MELO3C034801.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C034801.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionzinc finger BED domain-containing protein RICESLEEPER 2-like
Locationchr11 : 6557348 .. 6563222 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGTCAGTGCTTTAGAAAATGTAATTATCAATAATTATTGTCCTCTTTTTCTTGTTAGGATATTGGTAATTTTTAGGCATGAATTATAGGAACATATTGGGGAACGAAGGATGTGTGGGTTTTGGAGTCCGGTACGGTGGGTCTAATATGTGTTTAGGGTAAAGAGTGCTTAGGAAGCTTTGCATCCTAGAGTTTCCTGGTCAAGACGTCTTTAGTTTGGGAGAAATATTCCTCATCACTCATTTTGTGCTTAGTTGACTGTGTGAGATAGACCGGGGACAAAGGGATTGGTTAGTTGTGTAGTGGTGGTGGGATAGTATAATTGGAGCGTCTATTATATCCGTTTTAGTTGGAGTTGGAGTTTTAGGATCATTTGTTCTTTGATTTTGGACTTAGTTGTAGAGTATGGGGTGAGATTCTAGGTTTAATGAGTTACTCATCAGATAATTTGGTGGAGGGTTGAGTTATAGTGGGTGTGTTAGGTTGGGTTGGGTTGGGTAAGGGTGTAAGTTAAAGTCAAAGTTATGGCATACGCTGTTGTATGATGTTGCTATTTATTTTAAACTGGTAGGATCATAATCCATTGGTTGTATGGTGGCTCATCCATGATGTTTTTGTGGTTGTGAGACTTCTTGTTTTTACTGTTCATACTCATGCTACTTCTTGATCTGATGATATTATTGACCAGCTTTAGTGGACTTTGTTTTTGTCATATTTTATGTTCTTGTTTTGTGCAAGGGTGAAAATACCCGACCCGAATCGATGACCCGACCCGACCCGATTCGGTTTGGGTTGGACCGGTTAGTAACAAAAGCGTTACCGAACCGAATCGAATCGATTTGATTCGGTCGGGTCGGGTTTAAAATTAACCGATTAGGTTAAAATTTTTCTTTGCCTGCGTCTGCGATTTCATTTCCTCTCCTCTTCGTCGACTCTTCTTCACCTCTTCGTCTACAAACTCCGTCGGCATCTTCTCTTCATCTGCATCGGCGTCGGCATCAACTCTTCATCTTCATCTCTTTGCCACTTCATCGTATTCATCCTCCGATTACAGCCTTCTCAAGCTTTCTTGTAACCTTCAAGATCTTCAGATTCTCAGGTATTTTTGGGTCTTTTTTTCTATTTATTTGGTGTTATTGCCTATATAATCGGTAGATGTCTCTGTTATGTGATGAGTTTTTCTTTCTTGGTTTAATCCTTCGAGTTTTTCTTTCTGTCTCTGTTCTGTTCTCTGTTCTTGGTTTGATCTTCGCTGTTTGGGGTTTCATGGTTTCAATTTTCTGTCGCTGCCTGTTAGTAATTGAGTTTAAAATTTTTCATGTGCAAATCAAGAATCTGATATGAATGGCATTAGAAATGAGTTAGAGTATTAAGGATACTAACAACTAGTTAAGGAGTTTGTTGGGGGAAGTTTGGTTATGAATACAATGAGAAGGGAAGAAAGAATATTGACAATATTTTTTGAATGAATTGGGGCTCGAGAATATCAAGATTGGGATTGTTAAGTACCTTGTACTCTTGGTTTATCTTGTAATTCCATTACTGTTAATCATATTTGGATTCTATCAATTTGGTATCATTATGTTGATAGATATCTGGTCGTAAGAACTAAGAATTGCAGCCCAAAATTAATGACTGAAGAAATTTTCCAAATTACCTTCATTTCTACAGTGGCTGTAAAGTCTACCGAACTCTGTCGTTTCTGCTTCGTTTAAGGTTTCATGGTTTCAATTTTCTGTCGCTGCCTGTTAGTAATTGAGTTTAAAATTTCAAGTACTGAGGAAAACACCAAATAATTGATTTTTTCAACTGATACTAATTCTTGTTCAAGAGTGTTTCTAATTCTAACCATGTAGAGATAGAGAAGGATATTTAGGAATAATAATTATACTATAAAATTGAAGGGAATCTATCGTCTTTCTTATTCTAGTATTGGGTTATTCAAAAACAAGTTTCTTAACTAAAAAAAATAACTAATTAAGCTAATGTGAATAAGTGCCAATGTAAAAAATCAATTATTGAGAAAAAAACTGTTTAGAGTAAATTTTGAAAATATTTCCAGAACCATTTTAGATGAATTGTGAAATACTTCATTGTGAAATACTATAAAATTGTGAACCATTTTAGAATTGAAAATAATGTCCATTCAAAGATCAAACTTTGTTGGATTTCAAAAGTCCACTTCTTCATGGTCACTTTTTGGCTTTTTCAGTTTTCACTCTTATGAATTAAGATATAGCTAGCTTGGTTATACCTACTGAAAATACACCTCAAAAGAGTTTATTGAGCTAAAATAGTTAATTAAAAATACACTCAAAGAGTTTAAGAAGCTAAAATAATAAACGAAGTCTTCCAAGTACTTGCCAAACTGTGTTATTAACAACAATTTTATTCCCAACTTCAAACCTGCAAGTGTTGACCTCCAAACCTTATTCATTGTTTAAAATGGTAAATAATTTACCTTATTCATTGTTTAAAATGCATGAGCTTCTGTGTGAATCAATTATTGATTTGAGTGTTGTTCTTTCCTATGTGTTTTGTTTGATGATTATTAGGATGACTTCATTCTCAGTAGACGAGACTTCAAATCAGAGTTGTTCTAGTCCAGTGTTAGGAAAAAGAAAACCAGTTAAACCACCATCATCGGTATGGAAACATTTTATAAAAGTAGAAGGATGTGATCCTAAATATCCTAGGGCTGCTTGTAAACATTGTGGGACTTCATATGCTTATGATTCCAAAAGAAATGGTACCACTAATTTAAAAAGACATTTAGAGAAATGTATGATGTATGTAAATCCATTGGAAGATAATGTTGAAGGAGAGGGAGATTCTGAAAGTAGTTTGATGGCTCATCATTCACTCAAGAAAATTGTAGAAAAATGCTTACTAGAATGGTTATCTTGGATGAATTTCCATTTAAGTTCGTAGAAAGTGAAGGGTTTCACCAATTTTTTCGGACATTAAATCCCAAGTTTGTGATTCCATCAAGAGTAACCGTTGCAAAAGATTGTTTTCAAATGTATATGAAGGAGAAAAAAAAGTTAAAAAATGCATTAACTCGAAGTGGCCAAAGAGTTTGTTTAACAATGGATACGTGGACTTCTGTGCAAAATATTAATTATATGGTTATAACGGCTCATTTCATTGATGATGATTGGAACTTGCACAAAAGAATTTTGAACTTTTGTCAAGTAGCTAATCATAAAGGAGATACCCTAGGAAGAGCCATTAAAAAGTGCCTAGAAGGTTGGGGTATTGATAGGCTCTTTACTATAACGGTTGATAATGCGAGTTCAAATGATGTAGCCATTGCGTACTTGGTTAAAAAGTTTAAAGGCAGAAATGGGTTGGTGTTGGATGGTGAATTTATTCACATTAGATGTTGTGCCCATATTCTTAATTTAATTGTTAGTGATGCATTAAAAGATTTCCATGTGTCTATCATTCGAATCAGAAATGCCGTGAAGTATGTTAGGTCATCTCCTACTAGATTGCAAATATTTAAAGATTTTGCTAAAGAAGATAAGATGTCAACAAAAAATTGTCTTACAATGGATGTTCCGACACGATGGAATTTTACTTTTACTATGTTGGATGGAGCAATTAAGTGTCAAAAGACTTTTGAAAGATTGGTGGAGCATGACCCTAGTTATTTGCCAAAGGATGATATTCCTACTACTGAAGATTAGGATAATGCAAAAGTGTTTGTAAAGTTCCTAAAGACTTTTTCAGAGGTAACAATGAAGTTTTCTGCATCTATGTCTGTGACTTCAAACATATTTTTTCATGAACTTTATTTGATCCAAGAAATAATTCGTGAATACTCATCGTATGAGAATGCATTATTGAGTCAAATGACATTAAGCATGCAGtNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGTGGCTCGTTATCTGGATGAGGCTCGTATAGATTGTACGGGCGATGAATATTTAGATTTGCTAACTTGGTGGAAGGTGAATTCCTCTCGATTTAAGATCATTAGCCAAATAGCTAAGGACATCTACAGTATTCCTATATCAACTGTGCCTTCTGAGTCCGCCTTTAGCATTGGAGGACGGGTGTTAGATTCTTTTCGAAGTTCTTTAACTCCTCAAACTGCAGAGCCACTCATTTGTGCTCATAATTGGATTCAGTCTAAACCTTTGGATGACATGACTGAAGAAATTGACGGGGCTGAAGAAATTGATGAAGGTAATATTCTTTTTGAAGTACGCATTTAAAATTTTTAATTATCCCATATAAGCTAACTGTTTGTCATTTTGATCTAGAATTCATAAACATAGGAAAGAAGATGGAAGCTGCATTTGAGAATTTGAATAATGACTCTATGGTTTAAATCCCTACTCTCAAATCTTTATTTACATTTTTTTAAATTGTTAACTTGTTAAATATCGAATCTTGTTTTTTTAGAGTCTTGAAGCACAGTGATGGAAGCACTTCTTTAAGAACGACAGAACCAGATCCCAGGTATTTGTGATTCAAATTTTCAAACTAGTCAAACAATTTATGATGACAATGATTTCATTCATTAACTGTGTAAGTTTTAATGTTGCATCAGTGGGATGTTCTCTCGGATGGCAATCCAGTTCAAGAGGTTGCTCATATATCCAACGGTGTATCCAGTTCAACACTATTTTTGGATCTATGCTCCACAACTGTTTGATGAGATGTGGGAGTGTTTGTGGTGGCAAAATTGAATCTGAGGGTTAGTTGGGAGCTTTGAATGTGCTAAACCATTATTTACTATTACTGCCAAAGCAAAACTCCTATCATCCCACTCCCATTTTACAACCAATATTGTTGTTGTTGTTATTAATTGGTTTTGTTTAGTTTAGTTTTGGGAGGAACTTTTCATGTTCTATATCATAGCTTCTATATCACGTTCTATATTCTGAACAATATTGTTTGGCTTTTTGCTGTGTTAGAGATTGGTTTTAACTGTCATATCATTTCAGAATATGATTGTGCTTAATTAGAAAACATATATGCAAGGGGATGGTTTAGAATTGTGTCAAACCTTCTAGAAAAAAATCCATTATGATTAAACTTGAAAAAGTGTAATTCTTTATTACTATATATTATTTTTTCGTAGCTTTAGAATAATGTTTTTGAATTGTGTATCTGAAGGAGGAGGAGGAAAAAAAAAGAAAAAAAACCCGACCCGACCCGAATATGGGTCGGGTCGGGTCGGGCAATCTGTTTCAGATTTAACCGTGCATTTCGGGTCGGGTCAGTTTTGAAGAAAACCCGACCCGACCCGACCCAATTACACCCCTAGTTTTGTGATTTCTTCCTTCTATTTGCATGATGTTTGTAGTTGGTAGTGCTTCTCTCGGGCAGTTTGTTGCTTTGTTGTGCGCTCTGCTATCTGTGTCGATCTTGAGTTATGGGCCTCATTATTTTTTTGTTTTATAGATATGCCTTAA

mRNA sequence

ATGTTGGTCAGTGCTTTAGAAAATGATATTGGAACATATTGGGGAACGAAGGATGTGTGGGTTTTGGAGTCCGGTACGGGTGAAAATACCCGACCCGAATCGATGACCCGACCCGACCCGATTCGGTTTGGGTTGGACCGGTTAAAATTTTTCTTTGCCTGCGTCTGCGATTTCATTTCCTCTCCTCTTCGTCGACTCTTCTTCACCTCTTCGTCTACAAACTCCGTCGGCATCTTCTCTTCATCTGCATCGGCGTCGGCATCAACTCTTCATCTTCATCTCTTTGCCACTTCATCGTATTCATCCTCCGATTACAGCCTTCTCAAGCTTTCTTGTAACCTTCAAGATCTTCAGATTCTCAGGATGACTTCATTCTCAGTAGACGAGACTTCAAATCAGAGTTGTTCTAGTCCAGTGTTAGGAAAAAGAAAACCAGTTAAACCACCATCATCGGTGAATTCCTCTCGATTTAAGATCATTAGCCAAATAGCTAAGGACATCTACAGTATTCCTATATCAACTGTGCCTTCTGAGTCCGCCTTTAGCATTGGAGGACGGGTGTTAGATTCTTTTCGAAGTTCTTTAACTCCTCAAACTGCAGAGCCACTCATTTGTGCTCATAATTGGATTCAGTCTAAACCTTTGGATGACATGACTGAAGAAATTGACGGGGCTGAAGAAATTGATGAAGTCTTGAAGCACAGTGATGGAAGCACTTCTTTAAGAACGACAGAACCAGATCCCAGCTTTAGAATAATGTTTTTGAATTGTGTATCTGAAGGAGGAGGAGGAAAAAAAAAGAAAAAAAACCCGACCCGACCCGAATATGGGTCGGGTCGGGTCGGGCAATCTGTTTCAGATTTAACCGTGCATTTCGGGTCGGATATGCCTTAA

Coding sequence (CDS)

ATGTTGGTCAGTGCTTTAGAAAATGATATTGGAACATATTGGGGAACGAAGGATGTGTGGGTTTTGGAGTCCGGTACGGGTGAAAATACCCGACCCGAATCGATGACCCGACCCGACCCGATTCGGTTTGGGTTGGACCGGTTAAAATTTTTCTTTGCCTGCGTCTGCGATTTCATTTCCTCTCCTCTTCGTCGACTCTTCTTCACCTCTTCGTCTACAAACTCCGTCGGCATCTTCTCTTCATCTGCATCGGCGTCGGCATCAACTCTTCATCTTCATCTCTTTGCCACTTCATCGTATTCATCCTCCGATTACAGCCTTCTCAAGCTTTCTTGTAACCTTCAAGATCTTCAGATTCTCAGGATGACTTCATTCTCAGTAGACGAGACTTCAAATCAGAGTTGTTCTAGTCCAGTGTTAGGAAAAAGAAAACCAGTTAAACCACCATCATCGGTGAATTCCTCTCGATTTAAGATCATTAGCCAAATAGCTAAGGACATCTACAGTATTCCTATATCAACTGTGCCTTCTGAGTCCGCCTTTAGCATTGGAGGACGGGTGTTAGATTCTTTTCGAAGTTCTTTAACTCCTCAAACTGCAGAGCCACTCATTTGTGCTCATAATTGGATTCAGTCTAAACCTTTGGATGACATGACTGAAGAAATTGACGGGGCTGAAGAAATTGATGAAGTCTTGAAGCACAGTGATGGAAGCACTTCTTTAAGAACGACAGAACCAGATCCCAGCTTTAGAATAATGTTTTTGAATTGTGTATCTGAAGGAGGAGGAGGAAAAAAAAAGAAAAAAAACCCGACCCGACCCGAATATGGGTCGGGTCGGGTCGGGCAATCTGTTTCAGATTTAACCGTGCATTTCGGGTCGGATATGCCTTAA

Protein sequence

MLVSALENDIGTYWGTKDVWVLESGTGENTRPESMTRPDPIRFGLDRLKFFFACVCDFISSPLRRLFFTSSSTNSVGIFSSSASASASTLHLHLFATSSYSSSDYSLLKLSCNLQDLQILRMTSFSVDETSNQSCSSPVLGKRKPVKPPSSVNSSRFKIISQIAKDIYSIPISTVPSESAFSIGGRVLDSFRSSLTPQTAEPLICAHNWIQSKPLDDMTEEIDGAEEIDEVLKHSDGSTSLRTTEPDPSFRIMFLNCVSEGGGGKKKKKNPTRPEYGSGRVGQSVSDLTVHFGSDMP
Homology
[Close]
BLAST of MELO3C034801.2 vs. NCBI nr
Match: ADN33674.1 (transposase [Cucumis melo subsp. melo])

HSP 1 Score: 146.4 bits (368), Expect = 1.6e-31
Identity = 73/79 (92.41%), Postives = 76/79 (96.20%), Query Frame = 0 

Query: 152 VNSSRFKIISQIAKDIYSIPISTVPSESAFSIGGRVLDSFRSSLTPQTAEPLICAHNWIQ 211
           VN+SRFKIISQ+A+DIYSIPISTVPSESAFS GGRVLDSFRSSLTPQTAE LICA NWIQ
Sbjct: 260 VNASRFKIISQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLTPQTAEALICAQNWIQ 319

Query: 212 SKPLDDMTEEIDGAEEIDE 231
           SKPLDDMTEEIDGAEEIDE
Sbjct: 320 SKPLDDMTEEIDGAEEIDE 338

[Close]
BLAST of MELO3C034801.2 vs. NCBI nr
Match: ACX85638.1 (putative transposase [Cucumis melo])

HSP 1 Score: 146.4 bits (368), Expect = 1.6e-31
Identity = 73/79 (92.41%), Postives = 76/79 (96.20%), Query Frame = 0 

Query: 152 VNSSRFKIISQIAKDIYSIPISTVPSESAFSIGGRVLDSFRSSLTPQTAEPLICAHNWIQ 211
           VN+SRFKIISQ+A+DIYSIPISTVPSESAFS GGRVLDSFRSSLTPQTAE LICA NWIQ
Sbjct: 593 VNASRFKIISQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLTPQTAEALICAQNWIQ 652

Query: 212 SKPLDDMTEEIDGAEEIDE 231
           SKPLDDMTEEIDGAEEIDE
Sbjct: 653 SKPLDDMTEEIDGAEEIDE 671


HSP 2 Score: 63.5 bits (153), Expect = 1.4e-06
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 122 MTSFSVDETSNQSCSSPVLGKRKPVKPPSSV 153
           MTSFSVDETSNQSCSSPVLGKRKPVKPPSSV
Sbjct: 1   MTSFSVDETSNQSCSSPVLGKRKPVKPPSSV 31

[Close]
BLAST of MELO3C034801.2 vs. NCBI nr
Match: XP_008464607.1 (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 4-like [Cucumis melo])

HSP 1 Score: 142.1 bits (357), Expect = 3.0e-30
Identity = 72/79 (91.14%), Postives = 74/79 (93.67%), Query Frame = 0 

Query: 152 VNSSRFKIISQIAKDIYSIPISTVPSESAFSIGGRVLDSFRSSLTPQTAEPLICAHNWIQ 211
           VNSSRFKIISQ+A+DIY IPISTVPSESAFS GGRVLDSFRSSLTPQTAE LICA NWIQ
Sbjct: 84  VNSSRFKIISQVARDIYIIPISTVPSESAFSTGGRVLDSFRSSLTPQTAEALICAQNWIQ 143

Query: 212 SKPLDDMTEEIDGAEEIDE 231
           SKPLDDMTEEID AEEIDE
Sbjct: 144 SKPLDDMTEEIDRAEEIDE 162

[Close]
BLAST of MELO3C034801.2 vs. NCBI nr
Match: XP_022159082.1 (uncharacterized protein LOC111025523 [Momordica charantia])

HSP 1 Score: 139.8 bits (351), Expect = 1.5e-29
Identity = 67/79 (84.81%), Postives = 75/79 (94.94%), Query Frame = 0 

Query: 152 VNSSRFKIISQIAKDIYSIPISTVPSESAFSIGGRVLDSFRSSLTPQTAEPLICAHNWIQ 211
           +NSSR+KIISQ+A+DIY+IPISTVPSESAFS GGRVLDSFRSSLTPQT + LICA NW+Q
Sbjct: 87  INSSRYKIISQVARDIYNIPISTVPSESAFSTGGRVLDSFRSSLTPQTTDALICAQNWLQ 146

Query: 212 SKPLDDMTEEIDGAEEIDE 231
           SKPLDDM+EEIDGAEEIDE
Sbjct: 147 SKPLDDMSEEIDGAEEIDE 165

[Close]
BLAST of MELO3C034801.2 vs. NCBI nr
Match: XP_016899471.1 (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Cucumis melo] >XP_016899472.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Cucumis melo])

HSP 1 Score: 137.5 bits (345), Expect = 7.4e-29
Identity = 69/79 (87.34%), Postives = 72/79 (91.14%), Query Frame = 0 

Query: 152 VNSSRFKIISQIAKDIYSIPISTVPSESAFSIGGRVLDSFRSSLTPQTAEPLICAHNWIQ 211
           VNSSRFKIISQ+ +D+YSIPIS VPSE AFS GGRVL SFRSSLTPQTAEPLICA NWIQ
Sbjct: 257 VNSSRFKIISQVVRDMYSIPISIVPSEFAFSTGGRVLTSFRSSLTPQTAEPLICAQNWIQ 316

Query: 212 SKPLDDMTEEIDGAEEIDE 231
           SK LDDMTEEIDGAEEIDE
Sbjct: 317 SKTLDDMTEEIDGAEEIDE 335

[Close]
BLAST of MELO3C034801.2 vs. TAIR10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain)

HSP 1 Score: 53.9 bits (128), Expect = 1.9e-07
Identity = 22/58 (37.93%), Postives = 37/58 (63.79%), Query Frame = 0 

Query: 153 NSSRFKIISQIAKDIYSIPISTVPSESAFSIGGRVLDSFRSSLTPQTAEPLICAHNWI 211
           N  ++  +S++A+DI SIP+S    +  F +  R +D +++SL P+T E LICA  W+
Sbjct: 617 NKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEALICAREWL 674

[Close]
BLAST of MELO3C034801.2 vs. Swiss-Prot
Match: sp|P08770|TRA1_MAIZE (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 7.5e-09
Identity = 27/56 (48.21%), Postives = 41/56 (73.21%), Query Frame = 0 

Query: 155 SRFKIISQIAKDIYSIPISTVPSESAFSIGGRVLDSFRSSLTPQTAEPLICAHNWI 211
           + + I++QIA+D+ +I +STV SESAFS GGRV+D +R+ L  +  E LIC  +W+
Sbjct: 696 AEYPILTQIARDVLAIQVSTVASESAFSAGGRVVDPYRNRLGSEIVEALICTKDWV 751

[Close]
BLAST of MELO3C034801.2 vs. Swiss-Prot
Match: sp|P03010|TRAC9_MAIZE (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 7.5e-09
Identity = 27/56 (48.21%), Postives = 41/56 (73.21%), Query Frame = 0 

Query: 155 SRFKIISQIAKDIYSIPISTVPSESAFSIGGRVLDSFRSSLTPQTAEPLICAHNWI 211
           + + I++QIA+D+ +I +STV SESAFS GGRV+D +R+ L  +  E LIC  +W+
Sbjct: 665 AEYPILTQIARDVLAIQVSTVASESAFSAGGRVVDPYRNRLGSEIVEALICTKDWV 720

[Close]
BLAST of MELO3C034801.2 vs. Swiss-Prot
Match: sp|Q75HY5|RSLE3_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.4e-07
Identity = 28/67 (41.79%), Postives = 45/67 (67.16%), Query Frame = 0 

Query: 152 VNSSRFKIISQIAKDIYSIPISTVPSE----SAFSIGGRVLDSFRSSLTPQTAEPLICAH 211
           +N+ +F  +S++A+D+ +IP+S V S     SA + G ++LD +RSSL P+T E L CA 
Sbjct: 671 LNTIKFPTLSKMARDVLAIPMSMVSSGSSIFSATATGSQMLDDYRSSLRPETVEALFCAK 730

Query: 212 NWIQSKP 215
           +W+Q  P
Sbjct: 731 DWLQYPP 737

[Close]
BLAST of MELO3C034801.2 vs. Swiss-Prot
Match: sp|Q6AVI0|RSLE2_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.2e-07
Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 0 

Query: 152 VNSSRFKIISQIAKDIYSIPISTVPS-ESAFS--IGGRVLDSFRSSLTPQTAEPLICAHN 211
           +N+ +F  +S++A+DI +IP+S V S  S FS   G R+LD +RSSL P+  E L+CA +
Sbjct: 641 LNTLKFPTLSRMARDILAIPMSMVSSGNSIFSAGTGTRMLDDYRSSLRPEIVEALVCAKD 700

Query: 212 WIQSKP 215
           W+Q  P
Sbjct: 701 WLQYLP 706

[Close]
BLAST of MELO3C034801.2 vs. Swiss-Prot
Match: sp|Q0JMB2|RSLE4_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0518400 PE=2 SV=3)

HSP 1 Score: 55.5 bits (132), Expect = 1.2e-06
Identity = 26/65 (40.00%), Postives = 43/65 (66.15%), Query Frame = 0 

Query: 153 NSSRFKIISQIAKDIYSIPISTVPSESAFSI---GGRVLDSFRSSLTPQTAEPLICAHNW 212
           N+ ++  +S++A+D+ +IP+STV   S+  +   G R LD +RSSL P+  E L+CA +W
Sbjct: 620 NTLKYPTLSRMARDVLAIPMSTVGVGSSVFLPDNGSRSLDDYRSSLRPELVEALLCAKDW 679

Query: 213 IQSKP 215
           +Q  P
Sbjct: 680 LQYSP 684

[Close]
BLAST of MELO3C034801.2 vs. TrEMBL
Match: tr|D0UIX2|D0UIX2_CUCME (Putative transposase OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.0e-31
Identity = 73/79 (92.41%), Postives = 76/79 (96.20%), Query Frame = 0 

Query: 152 VNSSRFKIISQIAKDIYSIPISTVPSESAFSIGGRVLDSFRSSLTPQTAEPLICAHNWIQ 211
           VN+SRFKIISQ+A+DIYSIPISTVPSESAFS GGRVLDSFRSSLTPQTAE LICA NWIQ
Sbjct: 593 VNASRFKIISQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLTPQTAEALICAQNWIQ 652

Query: 212 SKPLDDMTEEIDGAEEIDE 231
           SKPLDDMTEEIDGAEEIDE
Sbjct: 653 SKPLDDMTEEIDGAEEIDE 671


HSP 2 Score: 63.5 bits (153), Expect = 8.9e-07
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 122 MTSFSVDETSNQSCSSPVLGKRKPVKPPSSV 153
           MTSFSVDETSNQSCSSPVLGKRKPVKPPSSV
Sbjct: 1   MTSFSVDETSNQSCSSPVLGKRKPVKPPSSV 31

[Close]
BLAST of MELO3C034801.2 vs. TrEMBL
Match: tr|E5GB32|E5GB32_CUCME (Transposase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.0e-31
Identity = 73/79 (92.41%), Postives = 76/79 (96.20%), Query Frame = 0 

Query: 152 VNSSRFKIISQIAKDIYSIPISTVPSESAFSIGGRVLDSFRSSLTPQTAEPLICAHNWIQ 211
           VN+SRFKIISQ+A+DIYSIPISTVPSESAFS GGRVLDSFRSSLTPQTAE LICA NWIQ
Sbjct: 260 VNASRFKIISQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLTPQTAEALICAQNWIQ 319

Query: 212 SKPLDDMTEEIDGAEEIDE 231
           SKPLDDMTEEIDGAEEIDE
Sbjct: 320 SKPLDDMTEEIDGAEEIDE 338

[Close]
BLAST of MELO3C034801.2 vs. TrEMBL
Match: tr|A0A1S3CNE8|A0A1S3CNE8_CUCME (zinc finger BED domain-containing protein RICESLEEPER 4-like OS=Cucumis melo OX=3656 GN=LOC103502449 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 2.0e-30
Identity = 72/79 (91.14%), Postives = 74/79 (93.67%), Query Frame = 0 

Query: 152 VNSSRFKIISQIAKDIYSIPISTVPSESAFSIGGRVLDSFRSSLTPQTAEPLICAHNWIQ 211
           VNSSRFKIISQ+A+DIY IPISTVPSESAFS GGRVLDSFRSSLTPQTAE LICA NWIQ
Sbjct: 84  VNSSRFKIISQVARDIYIIPISTVPSESAFSTGGRVLDSFRSSLTPQTAEALICAQNWIQ 143

Query: 212 SKPLDDMTEEIDGAEEIDE 231
           SKPLDDMTEEID AEEIDE
Sbjct: 144 SKPLDDMTEEIDRAEEIDE 162

[Close]
BLAST of MELO3C034801.2 vs. TrEMBL
Match: tr|A0A1S4DU07|A0A1S4DU07_CUCME (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC107990533 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 4.9e-29
Identity = 69/79 (87.34%), Postives = 72/79 (91.14%), Query Frame = 0 

Query: 152 VNSSRFKIISQIAKDIYSIPISTVPSESAFSIGGRVLDSFRSSLTPQTAEPLICAHNWIQ 211
           VNSSRFKIISQ+ +D+YSIPIS VPSE AFS GGRVL SFRSSLTPQTAEPLICA NWIQ
Sbjct: 257 VNSSRFKIISQVVRDMYSIPISIVPSEFAFSTGGRVLTSFRSSLTPQTAEPLICAQNWIQ 316

Query: 212 SKPLDDMTEEIDGAEEIDE 231
           SK LDDMTEEIDGAEEIDE
Sbjct: 317 SKTLDDMTEEIDGAEEIDE 335

[Close]
BLAST of MELO3C034801.2 vs. TrEMBL
Match: tr|A0A1S4DU44|A0A1S4DU44_CUCME (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC107990533 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 4.9e-29
Identity = 69/79 (87.34%), Postives = 72/79 (91.14%), Query Frame = 0 

Query: 152 VNSSRFKIISQIAKDIYSIPISTVPSESAFSIGGRVLDSFRSSLTPQTAEPLICAHNWIQ 211
           VNSSRFKIISQ+ +D+YSIPIS VPSE AFS GGRVL SFRSSLTPQTAEPLICA NWIQ
Sbjct: 257 VNSSRFKIISQVVRDMYSIPISIVPSEFAFSTGGRVLTSFRSSLTPQTAEPLICAQNWIQ 316

Query: 212 SKPLDDMTEEIDGAEEIDE 231
           SK LDDMTEEIDGAEEIDE
Sbjct: 317 SKTLDDMTEEIDGAEEIDE 335

The following BLAST results are available for this feature:
BLAST of MELO3C034801.2 vs. NCBI nr
Match NameE-valueIdentityDescription
ADN33674.11.6e-3192.41transposase [Cucumis melo subsp. melo][more]
ACX85638.11.6e-3192.41putative transposase [Cucumis melo][more]
XP_008464607.13.0e-3091.14PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 4-like [Cucumis... [more]
XP_022159082.11.5e-2984.81uncharacterized protein LOC111025523 [Momordica charantia][more]
XP_016899471.17.4e-2987.34PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform ... [more]
BLAST of MELO3C034801.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G42170.11.9e-0737.93BED zinc finger ;hAT family dimerisation domain[more]
BLAST of MELO3C034801.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P08770|TRA1_MAIZE7.5e-0948.21Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2[more]
sp|P03010|TRAC9_MAIZE7.5e-0948.21Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1[more]
sp|Q75HY5|RSLE3_ORYSJ1.4e-0741.79Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j... [more]
sp|Q6AVI0|RSLE2_ORYSJ3.2e-0745.45Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j... [more]
sp|Q0JMB2|RSLE4_ORYSJ1.2e-0640.00Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. j... [more]
BLAST of MELO3C034801.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|D0UIX2|D0UIX2_CUCME1.0e-3192.41Putative transposase OS=Cucumis melo OX=3656 PE=4 SV=1[more]
tr|E5GB32|E5GB32_CUCME1.0e-3192.41Transposase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S3CNE8|A0A1S3CNE8_CUCME2.0e-3091.14zinc finger BED domain-containing protein RICESLEEPER 4-like OS=Cucumis melo OX=... [more]
tr|A0A1S4DU07|A0A1S4DU07_CUCME4.9e-2987.34zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 OS=Cucum... [more]
tr|A0A1S4DU44|A0A1S4DU44_CUCME4.9e-2987.34zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 OS=Cucum... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR008906HATC_C_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034801.2.1MELO3C034801.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 152..210
e-value: 3.5E-17
score: 61.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..297
NoneNo IPR availablePANTHERPTHR23272:SF54SUBFAMILY NOT NAMEDcoord: 152..213
NoneNo IPR availablePANTHERPTHR23272BED FINGER-RELATEDcoord: 152..213
IPR012337Ribonuclease H-like superfamilySUPERFAMILYSSF53098Ribonuclease H-likecoord: 153..212

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C034801.2Cucumber (Gy14) v1cgymedB525
MELO3C034801.2Cucurbita maxima (Rimu)cmamedB573
MELO3C034801.2Cucurbita maxima (Rimu)cmamedB582
MELO3C034801.2Cucurbita maxima (Rimu)cmamedB614
MELO3C034801.2Cucurbita maxima (Rimu)cmamedB616
MELO3C034801.2Cucurbita moschata (Rifu)cmomedB561
MELO3C034801.2Cucurbita moschata (Rifu)cmomedB570
MELO3C034801.2Cucurbita moschata (Rifu)cmomedB604
MELO3C034801.2Cucurbita moschata (Rifu)cmomedB605
MELO3C034801.2Cucurbita pepo (Zucchini)cpemedB295
MELO3C034801.2Bottle gourd (USVL1VR-Ls)lsimedB049
MELO3C034801.2Watermelon (Charleston Gray)medwcgB072
MELO3C034801.2Watermelon (97103) v1medwmB083
MELO3C034801.2Silver-seed gourdcarmedB0805
MELO3C034801.2Watermelon (97103) v2medwmbB119
MELO3C034801.2Watermelon (97103) v2medwmbB123
MELO3C034801.2Wax gourdmedwgoB127