MELO3C034972.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C034972.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr11 : 12538786 .. 12539250 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAGGGGGTTAGTAATCAAAGAACACACCCATTGTACGAATAGTTGTGACAATTTCTCCGAGCTTAAGCTTGTACAAGATCGTGGTCTTTCCAGCAACATCAAGACCAACCATCAAAATCTGCATCTCCTTCTTTGCAAAAAGCCTACTGAAAAGCTTGGTGAAGGTCAATCTCATTTCTCCTTTCCCTTAGCCAGCTATTTTCAATTTGTCTAAGAACCTGATACGTAACAAAAAGAAACCAACAAAAGTAATCAAATCTAGCAACCTAACAAACAACAAAGATAGCAAAAGAGAAAGGGAGCAGCGTTCACGTTCGCGTTAGGCATTCGACGAGCAAGGGAGCAGGGGAGCAGCGTTCGCGTTAGGCGTTCGACGTTCGGATGGAAGTTAGCGTTTGGCGTTCGGCGACGTTCGGGATGGTTGAGCAGGGGAGGCATCGGCGGCATTTTGGATGGGTGA

mRNA sequence

ATGAAAAGGGGGTTAGTAATCAAAGAACACACCCATTGTACGAATAGTTGTGACAATTTCTCCGAGCTTAAGCTTGTACAAGATCGTGGTCTTTCCAGCAACATCAAGACCAACCATCAAAATCTGCATCTCCTTCTTTGCAAAAAGCCTACTGAAAAGCTTGGTGAAGCGTTCACGTTCGCGTTAGGCATTCGACGAGCAAGGGAGCAGGGGAGCAGCGTTCGCGTTAGGCGTTCGACGTTCGGATGGAAGTTAGCGTTTGGCGTTCGGCGACGTTCGGGATGGTTGAGCAGGGGAGGCATCGGCGGCATTTTGGATGGGTGA

Coding sequence (CDS)

ATGAAAAGGGGGTTAGTAATCAAAGAACACACCCATTGTACGAATAGTTGTGACAATTTCTCCGAGCTTAAGCTTGTACAAGATCGTGGTCTTTCCAGCAACATCAAGACCAACCATCAAAATCTGCATCTCCTTCTTTGCAAAAAGCCTACTGAAAAGCTTGGTGAAGCGTTCACGTTCGCGTTAGGCATTCGACGAGCAAGGGAGCAGGGGAGCAGCGTTCGCGTTAGGCGTTCGACGTTCGGATGGAAGTTAGCGTTTGGCGTTCGGCGACGTTCGGGATGGTTGAGCAGGGGAGGCATCGGCGGCATTTTGGATGGGTGA

Protein sequence

MKRGLVIKEHTHCTNSCDNFSELKLVQDRGLSSNIKTNHQNLHLLLCKKPTEKLGEAFTFALGIRRAREQGSSVRVRRSTFGWKLAFGVRRRSGWLSRGGIGGILDG
BLAST of MELO3C034972.2 vs. NCBI nr
Match: PHT24427.1 (hypothetical protein CQW23_35836 [Capsicum baccatum])

HSP 1 Score: 56.6 bits (135), Expect = 6.0e-05
Identity = 31/53 (58.49%), Postives = 36/53 (67.92%), Query Frame = 0

Query: 4  GLVIKEHTHCTNSCDNFSELKLVQDRGLSSNIKTNHQNLHLLLCKKPTEKLGE 57
          GL IK +    N  D+ SELKLVQD  L+S I+T H+N HL L KKP EKLGE
Sbjct: 26 GLYIKSNGR--NGGDDLSELKLVQDSSLTSCIETYHENSHLFLSKKPAEKLGE 76

BLAST of MELO3C034972.2 vs. TrEMBL
Match: tr|A0A1J3CFT5|A0A1J3CFT5_NOCCA (Uncharacterized protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=GA_TR15828_c2_g1_i1_g.48519 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.3e-05
Identity = 27/46 (58.70%), Postives = 35/46 (76.09%), Query Frame = 0

Query: 11 THCTNSCDNFSELKLVQDRGLSSNIKTNHQNLHLLLCKKPTEKLGE 57
          T+  N  D+ SEL+LVQD  L+S+IKTNHQ+ HL LCK+P E+L E
Sbjct: 14 TNGRNGSDDLSELELVQDGRLTSSIKTNHQDSHLFLCKEPAEQLSE 59

BLAST of MELO3C034972.2 vs. TrEMBL
Match: tr|A0A2G2UUK3|A0A2G2UUK3_CAPBA (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_35836 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.9e-05
Identity = 31/53 (58.49%), Postives = 36/53 (67.92%), Query Frame = 0

Query: 4  GLVIKEHTHCTNSCDNFSELKLVQDRGLSSNIKTNHQNLHLLLCKKPTEKLGE 57
          GL IK +    N  D+ SELKLVQD  L+S I+T H+N HL L KKP EKLGE
Sbjct: 26 GLYIKSNGR--NGGDDLSELKLVQDSSLTSCIETYHENSHLFLSKKPAEKLGE 76

BLAST of MELO3C034972.2 vs. TrEMBL
Match: tr|A0A1J3FG78|A0A1J3FG78_NOCCA (Uncharacterized protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=LC_TR1283_c6_g1_i1_g.4348 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 6.7e-05
Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 0

Query: 11 THCTNSCDNFSELKLVQDRGLSSNIKTNHQNLHLLLCKKPTEKLGE 57
          T+  N  D+ S+L+LVQD  L+S+IKTNHQ+ HL LCK+P E+L E
Sbjct: 14 TNGRNGSDDLSKLELVQDGRLTSSIKTNHQDSHLFLCKEPAEQLSE 59

BLAST of MELO3C034972.2 vs. TrEMBL
Match: tr|A0A1J3IDT2|A0A1J3IDT2_NOCCA (Uncharacterized protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=MP_TR23595_c1_g1_i1_g.68897 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.6e-04
Identity = 25/46 (54.35%), Postives = 35/46 (76.09%), Query Frame = 0

Query: 11 THCTNSCDNFSELKLVQDRGLSSNIKTNHQNLHLLLCKKPTEKLGE 57
          T+  N  D+ S+L+LVQD  L+S+IKT+HQ+ HL LCK+P E+L E
Sbjct: 14 TNGRNGSDDLSKLELVQDGRLTSSIKTHHQDSHLFLCKEPAEQLSE 59

BLAST of MELO3C034972.2 vs. TrEMBL
Match: tr|A0A0P6C1N8|A0A0P6C1N8_9CRUS (ADP-ribosylation factor OS=Daphnia magna OX=35525 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.4e-04
Identity = 23/46 (50.00%), Postives = 32/46 (69.57%), Query Frame = 0

Query: 11 THCTNSCDNFSELKLVQDRGLSSNIKTNHQNLHLLLCKKPTEKLGE 57
          T+C N CDNF++LK V+D G +S +K+NHQ  H L  KK  E+ G+
Sbjct: 31 TNCGNGCDNFTQLKFVEDCGFTSCVKSNHQYSHFLFAKKAFEQGGK 76

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PHT24427.16.0e-0558.49hypothetical protein CQW23_35836 [Capsicum baccatum][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1J3CFT5|A0A1J3CFT5_NOCCA2.3e-0558.70Uncharacterized protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=GA_TR158... [more]
tr|A0A2G2UUK3|A0A2G2UUK3_CAPBA3.9e-0558.49Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_35836 PE=4 SV=1[more]
tr|A0A1J3FG78|A0A1J3FG78_NOCCA6.7e-0556.52Uncharacterized protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=LC_TR128... [more]
tr|A0A1J3IDT2|A0A1J3IDT2_NOCCA2.6e-0454.35Uncharacterized protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=MP_TR235... [more]
tr|A0A0P6C1N8|A0A0P6C1N8_9CRUS4.4e-0450.00ADP-ribosylation factor OS=Daphnia magna OX=35525 PE=3 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034972.2.1MELO3C034972.2.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None