MELO3C034834.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C034834.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	GDSL esterase/lipase 7
Location	chr11 : 7354081 .. 7354431 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAAGTCGATCCTTCACAGGTTGTTTGTAATCTTGGCTGGGTCAATATACCGTTTCACCCCCGAGATTACATCTTGCTCCTTAAGACCCACTGATCCACTATTGAACAATTGGTTTAAGGTCCAACCTATAAACCAGAATCCTTCTCGAGCCAATGAGAAGGTGGGGCCCCTTGTTCAAGACTTGGATTCAGTCCTTAAGGGAACAACCTATCTACTATCCCATAAGTGGGTAGGAGTGAATTCCATCTTGCACCCTATGTCCCTAGCTATCCACTCGGTCGTACTCCTGAAATGGGAGGCTTATTGGGCCAGCGATGTTGAGCTACCCTCACTTATACAGATCTAA

mRNA sequence

ATGGGTAAGTCGATCCTTCACAGGTTGTTTGTAATCTTGGCTGGGTCAATATACCGTTTCACCCCCGAGATTACATCTTGCTCCTTAAGACCCACTGATCCACTATTGAACAATTGGTTTAAGGTCCAACCTATAAACCAGAATCCTTCTCGAGCCAATGAGAAGGTGGGGCCCCTTGTTCAAGACTTGGATTCAGTCCTTAAGGGAACAACCTATCTACTATCCCATAAGTGGGTAGGAGTGAATTCCATCTTGCACCCTATGTCCCTAGCTATCCACTCGGTCGTACTCCTGAAATGGGAGGCTTATTGGGCCAGCGATGTTGAGCTACCCTCACTTATACAGATCTAA

Coding sequence (CDS)

ATGGGTAAGTCGATCCTTCACAGGTTGTTTGTAATCTTGGCTGGGTCAATATACCGTTTCACCCCCGAGATTACATCTTGCTCCTTAAGACCCACTGATCCACTATTGAACAATTGGTTTAAGGTCCAACCTATAAACCAGAATCCTTCTCGAGCCAATGAGAAGGTGGGGCCCCTTGTTCAAGACTTGGATTCAGTCCTTAAGGGAACAACCTATCTACTATCCCATAAGTGGGTAGGAGTGAATTCCATCTTGCACCCTATGTCCCTAGCTATCCACTCGGTCGTACTCCTGAAATGGGAGGCTTATTGGGCCAGCGATGTTGAGCTACCCTCACTTATACAGATCTAA

Protein sequence

MGKSILHRLFVILAGSIYRFTPEITSCSLRPTDPLLNNWFKVQPINQNPSRANEKVGPLVQDLDSVLKGTTYLLSHKWVGVNSILHPMSLAIHSVVLLKWEAYWASDVELPSLIQI

Homology

[Close]

BLAST of MELO3C034834.2 vs. NCBI nr
Match: ABY56105.1 (hypothetical protein [Cucumis sativus])

HSP 1 Score: 69.3 bits (168), Expect = 9.6e-09
Identity = 36/58 (62.07%), Postives = 42/58 (72.41%), Query Frame = 0


Query: 60  VQDLDSVLKGTTYLLSHKWVG-VNSILHPMSLAIHSVVLLKWEAYWASDVELPSLIQI 117
           +QDLDS LKGTTYLL+ KWV  VN +LHP S A H V+ L+ E YWAS  ELP L+ I
Sbjct: 87  IQDLDSTLKGTTYLLTLKWVDQVNYVLHPPSPATHLVLSLELEVYWASPDELPPLMYI 144

[Close]

BLAST of MELO3C034834.2 vs. TrEMBL
Match: tr|B0F826|B0F826_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.4e-09
Identity = 36/58 (62.07%), Postives = 42/58 (72.41%), Query Frame = 0


Query: 60  VQDLDSVLKGTTYLLSHKWVG-VNSILHPMSLAIHSVVLLKWEAYWASDVELPSLIQI 117
           +QDLDS LKGTTYLL+ KWV  VN +LHP S A H V+ L+ E YWAS  ELP L+ I
Sbjct: 87  IQDLDSTLKGTTYLLTLKWVDQVNYVLHPPSPATHLVLSLELEVYWASPDELPPLMYI 144

The following BLAST results are available for this feature:

BLAST of MELO3C034834.2 vs. NCBI nr


Match Name	E-value	Identity	Description
ABY56105.1	9.6e-09	62.07	hypothetical protein [Cucumis sativus]	[more]

BLAST of MELO3C034834.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C034834.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C034834.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|B0F826\|B0F826_CUCSA	6.4e-09	62.07	Uncharacterized protein OS=Cucumis sativus OX=3659 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016788	hydrolase activity, acting on ester bonds

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034834.2.1	MELO3C034834.2.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C034834.2	Cucumber (Gy14) v2	cgybmedB080
MELO3C034834.2	Cucumber (Gy14) v1	cgymedB435
MELO3C034834.2	Cucurbita maxima (Rimu)	cmamedB573
MELO3C034834.2	Cucurbita maxima (Rimu)	cmamedB616
MELO3C034834.2	Cucurbita moschata (Rifu)	cmomedB561
MELO3C034834.2	Cucurbita moschata (Rifu)	cmomedB605
MELO3C034834.2	Cucurbita pepo (Zucchini)	cpemedB306
MELO3C034834.2	Cucurbita pepo (Zucchini)	cpemedB806
MELO3C034834.2	Wild cucumber (PI 183967)	cpimedB088
MELO3C034834.2	Cucumber (Chinese Long) v2	cumedB088
MELO3C034834.2	Bottle gourd (USVL1VR-Ls)	lsimedB054
MELO3C034834.2	Watermelon (Charleston Gray)	medwcgB088
MELO3C034834.2	Watermelon (97103) v1	medwmB120
MELO3C034834.2	Silver-seed gourd	carmedB1034
MELO3C034834.2	Cucumber (Chinese Long) v3	cucmedB096
MELO3C034834.2	Watermelon (97103) v2	medwmbB087
MELO3C034834.2	Wax gourd	medwgoB128
MELO3C034834.2	Wax gourd	medwgoB139