MELO3C034925.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C034925.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr11 : 29662010 .. 29662378 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGCGACAATCACCGCCGCCGTAGACCGGCCCAAAGACCCGACGGCCACCGTATCCTCAACCAGAATCGCCTTCCCTTCCAAATCCCCAAAAGGATTCTCAGCGATTACATTACACGCGCCACCAACAGACCCAGATCTGCCCCCAGCAGTAGCCGCAATACACTGAATAGAGCGACTGGGAATCGAACGGCTGGAAGAAGATCCACCACAAGCCATCCAGAGAGACCGGCCGCCAAGATCGACAGCGAGATGGACGGGCTTAATAGGAGAACCATGGAAAACAGTGGCCAAATACTGATTGGTGAGGGAATCTTTAGTGAGGGGGATGACGAGAGAGAAGGTTTGGCCATGGAAGAGGGTTAA

mRNA sequence

ATGAAGAGCGACAATCACCGCCGCCGTAGACCGGCCCAAAGACCCGACGGCCACCGTATCCTCAACCAGAATCGCCTTCCCTTCCAAATCCCCAAAAGGATTCTCAGCGATTACATTACACGCGCCACCAACAGACCCAGTGAATAGAGCGACTGGGAATCGAACGGCTGGAAGAAGATCCACCACAAGCCATCCAGAGAGACCGGCCGCCAAGATCGACAGCGAGATGGACGGGCTTAATAGGAGAACCATGGAAAACAGTGGCCAAATACTGATTGGTGAGGGAATCTTTAGTGAGGGGGATGACGAGAGAGAAGGTTTGGCCATGGAAGAGGGTTAA

Coding sequence (CDS)

ATGAAGAGCGACAATCACCGCCGCCGTAGACCGGCCCAAAGACCCGACGGCCACCGTATCCTCAACCAGAATCGCCTTCCCTTCCAAATCCCCAAAAGGATTCTCAGCGATTACATTACACGCGCCACCAACAGACCCAGTGAATAG

Protein sequence

MKSDNHRRRRPAQRPDGHRILNQNRLPFQIPKRILSDYITRATNRPSE
Homology
[Close]
BLAST of MELO3C034925.2 vs. NCBI nr
Match: KGN47257.1 (hypothetical protein Csa_6G237605 [Cucumis sativus])

HSP 1 Score: 85.9 bits (211), Expect = 4.1e-14
Identity = 42/46 (91.30%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 1  MKSDNHRRRRPAQRPDGHRILNQNRLPFQIPKRILSDYITRATNRP 47
          MKSDNHR RRP QRPDGHRILNQNRLPFQIPK I SDYITRATNRP
Sbjct: 1  MKSDNHRCRRPVQRPDGHRILNQNRLPFQIPKGIPSDYITRATNRP 46

[Close]
BLAST of MELO3C034925.2 vs. TrEMBL
Match: tr|A0A0A0KFQ4|A0A0A0KFQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G237605 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.7e-14
Identity = 42/46 (91.30%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 1  MKSDNHRRRRPAQRPDGHRILNQNRLPFQIPKRILSDYITRATNRP 47
          MKSDNHR RRP QRPDGHRILNQNRLPFQIPK I SDYITRATNRP
Sbjct: 1  MKSDNHRCRRPVQRPDGHRILNQNRLPFQIPKGIPSDYITRATNRP 46

The following BLAST results are available for this feature:
BLAST of MELO3C034925.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47257.14.1e-1491.30hypothetical protein Csa_6G237605 [Cucumis sativus][more]
BLAST of MELO3C034925.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C034925.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C034925.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KFQ4|A0A0A0KFQ4_CUCSA2.7e-1491.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G237605 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034925.2.1MELO3C034925.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C034925.2Silver-seed gourdcarmedB0068
MELO3C034925.2Silver-seed gourdcarmedB0234
MELO3C034925.2Silver-seed gourdcarmedB0336
MELO3C034925.2Silver-seed gourdcarmedB0615
MELO3C034925.2Cucumber (Chinese Long) v3cucmedB167
MELO3C034925.2Cucumber (Chinese Long) v3cucmedB445
MELO3C034925.2Watermelon (97103) v2medwmbB114
MELO3C034925.2Watermelon (97103) v2medwmbB118
MELO3C034925.2Wax gourdmedwgoB101
MELO3C034925.2Wax gourdmedwgoB106
MELO3C034925.2Cucumber (Gy14) v2cgybmedB148
MELO3C034925.2Cucumber (Gy14) v2cgybmedB391
MELO3C034925.2Cucumber (Gy14) v1cgymedB425
MELO3C034925.2Cucurbita maxima (Rimu)cmamedB242
MELO3C034925.2Cucurbita maxima (Rimu)cmamedB365
MELO3C034925.2Cucurbita maxima (Rimu)cmamedB846
MELO3C034925.2Cucurbita maxima (Rimu)cmamedB914
MELO3C034925.2Cucurbita moschata (Rifu)cmomedB225
MELO3C034925.2Cucurbita moschata (Rifu)cmomedB351
MELO3C034925.2Cucurbita moschata (Rifu)cmomedB840
MELO3C034925.2Cucurbita moschata (Rifu)cmomedB903
MELO3C034925.2Cucurbita pepo (Zucchini)cpemedB138
MELO3C034925.2Cucurbita pepo (Zucchini)cpemedB337
MELO3C034925.2Cucurbita pepo (Zucchini)cpemedB659
MELO3C034925.2Cucurbita pepo (Zucchini)cpemedB933
MELO3C034925.2Wild cucumber (PI 183967)cpimedB165
MELO3C034925.2Wild cucumber (PI 183967)cpimedB421
MELO3C034925.2Cucumber (Chinese Long) v2cumedB165
MELO3C034925.2Cucumber (Chinese Long) v2cumedB412
MELO3C034925.2Melon (DHL92) v3.6.1medmedB049
MELO3C034925.2Bottle gourd (USVL1VR-Ls)lsimedB019
MELO3C034925.2Bottle gourd (USVL1VR-Ls)lsimedB359
MELO3C034925.2Watermelon (Charleston Gray)medwcgB115
MELO3C034925.2Watermelon (Charleston Gray)medwcgB119
MELO3C034925.2Watermelon (97103) v1medwmB094
MELO3C034925.2Watermelon (97103) v1medwmB139