MELO3C035187.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C035187.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionLOW QUALITY PROTEIN: ras-related protein Rab-2A-like
Locationchr11 : 30219862 .. 30221000 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAAAATCAAAATATGTATTATTGCAGGCCGGACAAGAGGCATTCAAATCAATTACAAGATCTTATTACAGAGGAGCAATCGGTGCACTTTTAGTTTATGATGTTACTAGGTAAGTTCTAATATAAAAGTAAACTGAAATATTATAACTAAATTTGATCATAGATCATCAAGCCTTAGAATAGTTAGGAATAAAAACATCAAAAGTACTAATTTAAATGAAATTTAAATGTCAACCTGAATAATTATTATTGCATTAGGAGAAAGACATTCTCTAACTTGAAGAGTTGGTTGGATGATGTTAGAGAGCTTGCACATCCCGACATATCAATTATGGTGGTAGAAATAAGGTTGATAAAAATGGTCGAAGAGAAGTGACCAAAGAAAAAGAAGAAGGACAACATTTTGCGGAACAAAATGGACTCTGGTTTTTAGAGACATCCGCTAAAACAAGTCAAAATGTCTATGAGGTTAGTTTAATTTGTTTCAAATATTCATGACACTAAATATCTTATATAACAATTTTATATAAAATATAATGACATATCTTTAAAGAAAAAAATCATTAGTATTTAAACTCATACGAAACAGTCGTGTATTTCTTAAGTTTAGTAAATTTATAAACATTCATTTGTTTCTATTAACCATCAAATTTTAAAATTTATACTTTTAATCTTATTTGATATTCGATTCTTATTCGAGGGTTTTAATTTCTACCATTATTTTGAAATAATTTAAATAATTATAAATAGATTAATTACTTATCATATTAATTTATTTTTCTTATTTATTTATTATTTCGTTTAGCTGATCACCAATAGTGTTGTTCTACAGCCTTTCTCAATAATTGCAAATAACATACTTGACAAGATTGAGCTTGGTGTCCTTGATTTATCCAATAAGGTAATTTTTATTTTCATCTTTAATTATTTTCATCTTTAATTAAACATAGATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATAACATGCGATCCAATCAATACATATGGTTTTTATATATAATAGTTAAAATGGATATCACATCTGGAATCAAGGTCGGGCTACGGCCTTGCGTTGAAGGTTCATCCATGGCAACGGAATCAGTAG

mRNA sequence

ATGGTAAAATCAAAATATGTATTATTGCAGGCCGGACAAGAGGCATTCAAATCAATTACAAGATCTTATTACAGAGGAGCAATCGGTGCACTTTTAGTTTATGATGTTACTAGGAGAAAGACATTCTCTAACTTGAAGAGTTGGTTGGATGATGTTAGAGAGCTTGCACATCCCGACATATCAATTATGGTGGTTGATAAAAATGGTCGAAGAGAAGTGACCAAAGAAAAAGAAGAAGGACAACATTTTGCGGAACAAAATGGACTCTGGTTTTTAGAGACATCCGCTAAAACAAGTCAAAATGTCTATGAGCTGATCACCAATAGTGTTGTTCTACAGCCTTTCTCAATAATTGCAAATAACATACTTGACAAGATTGAGCTTGGTGTCCTTGATTTATCCAATAAGTTAAAATGGATATCACATCTGGAATCAAGGTCGGGCTACGGCCTTGCGTTGAAGGTTCATCCATGGCAACGGAATCAGTAG

Coding sequence (CDS)

ATGGTAAAATCAAAATATGTATTATTGCAGGCCGGACAAGAGGCATTCAAATCAATTACAAGATCTTATTACAGAGGAGCAATCGGTGCACTTTTAGTTTATGATGTTACTAGGAGAAAGACATTCTCTAACTTGAAGAGTTGGTTGGATGATGTTAGAGAGCTTGCACATCCCGACATATCAATTATGGTGGTTGATAAAAATGGTCGAAGAGAAGTGACCAAAGAAAAAGAAGAAGGACAACATTTTGCGGAACAAAATGGACTCTGGTTTTTAGAGACATCCGCTAAAACAAGTCAAAATGTCTATGAGCTGATCACCAATAGTGTTGTTCTACAGCCTTTCTCAATAATTGCAAATAACATACTTGACAAGATTGAGCTTGGTGTCCTTGATTTATCCAATAAGTTAAAATGGATATCACATCTGGAATCAAGGTCGGGCTACGGCCTTGCGTTGAAGGTTCATCCATGGCAACGGAATCAGTAG

Protein sequence

MVKSKYVLLQAGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVVDKNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYELITNSVVLQPFSIIANNILDKIELGVLDLSNKLKWISHLESRSGYGLALKVHPWQRNQ
Homology
[Close]
BLAST of MELO3C035187.2 vs. NCBI nr
Match: XP_008458689.1 (PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-2A-like, partial [Cucumis melo])

HSP 1 Score: 221.5 bits (563), Expect = 2.1e-54
Identity = 118/134 (88.06%), Postives = 118/134 (88.06%), Query Frame = 0 

Query: 11  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMV----VD 70
           AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMV    VD
Sbjct: 66  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVVXNKVD 125

Query: 71  KNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYELITNSVVLQPFSIIANNILDKI 130
           KNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYE         PFSIIANNILDKI
Sbjct: 126 KNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYE---------PFSIIANNILDKI 185

Query: 131 ELGVLDLSNKLKWI 141
           ELGVLDLSNK   I
Sbjct: 186 ELGVLDLSNKASGI 190

[Close]
BLAST of MELO3C035187.2 vs. NCBI nr
Match: XP_024978619.1 (ras-related protein RABB1b isoform X2 [Cynara cardunculus var. scolymus])

HSP 1 Score: 131.3 bits (329), Expect = 2.9e-27
Identity = 80/157 (50.96%), Postives = 106/157 (67.52%), Query Frame = 0 

Query: 2   VKSKYVLLQ----AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAH 61
           + S+ V LQ    AGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L  WL+D R+ A+
Sbjct: 50  IDSRPVKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAGWLEDARQHAN 109

Query: 62  PDISIMVV----DKNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYELITNSVVLQ 121
           P+++IM+V    D + RR V+  KEEGQ FA++NGL FLE SA+T+QNV E         
Sbjct: 110 PNMTIMLVGNKSDLSHRRAVS--KEEGQQFAKENGLLFLEASARTAQNVEE--------- 169

Query: 122 PFSIIANNILDKIELGVLDLSNKLKWISHLESRSGYG 151
            F   A  IL+KI+ GV D+SN+   I     + GYG
Sbjct: 170 AFLKTAEKILEKIQEGVFDVSNESSGI-----KVGYG 190

[Close]
BLAST of MELO3C035187.2 vs. NCBI nr
Match: XP_024978618.1 (ras-related protein RABB1b isoform X1 [Cynara cardunculus var. scolymus])

HSP 1 Score: 131.3 bits (329), Expect = 2.9e-27
Identity = 77/144 (53.47%), Postives = 102/144 (70.83%), Query Frame = 0 

Query: 2   VKSKYVLLQ----AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAH 61
           + S+ V LQ    AGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L  WL+D R+ A+
Sbjct: 50  IDSRPVKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAGWLEDARQHAN 109

Query: 62  PDISIMVV----DKNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYELITNSVVLQ 121
           P+++IM+V    D + RR V+  KEEGQ FA++NGL FLE SA+T+QNV E         
Sbjct: 110 PNMTIMLVGNKSDLSHRRAVS--KEEGQQFAKENGLLFLEASARTAQNVEE--------- 169

Query: 122 PFSIIANNILDKIELGVLDLSNKL 138
            F   A  IL+KI+ GV D+SN+L
Sbjct: 170 AFLKTAEKILEKIQEGVFDVSNEL 182

[Close]
BLAST of MELO3C035187.2 vs. NCBI nr
Match: XP_010250984.1 (PREDICTED: ras-related protein RABB1b isoform X2 [Nelumbo nucifera])

HSP 1 Score: 131.0 bits (328), Expect = 3.8e-27
Identity = 74/144 (51.39%), Postives = 101/144 (70.14%), Query Frame = 0 

Query: 11  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV----D 70
           AGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+P+++IM++    D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCD 122

Query: 71  KNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYELITNSVVLQPFSIIANNILDKI 130
            + RR V+  KEEG+ FA++NGL F+E SA+T+QNV E   N+         A  IL KI
Sbjct: 123 LSHRRAVS--KEEGEQFAKENGLIFMEASARTAQNVEEAFINT---------AAKILQKI 182

Query: 131 ELGVLDLSNKLKWISHLESRSGYG 151
           + GV D+SN+   I     + GYG
Sbjct: 183 QEGVFDVSNESSGI-----KVGYG 190

[Close]
BLAST of MELO3C035187.2 vs. NCBI nr
Match: XP_011101827.1 (ras-related protein RABB1b [Sesamum indicum])

HSP 1 Score: 130.6 bits (327), Expect = 4.9e-27
Identity = 76/146 (52.05%), Postives = 100/146 (68.49%), Query Frame = 0 

Query: 11  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV----D 70
           AGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+P+++I++V    D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTILLVGNKSD 122

Query: 71  KNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYELITNSVVLQPFSIIANNILDKI 130
              RR V+  KEEG+ FA++NGL FLE SA+T QNV E  T +         A  IL KI
Sbjct: 123 LAHRRAVS--KEEGEQFAKENGLLFLEASARTGQNVEEAFTKT---------AAKILQKI 182

Query: 131 ELGVLDLSNKLKWISHLESRSGYGLA 153
           + GV D+SN+   I     + GYG A
Sbjct: 183 QEGVFDVSNESSGI-----KVGYGRA 192

[Close]
BLAST of MELO3C035187.2 vs. TAIR10
Match: AT4G17170.1 (RAB GTPase homolog B1C)

HSP 1 Score: 117.5 bits (293), Expect = 7.8e-27
Identity = 71/144 (49.31%), Postives = 96/144 (66.67%), Query Frame = 0 

Query: 11  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV----D 70
           AGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+ +++IM++    D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122

Query: 71  KNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYELITNSVVLQPFSIIANNILDKI 130
              RR V+   EEG+ FA+++GL F+E SAKT+QNV E          F   A  I  KI
Sbjct: 123 LAHRRAVS--TEEGEQFAKEHGLIFMEASAKTAQNVEE---------AFIKTAATIYKKI 182

Query: 131 ELGVLDLSNKLKWISHLESRSGYG 151
           + GV D+SN+   I     + GYG
Sbjct: 183 QDGVFDVSNESYGI-----KVGYG 190

[Close]
BLAST of MELO3C035187.2 vs. TAIR10
Match: AT4G35860.1 (GTP-binding 2)

HSP 1 Score: 117.1 bits (292), Expect = 1.0e-26
Identity = 60/98 (61.22%), Postives = 80/98 (81.63%), Query Frame = 0 

Query: 11  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV----D 70
           AGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+P++SIM++    D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNKCD 122

Query: 71  KNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYE 105
              +R V+  KEEGQ FA+++GL FLE SA+T+QNV E
Sbjct: 123 LAHKRAVS--KEEGQQFAKEHGLLFLEASARTAQNVEE 158

[Close]
BLAST of MELO3C035187.2 vs. TAIR10
Match: AT4G17160.1 (RAB GTPase homolog B1A)

HSP 1 Score: 103.6 bits (257), Expect = 1.2e-22
Identity = 57/130 (43.85%), Postives = 85/130 (65.38%), Query Frame = 0 

Query: 11  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV----D 70
           AGQE+F+S+TRSYYRG  G LLVYD+TRR+TF++L SWL++ R+ A  +++ M++    D
Sbjct: 63  AGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNKCD 122

Query: 71  KNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYELITNSVVLQPFSIIANNILDKI 130
              +R V+   EEG+ FA ++GL F+E SAKT+ NV E    +         A  I  +I
Sbjct: 123 LEDKRTVS--TEEGEQFAREHGLIFMEASAKTAHNVEEAFVET---------AATIYKRI 181

Query: 131 ELGVLDLSNK 137
           + GV+D +N+
Sbjct: 183 QDGVVDEANE 181

[Close]
BLAST of MELO3C035187.2 vs. TAIR10
Match: AT1G73640.1 (RAB GTPase homolog A6A)

HSP 1 Score: 101.3 bits (251), Expect = 5.8e-22
Identity = 52/98 (53.06%), Postives = 71/98 (72.45%), Query Frame = 0 

Query: 11  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV----D 70
           AGQE F++IT SYYRGA+GALL+YD+TRR TF N+K WL ++R+ A+P+  +++V    D
Sbjct: 70  AGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVLVGNKSD 129

Query: 71  KNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYE 105
               REV  E++EG+  AE  GL+FLETSA  + NV E
Sbjct: 130 LRQSREV--EEDEGKTLAESEGLYFLETSALENVNVEE 165

[Close]
BLAST of MELO3C035187.2 vs. TAIR10
Match: AT1G18200.1 (RAB GTPase homolog A6B)

HSP 1 Score: 100.9 bits (250), Expect = 7.6e-22
Identity = 52/104 (50.00%), Postives = 72/104 (69.23%), Query Frame = 0 

Query: 11  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV----D 70
           AGQE F++IT SYYRGA+GALL+YD+TRR TF N++ WL ++R  + P+  +++V    D
Sbjct: 70  AGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVGNKSD 129

Query: 71  KNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYELITNSV 111
               REV  E+EEG+  AE  GL+FLETSA  +QNV E   + +
Sbjct: 130 LGQSREV--EEEEGKTLAESEGLYFLETSALENQNVEEAFLSMI 171

[Close]
BLAST of MELO3C035187.2 vs. Swiss-Prot
Match: sp|Q39570|YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii OX=3055 GN=YPTC4 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.0e-28
Identity = 76/157 (48.41%), Postives = 103/157 (65.61%), Query Frame = 0 

Query: 2   VKSKYVLLQ----AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAH 61
           +  K + LQ    AGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+
Sbjct: 50  IDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN 109

Query: 62  PDISIMVV----DKNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYELITNSVVLQ 121
           P+++IM++    D   RR VT   EEG+ FA+++GL FLETSA+T+ NV E   N+    
Sbjct: 110 PNMTIMLIGNKCDLTHRRAVT--TEEGEQFAKEHGLIFLETSARTAHNVEEAFINT---- 169

Query: 122 PFSIIANNILDKIELGVLDLSNKLKWISHLESRSGYG 151
                A  I  KI+ GV D+SN+   I     + GYG
Sbjct: 170 -----AKEIYKKIQDGVFDVSNESYGI-----KVGYG 190

[Close]
BLAST of MELO3C035187.2 vs. Swiss-Prot
Match: sp|P36863|YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri OX=3067 GN=YPTV4 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.0e-28
Identity = 76/157 (48.41%), Postives = 103/157 (65.61%), Query Frame = 0 

Query: 2   VKSKYVLLQ----AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAH 61
           +  K + LQ    AGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+
Sbjct: 50  IDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN 109

Query: 62  PDISIMVV----DKNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYELITNSVVLQ 121
           P+++IM++    D   RR VT   EEG+ FA+++GL FLETSA+T+ NV E   N+    
Sbjct: 110 PNMTIMLIGNKCDLTHRRAVT--TEEGEQFAKEHGLIFLETSARTAHNVEEAFINT---- 169

Query: 122 PFSIIANNILDKIELGVLDLSNKLKWISHLESRSGYG 151
                A  I  KI+ GV D+SN+   I     + GYG
Sbjct: 170 -----AKEIYKKIQDGVFDVSNESYGI-----KVGYG 190

[Close]
BLAST of MELO3C035187.2 vs. Swiss-Prot
Match: sp|P53994|RAB2A_MOUSE (Ras-related protein Rab-2A OS=Mus musculus OX=10090 GN=Rab2a PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.4e-27
Identity = 72/161 (44.72%), Postives = 103/161 (63.98%), Query Frame = 0 

Query: 2   VKSKYVLLQ----AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAH 61
           +  K + LQ    AGQE+F+SITRSYYRGA GALLVYD+TRR TF++L +WL+D R+ ++
Sbjct: 50  IDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSN 109

Query: 62  PDISIMVV----DKNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYELITNSVVLQ 121
            ++ IM++    D   RREV  +KEEG+ FA ++GL F+ETSAKT+ NV E   N+    
Sbjct: 110 SNMVIMLIGNKSDLESRREV--KKEEGEAFAREHGLIFMETSAKTASNVEEAFINT---- 169

Query: 122 PFSIIANNILDKIELGVLDLSNKLKWI----SHLESRSGYG 151
                A  I +KI+ GV D++N+   I     H  + + +G
Sbjct: 170 -----AKEIYEKIQEGVFDINNEANGIKIGPQHAATNASHG 199

[Close]
BLAST of MELO3C035187.2 vs. Swiss-Prot
Match: sp|P05712|RAB2A_RAT (Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.4e-27
Identity = 72/161 (44.72%), Postives = 103/161 (63.98%), Query Frame = 0 

Query: 2   VKSKYVLLQ----AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAH 61
           +  K + LQ    AGQE+F+SITRSYYRGA GALLVYD+TRR TF++L +WL+D R+ ++
Sbjct: 50  IDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSN 109

Query: 62  PDISIMVV----DKNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYELITNSVVLQ 121
            ++ IM++    D   RREV  +KEEG+ FA ++GL F+ETSAKT+ NV E   N+    
Sbjct: 110 SNMVIMLIGNKSDLESRREV--KKEEGEAFAREHGLIFMETSAKTASNVEEAFINT---- 169

Query: 122 PFSIIANNILDKIELGVLDLSNKLKWI----SHLESRSGYG 151
                A  I +KI+ GV D++N+   I     H  + + +G
Sbjct: 170 -----AKEIYEKIQEGVFDINNEANGIKIGPQHAATNASHG 199

[Close]
BLAST of MELO3C035187.2 vs. Swiss-Prot
Match: sp|P61105|RAB2A_CANLF (Ras-related protein Rab-2A OS=Canis lupus familiaris OX=9615 GN=RAB2A PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 5.7e-27
Identity = 70/147 (47.62%), Postives = 98/147 (66.67%), Query Frame = 0 

Query: 2   VKSKYVLLQ----AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAH 61
           +  K + LQ    AGQE+F+SITRSYYRGA GALLVYD+TRR TF++L +WL+D R+ ++
Sbjct: 50  IDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSN 109

Query: 62  PDISIMVV----DKNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYELITNSVVLQ 121
            ++ IM++    D   RREV  +KEEG+ FA ++GL F+ETSAKT+ NV E   N+    
Sbjct: 110 SNMVIMLIGNKSDLESRREV--KKEEGEAFAREHGLIFMETSAKTASNVEEAFINT---- 169

Query: 122 PFSIIANNILDKIELGVLDLSNKLKWI 141
                A  I +KI+ GV D++N+   I
Sbjct: 170 -----AKEIYEKIQEGVFDINNEANGI 185

[Close]
BLAST of MELO3C035187.2 vs. TrEMBL
Match: tr|A0A1S3C8F9|A0A1S3C8F9_CUCME (LOW QUALITY PROTEIN: ras-related protein Rab-2A-like OS=Cucumis melo OX=3656 GN=LOC103498018 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.4e-54
Identity = 118/134 (88.06%), Postives = 118/134 (88.06%), Query Frame = 0 

Query: 11  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMV----VD 70
           AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMV    VD
Sbjct: 66  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVVXNKVD 125

Query: 71  KNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYELITNSVVLQPFSIIANNILDKI 130
           KNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYE         PFSIIANNILDKI
Sbjct: 126 KNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYE---------PFSIIANNILDKI 185

Query: 131 ELGVLDLSNKLKWI 141
           ELGVLDLSNK   I
Sbjct: 186 ELGVLDLSNKASGI 190

[Close]
BLAST of MELO3C035187.2 vs. TrEMBL
Match: tr|A0A1U7ZRX0|A0A1U7ZRX0_NELNU (ras-related protein RABB1b isoform X2 OS=Nelumbo nucifera OX=4432 GN=LOC104593038 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.5e-27
Identity = 74/144 (51.39%), Postives = 101/144 (70.14%), Query Frame = 0 

Query: 11  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV----D 70
           AGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+P+++IM++    D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCD 122

Query: 71  KNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYELITNSVVLQPFSIIANNILDKI 130
            + RR V+  KEEG+ FA++NGL F+E SA+T+QNV E   N+         A  IL KI
Sbjct: 123 LSHRRAVS--KEEGEQFAKENGLIFMEASARTAQNVEEAFINT---------AAKILQKI 182

Query: 131 ELGVLDLSNKLKWISHLESRSGYG 151
           + GV D+SN+   I     + GYG
Sbjct: 183 QEGVFDVSNESSGI-----KVGYG 190

[Close]
BLAST of MELO3C035187.2 vs. TrEMBL
Match: tr|A0A2R6P950|A0A2R6P950_ACTCH (Ras-related protein RABB1b OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc30587 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.2e-27
Identity = 76/144 (52.78%), Postives = 100/144 (69.44%), Query Frame = 0 

Query: 11  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV----D 70
           AGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+P+++IM+V    D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLVGNKCD 122

Query: 71  KNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYELITNSVVLQPFSIIANNILDKI 130
              RR V+  KEEG+ FA++NGL FLE SA+T+QNV E          F + A  IL KI
Sbjct: 123 LAHRRAVS--KEEGEQFAKENGLLFLEASARTAQNVEE---------AFIMTAAKILQKI 182

Query: 131 ELGVLDLSNKLKWISHLESRSGYG 151
           + GV D+SN+   I     + GYG
Sbjct: 183 QEGVFDVSNESSGI-----KVGYG 190

[Close]
BLAST of MELO3C035187.2 vs. TrEMBL
Match: tr|I0Z7W8|I0Z7W8_COCSC (Small rab-related GTPase OS=Coccomyxa subellipsoidea (strain C-169) OX=574566 GN=COCSUDRAFT_27204 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.2e-27
Identity = 78/157 (49.68%), Postives = 104/157 (66.24%), Query Frame = 0 

Query: 2   VKSKYVLLQ----AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAH 61
           +  K + LQ    AGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+
Sbjct: 50  IDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN 109

Query: 62  PDISIMVV----DKNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYELITNSVVLQ 121
           P+++IM++    D   RR VT   EEG+ FA+++GL FLETSAKT+ NV E   N+    
Sbjct: 110 PNMTIMLIGNKSDLTHRRAVT--TEEGEQFAKEHGLVFLETSAKTAHNVEEAFINT---- 169

Query: 122 PFSIIANNILDKIELGVLDLSNKLKWISHLESRSGYG 151
                A  I +KIE GV D+SN+   I     + GYG
Sbjct: 170 -----ARKIYEKIEQGVFDVSNESYGI-----KVGYG 190

[Close]
BLAST of MELO3C035187.2 vs. TrEMBL
Match: tr|A0A0A9Z188|A0A0A9Z188_LYGHE (Ras-related protein Rab-2A OS=Lygus hesperus OX=30085 GN=RAB2A_1 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 5.5e-27
Identity = 74/147 (50.34%), Postives = 101/147 (68.71%), Query Frame = 0 

Query: 2   VKSKYVLLQ----AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAH 61
           + SKY+ LQ    AGQEAF+SITRSYYRGA GALLVYD+TRR+TF++L +WLDD R+ ++
Sbjct: 50  IDSKYIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLDDARQHSN 109

Query: 62  PDISIMVV----DKNGRREVTKEKEEGQHFAEQNGLWFLETSAKTSQNVYELITNSVVLQ 121
            ++ IM++    D   RREV  +KEEG+ FA ++GL F+ETSAKT+ NV E   N+    
Sbjct: 110 SNMVIMLIGNKSDLESRREV--KKEEGEAFAREHGLIFMETSAKTAANVEEAFINT---- 169

Query: 122 PFSIIANNILDKIELGVLDLSNKLKWI 141
                A  I +KI+ GV D++N+   I
Sbjct: 170 -----AKEIYEKIQEGVFDINNEANGI 185

The following BLAST results are available for this feature:
BLAST of MELO3C035187.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008458689.12.1e-5488.06PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-2A-like, partial [Cucumi... [more]
XP_024978619.12.9e-2750.96ras-related protein RABB1b isoform X2 [Cynara cardunculus var. scolymus][more]
XP_024978618.12.9e-2753.47ras-related protein RABB1b isoform X1 [Cynara cardunculus var. scolymus][more]
XP_010250984.13.8e-2751.39PREDICTED: ras-related protein RABB1b isoform X2 [Nelumbo nucifera][more]
XP_011101827.14.9e-2752.05ras-related protein RABB1b [Sesamum indicum][more]
BLAST of MELO3C035187.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G17170.17.8e-2749.31RAB GTPase homolog B1C[more]
AT4G35860.11.0e-2661.22GTP-binding 2[more]
AT4G17160.11.2e-2243.85RAB GTPase homolog B1A[more]
AT1G73640.15.8e-2253.06RAB GTPase homolog A6A[more]
AT1G18200.17.6e-2250.00RAB GTPase homolog A6B[more]
BLAST of MELO3C035187.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q39570|YPTC4_CHLRE4.0e-2848.41GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii OX=3055 GN=YPTC4 PE=3 SV=... [more]
sp|P36863|YPTV4_VOLCA4.0e-2848.41GTP-binding protein yptV4 OS=Volvox carteri OX=3067 GN=YPTV4 PE=3 SV=1[more]
sp|P53994|RAB2A_MOUSE3.4e-2744.72Ras-related protein Rab-2A OS=Mus musculus OX=10090 GN=Rab2a PE=1 SV=1[more]
sp|P05712|RAB2A_RAT3.4e-2744.72Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1[more]
sp|P61105|RAB2A_CANLF5.7e-2747.62Ras-related protein Rab-2A OS=Canis lupus familiaris OX=9615 GN=RAB2A PE=1 SV=1[more]
BLAST of MELO3C035187.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C8F9|A0A1S3C8F9_CUCME1.4e-5488.06LOW QUALITY PROTEIN: ras-related protein Rab-2A-like OS=Cucumis melo OX=3656 GN=... [more]
tr|A0A1U7ZRX0|A0A1U7ZRX0_NELNU2.5e-2751.39ras-related protein RABB1b isoform X2 OS=Nelumbo nucifera OX=4432 GN=LOC10459303... [more]
tr|A0A2R6P950|A0A2R6P950_ACTCH4.2e-2752.78Ras-related protein RABB1b OS=Actinidia chinensis var. chinensis OX=1590841 GN=C... [more]
tr|I0Z7W8|I0Z7W8_COCSC4.2e-2749.68Small rab-related GTPase OS=Coccomyxa subellipsoidea (strain C-169) OX=574566 GN... [more]
tr|A0A0A9Z188|A0A0A9Z188_LYGHE5.5e-2750.34Ras-related protein Rab-2A OS=Lygus hesperus OX=30085 GN=RAB2A_1 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001806Small_GTPase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035187.2.1MELO3C035187.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 2..125
e-value: 4.7E-16
score: 69.3
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 2..116
e-value: 8.3E-5
score: -38.7
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 8..125
e-value: 1.1E-27
score: 98.4
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 10..139
NoneNo IPR availablePANTHERPTHR24073:SF597RAS-RELATED PROTEIN RABB1Bcoord: 10..139
NoneNo IPR availablePROSITEPS51419RABcoord: 1..162
score: 18.138
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 11..108
e-value: 7.5E-24
score: 84.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 11..106

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C035187.2Watermelon (Charleston Gray)medwcgB075
MELO3C035187.2Watermelon (Charleston Gray)medwcgB115
MELO3C035187.2Watermelon (Charleston Gray)medwcgB119
MELO3C035187.2Watermelon (97103) v1medwmB085
MELO3C035187.2Watermelon (97103) v1medwmB094
MELO3C035187.2Watermelon (97103) v1medwmB139
MELO3C035187.2Silver-seed gourdcarmedB0068
MELO3C035187.2Silver-seed gourdcarmedB0615
MELO3C035187.2Silver-seed gourdcarmedB0713
MELO3C035187.2Silver-seed gourdcarmedB0839
MELO3C035187.2Cucumber (Chinese Long) v3cucmedB167
MELO3C035187.2Cucumber (Chinese Long) v3cucmedB266
MELO3C035187.2Cucumber (Chinese Long) v3cucmedB441
MELO3C035187.2Watermelon (97103) v2medwmbB114
MELO3C035187.2Watermelon (97103) v2medwmbB118
MELO3C035187.2Watermelon (97103) v2medwmbB122
MELO3C035187.2Wax gourdmedwgoB102
MELO3C035187.2Wax gourdmedwgoB106
MELO3C035187.2Cucumber (Gy14) v2cgybmedB148
MELO3C035187.2Cucumber (Gy14) v2cgybmedB387
MELO3C035187.2Cucumber (Gy14) v1cgymedB297
MELO3C035187.2Cucumber (Gy14) v1cgymedB425
MELO3C035187.2Cucurbita maxima (Rimu)cmamedB365
MELO3C035187.2Cucurbita maxima (Rimu)cmamedB371
MELO3C035187.2Cucurbita maxima (Rimu)cmamedB846
MELO3C035187.2Cucurbita maxima (Rimu)cmamedB914
MELO3C035187.2Cucurbita moschata (Rifu)cmomedB225
MELO3C035187.2Cucurbita moschata (Rifu)cmomedB351
MELO3C035187.2Cucurbita moschata (Rifu)cmomedB357
MELO3C035187.2Cucurbita moschata (Rifu)cmomedB840
MELO3C035187.2Cucurbita moschata (Rifu)cmomedB903
MELO3C035187.2Cucurbita pepo (Zucchini)cpemedB138
MELO3C035187.2Cucurbita pepo (Zucchini)cpemedB143
MELO3C035187.2Cucurbita pepo (Zucchini)cpemedB331
MELO3C035187.2Cucurbita pepo (Zucchini)cpemedB659
MELO3C035187.2Cucurbita pepo (Zucchini)cpemedB933
MELO3C035187.2Wild cucumber (PI 183967)cpimedB165
MELO3C035187.2Wild cucumber (PI 183967)cpimedB437
MELO3C035187.2Cucumber (Chinese Long) v2cumedB165
MELO3C035187.2Cucumber (Chinese Long) v2cumedB420
MELO3C035187.2Cucumber (Chinese Long) v2cumedB428
MELO3C035187.2Melon (DHL92) v3.6.1medmedB049
MELO3C035187.2Melon (DHL92) v3.6.1medmedB054
MELO3C035187.2Bottle gourd (USVL1VR-Ls)lsimedB019
MELO3C035187.2Bottle gourd (USVL1VR-Ls)lsimedB180
MELO3C035187.2Bottle gourd (USVL1VR-Ls)lsimedB359