MELO3C034649.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C034649.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionZf-CCHC domain-containing protein
Locationchr11 : 8082809 .. 8083795 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAAGATTGGGTATAAAGACACTTTCATGGCACGTCTGTATACCTTGACGACATGTGGAGCTGATATCTGGAAACAGAAATTTGTCAAAGGACTACCGCACTACATCTCTAAAAAATTCTATCAAACCATGACAGCAAACTCTATCAATCAACAAATAGATTGGGCAAATCTCACCTATGAAGATATTTCATCCACAGTTCAAATGATATGTGTTAATCTCTGCACAGAGAATAAACACACAACGAAGGTGATCAAAGATTCCGACTATAGGAAAGAATTAGGCACCTTCTGTAAGCAATATGGTCTGTCTCAAGGACCGAAGGAAGAAAAGAAGAAAAAGAAAAAATATTCTTCCAAAAAATTCTTTAGAAGAAGCAAACCTAAAGATCAAGAGTCTCCTTGAAGAAGGAAGCATCATTACAACAAAGGCATAGGCAAGAAGAGATACTCTTCAAAGACCAATACGATATGCTTCAAATGCAATCAAAAGGGTCACTATGCAAATCGTTGTCCCCTAAAAGATAGAGTCAATGCCCTGACAATAGATGAAGAGACAAAGCAATCCCTTCTTTATGCCATAAGATCGGATGATGATACCTCTTCTCAAACTGAATCTTCATCAGAAGAAGATTATATCAATATTCTACAAGAAGAAGGGTCCTCTTCTGAAGAAGAATTCTACTCTCAAAGTGATTCAAGTGATGACGAAGGAGCAATACCCTGCACAGGACGATGTGCTGGTAAGTGTTCTGGCCACATTAATTTCATCACCAAGGATCAGGAAACTCTTTTTGACCTCATCGAGTAGATCCCTGATGAAGAAGCGAAAAGAACCTGCCTCCTCAAATTAAAGCAAAGTTTAGAAGAACAAGTGCCTCAAAAGACAATTCAAAATCCGATTATGTATTCGTATCAAGACATACTAAATTGAGTAAAAGGCGAAGCAAAAATACCCATTCAAGTTGAAGATCTTCATCATGAGGTAA

mRNA sequence

ATAAGATTGGGTATAAAGACACTTTCATGGCACGTCTGTATACCTTGACGACATGTGGAGCTGATATCTGGAAACAGAAATTTGTCAAAGGACTACCGCACTACATCTCTAAAAAATTCTATCAAACCATGACAGCAAACTCTATCAATCAACAAATAGATTGGGCAAATCTCACCTATGAAGATATTTCATCCACAGTTCAAATGATATGTGTTAATCTCTGCACAGAGAATAAACACACAACGAAGGTGATCAAAGATTCCGACTATAGGAAAGAATTAGGCACCTTCTGTAAGCAATATGGTCTGTCTCAAGGACCGAAGGAAGAAAAGAAGAAAAAGAAAAAATATTCTTCCAAAAAATTCTTTAGAAGAAGCAAACCTAAAGATCAAGAGTCTCCTTGAAGAAGGAAGCATCATTACAACAAAGGCATAGGCAAGAAGAGATACTCTTCAAAGACCAATACGATATGCTTCAAATGCAATCAAAAGGGTCACTATGCAAATCGTTGTCCCCTAAAAGATAGAGTCAATGCCCTGACAATAGATGAAGAGACAAAGCAATCCCTTCTTTATGCCATAAGATCGGATGATGATACCTCTTCTCAAACTGAATCTTCATCAGAAGAAGATTATATCAATATTCTACAAGAAGAAGGGTCCTCTTCTGAAGAAGAATTCTACTCTCAAAGTGATTCAAGTGATGACGAAGGAGCAATACCCTGCACAGGACGATGTGCTGGTAAGTGTTCTGGCCACATTAATTTCATCACCAAGGATCAGGAAACTCTTTTTGACCTCATCGAGTAGATCCCTGATGAAGAAGCGAAAAGAACCTGCCTCCTCAAATTAAAGCAAAGTTTAGAAGAACAAGTGCCTCAAAAGACAATTCAAAATCCGATTATGTATTCGTATCAAGACATACTAAATTGAGTAAAAGGCGAAGCAAAAATACCCATTCAAGTTGAAGATCTTCATCATGAGGTAA

Coding sequence (CDS)

ATGGCACGTCTGTATACCTTGACGACATGTGGAGCTGATATCTGGAAACAGAAATTTGTCAAAGGACTACCGCACTACATCTCTAAAAAATTCTATCAAACCATGACAGCAAACTCTATCAATCAACAAATAGATTGGGCAAATCTCACCTATGAAGATATTTCATCCACAGTTCAAATGATATGTGTTAATCTCTGCACAGAGAATAAACACACAACGAAGGTGATCAAAGATTCCGACTATAGGAAAGAATTAGGCACCTTCTGTAAGCAATATGGTCTGTCTCAAGGACCGAAGGAAGAAAAGAAGAAAAAGAAAAAATATTCTTCCAAAAAATTCTTTAGAAGAAGCAAACCTAAAGATCAAGAGTCTCCTTGA

Protein sequence

MARLYTLTTCGADIWKQKFVKGLPHYISKKFYQTMTANSINQQIDWANLTYEDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKYSSKKFFRRSKPKDQESP
Homology
[Close]
BLAST of MELO3C034649.2 vs. NCBI nr
Match: XP_022151716.1 (uncharacterized protein LOC111019629 [Momordica charantia])

HSP 1 Score: 161.4 bits (407), Expect = 2.0e-36
Identity = 71/94 (75.53%), Postives = 82/94 (87.23%), Query Frame = 0 

Query: 1   MARLYTLTTCGADIWKQKFVKGLPHYISKKFYQTMTANSINQQIDWANLTYEDISSTVQM 60
           +ARLYT+TTCGADIWKQKFV+GLPHYI++KFYQT+  NS   +IDWA LT  DI++T+Q 
Sbjct: 300 LARLYTITTCGADIWKQKFVEGLPHYIAQKFYQTVVTNSTTNRIDWAELTIGDINATIQQ 359

Query: 61  ICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGL 95
           ICVNLC ENKHT KVIK+ DYRKELGTFCKQYGL
Sbjct: 360 ICVNLCLENKHTAKVIKEPDYRKELGTFCKQYGL 393

[Close]
BLAST of MELO3C034649.2 vs. NCBI nr
Match: KRH38163.1 (hypothetical protein GLYMA_09G115500 [Glycine max])

HSP 1 Score: 70.9 bits (172), Expect = 3.6e-09
Identity = 32/100 (32.00%), Postives = 58/100 (58.00%), Query Frame = 0 

Query: 1   MARLYTLTTCGADIWKQKFVKGLPHYISKKFYQTMTANSINQQIDWANLTYEDISSTVQM 60
           +  +YT+       WK+KF+ GLP  +  K    + + S+N  I + +LTY  + S VQ 
Sbjct: 636 LTTVYTMEDSQQPFWKEKFLAGLPRSLGDKVRDKIRSQSVNGDITYESLTYGQLISYVQK 695

Query: 61  ICVNLCTENKHTTKVIKD-SDYRKELGTFCKQYGLSQGPK 100
           + + +C +NK   ++ K+ +  +++LG+FC+Q+GL   PK
Sbjct: 696 VALKICQDNKIQRQLAKEKAQTKRDLGSFCEQFGLPACPK 735

[Close]
BLAST of MELO3C034649.2 vs. NCBI nr
Match: KRH13132.1 (hypothetical protein GLYMA_15G218300 [Glycine max])

HSP 1 Score: 70.5 bits (171), Expect = 4.7e-09
Identity = 33/100 (33.00%), Postives = 59/100 (59.00%), Query Frame = 0 

Query: 1   MARLYTLTTCGADIWKQKFVKGLPHYISKKFYQTMTANSINQQIDWANLTYEDISSTVQM 60
           + R+YT        WK+KF+ GLP  +  K    + + S+N  I + +L+Y  + S VQ 
Sbjct: 213 LTRVYTREDSQQPFWKEKFLAGLPRSLRDKVRDKIHSQSVNGDIPYESLSYGQLISYVQK 272

Query: 61  ICVNLCTENKHTTKVIKD-SDYRKELGTFCKQYGLSQGPK 100
           + + +C ++K   ++ K+ +  +K+LG+FC+Q+GLS  PK
Sbjct: 273 VALKICQDDKIQRQLAKEKAQTKKDLGSFCEQFGLSACPK 312

[Close]
BLAST of MELO3C034649.2 vs. NCBI nr
Match: KRH37636.1 (hypothetical protein GLYMA_09G079200 [Glycine max])

HSP 1 Score: 69.7 bits (169), Expect = 7.9e-09
Identity = 33/100 (33.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 1   MARLYTLTTCGADIWKQKFVKGLPHYISKKFYQTMTANSINQQIDWANLTYEDISSTVQM 60
           + R+YT        WK+KF+ GLP  +  K    + + S N  I + NL+Y  + S VQ 
Sbjct: 319 LTRVYTREDSQQPFWKEKFLAGLPRSLGDKVRDKIRSQSANGDIPYENLSYGQLISYVQK 378

Query: 61  ICVNLCTENKHTTKVIKD-SDYRKELGTFCKQYGLSQGPK 100
           + + +C ++K   ++ K+ +  +K+LG+FC+Q+GL   PK
Sbjct: 379 VALKICQDDKIQRQLAKEKAQTKKDLGSFCEQFGLPACPK 418

[Close]
BLAST of MELO3C034649.2 vs. NCBI nr
Match: KRG89538.1 (hypothetical protein GLYMA_20G030000 [Glycine max])

HSP 1 Score: 69.3 bits (168), Expect = 1.0e-08
Identity = 32/100 (32.00%), Postives = 58/100 (58.00%), Query Frame = 0 

Query: 1   MARLYTLTTCGADIWKQKFVKGLPHYISKKFYQTMTANSINQQIDWANLTYEDISSTVQM 60
           + R+YT        WK+KF+ GLP  + +K    + + S N  I + +L+Y  + S VQ 
Sbjct: 123 LTRVYTREDSQQPFWKEKFLAGLPRSLGEKVRDKIRSQSANGDIPYESLSYSQLISYVQK 182

Query: 61  ICVNLCTENKHTTKVIKD-SDYRKELGTFCKQYGLSQGPK 100
           + + +C ++K   ++ K+ +  +K+LG+FC+Q+GL   PK
Sbjct: 183 VALKICQDDKIQRQLAKEKAQTKKDLGSFCEQFGLPACPK 222

[Close]
BLAST of MELO3C034649.2 vs. TrEMBL
Match: tr|A0A0R0ID04|A0A0R0ID04_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_09G115500 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.4e-09
Identity = 32/100 (32.00%), Postives = 58/100 (58.00%), Query Frame = 0 

Query: 1   MARLYTLTTCGADIWKQKFVKGLPHYISKKFYQTMTANSINQQIDWANLTYEDISSTVQM 60
           +  +YT+       WK+KF+ GLP  +  K    + + S+N  I + +LTY  + S VQ 
Sbjct: 636 LTTVYTMEDSQQPFWKEKFLAGLPRSLGDKVRDKIRSQSVNGDITYESLTYGQLISYVQK 695

Query: 61  ICVNLCTENKHTTKVIKD-SDYRKELGTFCKQYGLSQGPK 100
           + + +C +NK   ++ K+ +  +++LG+FC+Q+GL   PK
Sbjct: 696 VALKICQDNKIQRQLAKEKAQTKRDLGSFCEQFGLPACPK 735

[Close]
BLAST of MELO3C034649.2 vs. TrEMBL
Match: tr|A0A0R0G4K6|A0A0R0G4K6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_15G218300 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.1e-09
Identity = 33/100 (33.00%), Postives = 59/100 (59.00%), Query Frame = 0 

Query: 1   MARLYTLTTCGADIWKQKFVKGLPHYISKKFYQTMTANSINQQIDWANLTYEDISSTVQM 60
           + R+YT        WK+KF+ GLP  +  K    + + S+N  I + +L+Y  + S VQ 
Sbjct: 213 LTRVYTREDSQQPFWKEKFLAGLPRSLRDKVRDKIHSQSVNGDIPYESLSYGQLISYVQK 272

Query: 61  ICVNLCTENKHTTKVIKD-SDYRKELGTFCKQYGLSQGPK 100
           + + +C ++K   ++ K+ +  +K+LG+FC+Q+GLS  PK
Sbjct: 273 VALKICQDDKIQRQLAKEKAQTKKDLGSFCEQFGLSACPK 312

[Close]
BLAST of MELO3C034649.2 vs. TrEMBL
Match: tr|A0A0R0IED1|A0A0R0IED1_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_09G079200 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 5.3e-09
Identity = 33/100 (33.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 1   MARLYTLTTCGADIWKQKFVKGLPHYISKKFYQTMTANSINQQIDWANLTYEDISSTVQM 60
           + R+YT        WK+KF+ GLP  +  K    + + S N  I + NL+Y  + S VQ 
Sbjct: 319 LTRVYTREDSQQPFWKEKFLAGLPRSLGDKVRDKIRSQSANGDIPYENLSYGQLISYVQK 378

Query: 61  ICVNLCTENKHTTKVIKD-SDYRKELGTFCKQYGLSQGPK 100
           + + +C ++K   ++ K+ +  +K+LG+FC+Q+GL   PK
Sbjct: 379 VALKICQDDKIQRQLAKEKAQTKKDLGSFCEQFGLPACPK 418

[Close]
BLAST of MELO3C034649.2 vs. TrEMBL
Match: tr|A0A0R0EEK6|A0A0R0EEK6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_20G030000 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.9e-09
Identity = 32/100 (32.00%), Postives = 58/100 (58.00%), Query Frame = 0 

Query: 1   MARLYTLTTCGADIWKQKFVKGLPHYISKKFYQTMTANSINQQIDWANLTYEDISSTVQM 60
           + R+YT        WK+KF+ GLP  + +K    + + S N  I + +L+Y  + S VQ 
Sbjct: 123 LTRVYTREDSQQPFWKEKFLAGLPRSLGEKVRDKIRSQSANGDIPYESLSYSQLISYVQK 182

Query: 61  ICVNLCTENKHTTKVIKD-SDYRKELGTFCKQYGLSQGPK 100
           + + +C ++K   ++ K+ +  +K+LG+FC+Q+GL   PK
Sbjct: 183 VALKICQDDKIQRQLAKEKAQTKKDLGSFCEQFGLPACPK 222

[Close]
BLAST of MELO3C034649.2 vs. TrEMBL
Match: tr|K7M6P8|K7M6P8_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_14G141100 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 9.0e-09
Identity = 32/100 (32.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 1   MARLYTLTTCGADIWKQKFVKGLPHYISKKFYQTMTANSINQQIDWANLTYEDISSTVQM 60
           + R+YT        WK+KF+ GLP  +  K    + + S N  I + NL+Y  + S VQ 
Sbjct: 897 LTRVYTREDSQQPFWKEKFLAGLPRSLGDKVRDKIRSQSANGDIPYENLSYGQLISCVQK 956

Query: 61  ICVNLCTENKHTTKVIKD-SDYRKELGTFCKQYGLSQGPK 100
           + + +C ++K   ++ K+ +  +++LG+FC+Q+GL   PK
Sbjct: 957 VALKICQDDKIQRQLAKEKAQTKRDLGSFCEQFGLPACPK 996

The following BLAST results are available for this feature:
BLAST of MELO3C034649.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022151716.12.0e-3675.53uncharacterized protein LOC111019629 [Momordica charantia][more]
KRH38163.13.6e-0932.00hypothetical protein GLYMA_09G115500 [Glycine max][more]
KRH13132.14.7e-0933.00hypothetical protein GLYMA_15G218300 [Glycine max][more]
KRH37636.17.9e-0933.00hypothetical protein GLYMA_09G079200 [Glycine max][more]
KRG89538.11.0e-0832.00hypothetical protein GLYMA_20G030000 [Glycine max][more]
BLAST of MELO3C034649.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C034649.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C034649.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0R0ID04|A0A0R0ID04_SOYBN2.4e-0932.00Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_09G115500 PE=4 SV=1[more]
tr|A0A0R0G4K6|A0A0R0G4K6_SOYBN3.1e-0933.00Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_15G218300 PE=4 SV=1[more]
tr|A0A0R0IED1|A0A0R0IED1_SOYBN5.3e-0933.00Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_09G079200 PE=4 SV=1[more]
tr|A0A0R0EEK6|A0A0R0EEK6_SOYBN6.9e-0932.00Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_20G030000 PE=4 SV=1[more]
tr|K7M6P8|K7M6P8_SOYBN9.0e-0932.00Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_14G141100 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034649.2.1MELO3C034649.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..125

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C034649.2Cucumber (Gy14) v2cgybmedB080
MELO3C034649.2Cucumber (Gy14) v1cgymedB071
MELO3C034649.2Cucurbita maxima (Rimu)cmamedB573
MELO3C034649.2Cucurbita maxima (Rimu)cmamedB616
MELO3C034649.2Cucurbita moschata (Rifu)cmomedB561
MELO3C034649.2Cucurbita moschata (Rifu)cmomedB605
MELO3C034649.2Cucurbita pepo (Zucchini)cpemedB306
MELO3C034649.2Wild cucumber (PI 183967)cpimedB088
MELO3C034649.2Cucumber (Chinese Long) v2cumedB088
MELO3C034649.2Bottle gourd (USVL1VR-Ls)lsimedB054
MELO3C034649.2Watermelon (Charleston Gray)medwcgB088
MELO3C034649.2Watermelon (97103) v1medwmB120
MELO3C034649.2Silver-seed gourdcarmedB0941
MELO3C034649.2Cucumber (Chinese Long) v3cucmedB096
MELO3C034649.2Watermelon (97103) v2medwmbB087
MELO3C034649.2Wax gourdmedwgoB128