTDP 88

Query: 61  ILSLHSQESSSSYD 75
           I+S HSQ+SSSS D
Sbjct: 89  IISAHSQKSSSSED 102

[Close]
BLAST of MELO3C035252.2 vs. NCBI nr
Match: XP_008437685.1 (PREDICTED: uncharacterized protein LOC103483026 [Cucumis melo])

HSP 1 Score: 69.3 bits (168), Expect = 6.5e-09
Identity = 37/61 (60.66%), Postives = 48/61 (78.69%), Query Frame = 0 

Query: 12 VVKDAENALSASETHISDMDSDDLDNIPLTRLLKKSSILDVAIEKSTDPILSLHSQESSS 71
          ++KDAE A + SE H+SD+DSDDLD++PL RL+KK +  DV  EK TD +LS +SQESSS
Sbjct: 1  MLKDAETAPAVSEAHLSDIDSDDLDDVPLARLVKKVTTPDVVPEKFTDHVLSDYSQESSS 60

Query: 72 S 73
          S
Sbjct: 61 S 61

[Close]
BLAST of MELO3C035252.2 vs. NCBI nr
Match: XP_008456819.1 (PREDICTED: uncharacterized protein LOC103496657 [Cucumis melo])

HSP 1 Score: 68.6 bits (166), Expect = 1.1e-08
Identity = 38/70 (54.29%), Postives = 49/70 (70.00%), Query Frame = 0 

Query: 3   VQEEVGTRSVVKDAENALSASETHISDMDSDDLDNIPLTRLLKKSSILDVAIEKSTDPIL 62
           V EE+ + + +KD E AL  SE H+ DMDSDDLD++P  RL+KK +  DV  EK  + +L
Sbjct: 35  VHEEIVSGNAMKDVETALVVSEAHLFDMDSDDLDDVPPARLVKKVTAPDVVPEKFANHVL 94

Query: 63  SLHSQESSSS 73
           S HSQESSSS
Sbjct: 95  SDHSQESSSS 104

[Close]
BLAST of MELO3C035252.2 vs. NCBI nr
Match: XP_008454855.1 (PREDICTED: uncharacterized protein LOC103495162 [Cucumis melo])

HSP 1 Score: 65.5 bits (158), Expect = 9.3e-08
Identity = 37/70 (52.86%), Postives = 50/70 (71.43%), Query Frame = 0 

Query: 3   VQEEVGTRSVVKDAENALSASETHISDMDSDDLDNIPLTRLLKKSSILDVAIEKSTDPIL 62
           + EEV   +V+KDAE A +ASE H+S+MDSDDLD++PL RL+KK +  +   +   D +L
Sbjct: 63  IHEEVVYGNVMKDAETAPAASEAHLSNMDSDDLDDVPLARLVKKVTAPNAVPKNVNDNVL 122

Query: 63  SLHSQESSSS 73
           S  SQESSSS
Sbjct: 123 SDQSQESSSS 132

[Close]
BLAST of MELO3C035252.2 vs. NCBI nr
Match: ADN33761.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 61.2 bits (147), Expect = 1.8e-06
Identity = 34/70 (48.57%), Postives = 50/70 (71.43%), Query Frame = 0 

Query: 3   VQEEVGTRSVVKDAENALSASETHISDMDSDDLDNIPLTRLLKKSSILDVAIEKSTDPIL 62
           V  +V +++   +AE+  SA +TH+ DMDS+DLD++ L RLLKK+ + +VA   S DP +
Sbjct: 40  VPNDVNSQNPTTNAEHEPSAPKTHMYDMDSNDLDDVRLARLLKKTYVPNVAAGNSIDPSV 99

Query: 63  SLHSQESSSS 73
           S HSQESSS+
Sbjct: 100 SSHSQESSST 109

[Close]
BLAST of MELO3C035252.2 vs. TrEMBL
Match: tr|A0A1S3B4V9|A0A1S3B4V9_CUCME (uncharacterized protein LOC103486195 OS=Cucumis melo OX=3656 GN=LOC103486195 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.4e-15
Identity = 48/74 (64.86%), Postives = 58/74 (78.38%), Query Frame = 0 

Query: 1   MPVQEEVGTRSVVKDAENALSASETHISDMDSDDLDNIPLTRLLKKSSILDVAIEKSTDP 60
           +PV EE+  +S VK AENA S SETH+S+MD DDLD+IPL RLLKKS   +VA+ K TDP
Sbjct: 29  VPVHEEIVVKSAVKSAENAPSVSETHVSNMDLDDLDDIPLARLLKKSYASEVALAKPTDP 88

Query: 61  ILSLHSQESSSSYD 75
           I+S HSQ+SSSS D
Sbjct: 89  IISAHSQKSSSSED 102

[Close]
BLAST of MELO3C035252.2 vs. TrEMBL
Match: tr|A0A1S3AV82|A0A1S3AV82_CUCME (uncharacterized protein LOC103483026 OS=Cucumis melo OX=3656 GN=LOC103483026 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.3e-09
Identity = 37/61 (60.66%), Postives = 48/61 (78.69%), Query Frame = 0 

Query: 12 VVKDAENALSASETHISDMDSDDLDNIPLTRLLKKSSILDVAIEKSTDPILSLHSQESSS 71
          ++KDAE A + SE H+SD+DSDDLD++PL RL+KK +  DV  EK TD +LS +SQESSS
Sbjct: 1  MLKDAETAPAVSEAHLSDIDSDDLDDVPLARLVKKVTTPDVVPEKFTDHVLSDYSQESSS 60

Query: 72 S 73
          S
Sbjct: 61 S 61

[Close]
BLAST of MELO3C035252.2 vs. TrEMBL
Match: tr|A0A1S3C4T8|A0A1S3C4T8_CUCME (uncharacterized protein LOC103496657 OS=Cucumis melo OX=3656 GN=LOC103496657 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.3e-09
Identity = 38/70 (54.29%), Postives = 49/70 (70.00%), Query Frame = 0 

Query: 3   VQEEVGTRSVVKDAENALSASETHISDMDSDDLDNIPLTRLLKKSSILDVAIEKSTDPIL 62
           V EE+ + + +KD E AL  SE H+ DMDSDDLD++P  RL+KK +  DV  EK  + +L
Sbjct: 35  VHEEIVSGNAMKDVETALVVSEAHLFDMDSDDLDDVPPARLVKKVTAPDVVPEKFANHVL 94

Query: 63  SLHSQESSSS 73
           S HSQESSSS
Sbjct: 95  SDHSQESSSS 104

[Close]
BLAST of MELO3C035252.2 vs. TrEMBL
Match: tr|A0A1S3BZ31|A0A1S3BZ31_CUCME (uncharacterized protein LOC103495162 OS=Cucumis melo OX=3656 GN=LOC103495162 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 6.2e-08
Identity = 37/70 (52.86%), Postives = 50/70 (71.43%), Query Frame = 0 

Query: 3   VQEEVGTRSVVKDAENALSASETHISDMDSDDLDNIPLTRLLKKSSILDVAIEKSTDPIL 62
           + EEV   +V+KDAE A +ASE H+S+MDSDDLD++PL RL+KK +  +   +   D +L
Sbjct: 63  IHEEVVYGNVMKDAETAPAASEAHLSNMDSDDLDDVPLARLVKKVTAPNAVPKNVNDNVL 122

Query: 63  SLHSQESSSS 73
           S  SQESSSS
Sbjct: 123 SDQSQESSSS 132

[Close]
BLAST of MELO3C035252.2 vs. TrEMBL
Match: tr|E5GBC0|E5GBC0_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-06
Identity = 34/70 (48.57%), Postives = 50/70 (71.43%), Query Frame = 0 

Query: 3   VQEEVGTRSVVKDAENALSASETHISDMDSDDLDNIPLTRLLKKSSILDVAIEKSTDPIL 62
           V  +V +++   +AE+  SA +TH+ DMDS+DLD++ L RLLKK+ + +VA   S DP +
Sbjct: 40  VPNDVNSQNPTTNAEHEPSAPKTHMYDMDSNDLDDVRLARLLKKTYVPNVAAGNSIDPSV 99

Query: 63  SLHSQESSSS 73
           S HSQESSS+
Sbjct: 100 SSHSQESSST 109

The following BLAST results are available for this feature:
BLAST of MELO3C035252.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008442287.12.1e-1564.86PREDICTED: uncharacterized protein LOC103486195 [Cucumis melo][more]
XP_008437685.16.5e-0960.66PREDICTED: uncharacterized protein LOC103483026 [Cucumis melo][more]
XP_008456819.11.1e-0854.29PREDICTED: uncharacterized protein LOC103496657 [Cucumis melo][more]
XP_008454855.19.3e-0852.86PREDICTED: uncharacterized protein LOC103495162 [Cucumis melo][more]
ADN33761.11.8e-0648.57hypothetical protein [Cucumis melo subsp. melo][more]
BLAST of MELO3C035252.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C035252.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C035252.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B4V9|A0A1S3B4V9_CUCME1.4e-1564.86uncharacterized protein LOC103486195 OS=Cucumis melo OX=3656 GN=LOC103486195 PE=... [more]
tr|A0A1S3AV82|A0A1S3AV82_CUCME4.3e-0960.66uncharacterized protein LOC103483026 OS=Cucumis melo OX=3656 GN=LOC103483026 PE=... [more]
tr|A0A1S3C4T8|A0A1S3C4T8_CUCME7.3e-0954.29uncharacterized protein LOC103496657 OS=Cucumis melo OX=3656 GN=LOC103496657 PE=... [more]
tr|A0A1S3BZ31|A0A1S3BZ31_CUCME6.2e-0852.86uncharacterized protein LOC103495162 OS=Cucumis melo OX=3656 GN=LOC103495162 PE=... [more]
tr|E5GBC0|E5GBC0_CUCME1.2e-0648.57Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035252.2.1MELO3C035252.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C035252.2Cucurbita maxima (Rimu)cmamedB215
MELO3C035252.2Cucurbita maxima (Rimu)cmamedB224
MELO3C035252.2Cucurbita maxima (Rimu)cmamedB449
MELO3C035252.2Cucurbita maxima (Rimu)cmamedB451
MELO3C035252.2Cucurbita moschata (Rifu)cmomedB203
MELO3C035252.2Cucurbita moschata (Rifu)cmomedB211
MELO3C035252.2Cucurbita moschata (Rifu)cmomedB437
MELO3C035252.2Cucurbita moschata (Rifu)cmomedB439
MELO3C035252.2Cucurbita pepo (Zucchini)cpemedB558
MELO3C035252.2Cucurbita pepo (Zucchini)cpemedB561
MELO3C035252.2Cucurbita pepo (Zucchini)cpemedB586
MELO3C035252.2Cucurbita pepo (Zucchini)cpemedB590
MELO3C035252.2Bottle gourd (USVL1VR-Ls)lsimedB183
MELO3C035252.2Watermelon (Charleston Gray)medwcgB141
MELO3C035252.2Watermelon (97103) v1medwmB143
MELO3C035252.2Silver-seed gourdcarmedB0343
MELO3C035252.2Silver-seed gourdcarmedB0528
MELO3C035252.2Silver-seed gourdcarmedB0530
MELO3C035252.2Watermelon (97103) v2medwmbB142
MELO3C035252.2Wax gourdmedwgoB164