MELO3C034636.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C034636.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Description60S acidic ribosomal protein P0
Locationchr11 : 7403928 .. 7405185 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAACTATATTTAAGGACTTCTAATTGATAACATCAACTGCTACCAGCCTTTTAAGCTCCCCAGGAGTTGTCCAAAACCCTTAAAAACGCTTCTTAGCATTACACAGGTTAAAGAGATGGCATAGCTTTGCTGTCTGCCTTGGCAGAGCATCCAGCTTCGTCTTGTCCCTCAGTTTTGCTTTTTTTCTTTCTTTTTAACCCCCTTTTTTGTTGTATCTTAGAATTTTACCCATTTCAATGGCTATCAAACCCACCAAGGCTGAAAAGAAGGTCGCCTACGACTCCAAGTTCTGTCAGCTTCTCGATGATTATAGCCAGGTCTTGGTTGTGGCCGCTGACAATGTCGGATCCAACCAGCTCCAGAACATTAGGAAGGGTCTCTGTGGTGATTCCATTGTGCTCATGGGGAAAAACACCATGATGAAGCGCTTGGTGAGGATCCACTCTGAGCAGACTGGTAACAAGTCTTACCTCAACCTTCTTCCCTTTCTTGTGGGCAACGTTGGTTTGATCTTCACCAAGGGTGATTTGAAGGAAGTCAGTGAAGAGGTGGCCAAATACAAGGTTGGAGCCCCTGCTCGTGTTGGTTTGCTTGCTCCAATTGATGTCATCTTTCTACCAGGCAACACAGGGCTTGATCCATCTCAGACCTCTTTCTTCCAGGTTCTTAATATTCCAACCAAGATTAACAAGGATACTGTCGAAATTATCACTCCTGTGGAGCTCATTAAGAAGGGTGATAAGGTTGGATCTTCTGAGTTGTTAGAGCTGCTGCTCTCCTTGCCAAGCTAGGAATCAGGCCATTCTCATATGGTCTTGTTGTCCTCTCTGTTTATGACAATGGATCAGTCTTTAGCCCTCAGGTGCTCGATCTGACCGAGGATGATCTCCTTGAAAAGTTTTCATTGGGTGTTTCCACGGTTACATCTTTTTCGTTGGCCATTTCATACCCAACTCTGGTTGCTGCACCACACATGCTCATCAATGCATACAAAAACCTTCTTGCTGTTGCAGTTGCTACCGACTATTCCTTCCCCCAGGCTGAGAAGGTTAAAGAGTATCTTGCGGATCCTAACAAGTTTGCTGTTGCTGTGGCCGTGTCTGCTGCTGATTCTGGGTCTGCCACAGAAGCTGCTGCAGCTGTTGAGAAGAAGGAAGAGCCAGCTGAGGAGTCCGATGACGACATGGGTTTCAGCTTGTTCGATTAATCTGTATGTTAAGATATAGTAGGAGGTCCTTTTGTGTTTTGTATCTCTAA

mRNA sequence

CAAACTATATTTAAGGACTTCTAATTGATAACATCAACTGCTACCAGCCTTTTAAGCTCCCCAGGAGTTGTCCAAAACCCTTAAAAACGCTTCTTAGCATTACACAGGTTAAAGAGATGGCATAGCTTTGCTGTCTGCCTTGGCAGAGCATCCAGCTTCGTCTTGTCCCTCAGTTTTGCTTTTTTTCTTTCTTTTTAACCCCCTTTTTTGTTGTATCTTAGAATTTTACCCATTTCAATGGCTATCAAACCCACCAAGGCTGAAAAGAAGGTCGCCTACGACTCCAAGTTCTGTCAGCTTCTCGATGATTATAGCCAGGTCTTGGTTGTGGCCGCTGACAATGTCGGATCCAACCAGCTCCAGAACATTAGGAAGGGTCTCTGTGGTGATTCCATTGTGCTCATGGGGAAAAACACCATGATGAAGCGCTTGGTGAGGATCCACTCTGAGCAGACTGGTAACAAGTCTTACCTCAACCTTCTTCCCTTTCTTGTGGGCAACGTTGGTTTGATCTTCACCAAGGGTGATTTGAAGGAAGTCAGTGAAGAGGTGGCCAAATACAAGGTTGGAGCCCCTGCTCGTGTTGGTTTGCTTGCTCCAATTGATGTCATCTTTCTACCAGGCAACACAGGGCTTGATCCATCTCAGACCTCTTTCTTCCAGGTTCTTAATATTCCAACCAAGATTAACAAGGATACTGTCGAAATTATCACTCCTGTGGAGCTCATTAAGAAGGGTGATAAGGTTGGATCTTCTGAGTTGTTAGAGCTGCTGCTCTCCTTGCCAAGCTAGGAATCAGGCCATTCTCATATGGTCTTGTTGTCCTCTCTGTTTATGACAATGGATCAGTCTTTAGCCCTCAGGTGCTCGATCTGACCGAGGATGATCTCCTTGAAAAGTTTTCATTGGGTGTTTCCACGGTTACATCTTTTTCGTTGGCCATTTCATACCCAACTCTGGTTGCTGCACCACACATGCTCATCAATGCATACAAAAACCTTCTTGCTGTTGCAGTTGCTACCGACTATTCCTTCCCCCAGGCTGAGAAGGTTAAAGAGTATCTTGCGGATCCTAACAAGTTTGCTGTTGCTGTGGCCGTGTCTGCTGCTGATTCTGGGTCTGCCACAGAAGCTGCTGCAGCTGTTGAGAAGAAGGAAGAGCCAGCTGAGGAGTCCGATGACGACATGGGTTTCAGCTTGTTCGATTAATCTGTATGTTAAGATATAGTAGGAGGTCCTTTTGTGTTTTGTATCTCTAA

Coding sequence (CDS)

ATGGCTATCAAACCCACCAAGGCTGAAAAGAAGGTCGCCTACGACTCCAAGTTCTGTCAGCTTCTCGATGATTATAGCCAGGTCTTGGTTGTGGCCGCTGACAATGTCGGATCCAACCAGCTCCAGAACATTAGGAAGGGTCTCTGTGGTGATTCCATTGTGCTCATGGGGAAAAACACCATGATGAAGCGCTTGGTGAGGATCCACTCTGAGCAGACTGGTAACAAGTCTTACCTCAACCTTCTTCCCTTTCTTGTGGGCAACGTTGGTTTGATCTTCACCAAGGGTGATTTGAAGGAAGTCAGTGAAGAGGTGGCCAAATACAAGGTTGGAGCCCCTGCTCGTGTTGGTTTGCTTGCTCCAATTGATGTCATCTTTCTACCAGGCAACACAGGGCTTGATCCATCTCAGACCTCTTTCTTCCAGGTTCTTAATATTCCAACCAAGATTAACAAGGATACTGTCGAAATTATCACTCCTGTGGAGCTCATTAAGAAGGGTGATAAGGTTGGATCTTCTGAGTTGTTAGAGCTGCTGCTCTCCTTGCCAAGCTAG

Protein sequence

MAIKPTKAEKKVAYDSKFCQLLDDYSQVLVVAADNVGSNQLQNIRKGLCGDSIVLMGKNTMMKRLVRIHSEQTGNKSYLNLLPFLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLLAPIDVIFLPGNTGLDPSQTSFFQVLNIPTKINKDTVEIITPVELIKKGDKVGSSELLELLLSLPS
Homology
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BLAST of MELO3C034636.2 vs. NCBI nr
Match: XP_004149240.1 (PREDICTED: 60S acidic ribosomal protein P0 [Cucumis sativus] >KGN50643.1 60S acidic ribosomal protein PO [Cucumis sativus])

HSP 1 Score: 318.5 bits (815), Expect = 1.4e-83
Identity = 164/174 (94.25%), Postives = 167/174 (95.98%), Query Frame = 0 

Query: 1   MAIKPTKAEKKVAYDSKFCQLLDDYSQVLVVAADNVGSNQLQNIRKGLCGDSIVLMGKNT 60
           MAIKPTKAEKKVAYDSK CQLLD+YSQVLVVAADNVGSNQLQNIRKGL GDSIVLMGKNT
Sbjct: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRLVRIHSEQTGNKSYLNLLPFLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLLA 120
           MMKR VRIHSEQTGNK+YLNLLP LVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGL+A
Sbjct: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIFLPGNTGLDPSQTSFFQVLNIPTKINKDTVEIITPVELIKKGDKVGSSE 175
           PIDVI  PGNTGLDPSQTSFFQVLNIPTKINK TVEIITPVELIKKGDKVGSSE
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSE 174

[Close]
BLAST of MELO3C034636.2 vs. NCBI nr
Match: XP_008463223.1 (PREDICTED: 60S acidic ribosomal protein P0 [Cucumis melo])

HSP 1 Score: 318.5 bits (815), Expect = 1.4e-83
Identity = 164/174 (94.25%), Postives = 167/174 (95.98%), Query Frame = 0 

Query: 1   MAIKPTKAEKKVAYDSKFCQLLDDYSQVLVVAADNVGSNQLQNIRKGLCGDSIVLMGKNT 60
           MAIKPTKAEKKVAYDSK CQLLD+YSQVLVVAADNVGSNQLQNIRKGL GDSIVLMGKNT
Sbjct: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRLVRIHSEQTGNKSYLNLLPFLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLLA 120
           MMKR VRIHSEQTGNK+YLNLLP LVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGL+A
Sbjct: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIFLPGNTGLDPSQTSFFQVLNIPTKINKDTVEIITPVELIKKGDKVGSSE 175
           PIDVI  PGNTGLDPSQTSFFQVLNIPTKINK TVEIITPVELIKKGDKVGSSE
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSE 174

[Close]
BLAST of MELO3C034636.2 vs. NCBI nr
Match: XP_022156911.1 (60S acidic ribosomal protein P0 [Momordica charantia])

HSP 1 Score: 313.2 bits (801), Expect = 6.1e-82
Identity = 158/174 (90.80%), Postives = 167/174 (95.98%), Query Frame = 0 

Query: 1   MAIKPTKAEKKVAYDSKFCQLLDDYSQVLVVAADNVGSNQLQNIRKGLCGDSIVLMGKNT 60
           MA+KPTKAEKKVAYDSK CQLLD+YSQVL+VAADNVGSNQLQNIRKGL GDS+VLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRLVRIHSEQTGNKSYLNLLPFLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLLA 120
           MMKR VR+HSE+TGNK+YLNLLP LVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGL+A
Sbjct: 61  MMKRSVRMHSEKTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIFLPGNTGLDPSQTSFFQVLNIPTKINKDTVEIITPVELIKKGDKVGSSE 175
           PIDVI  PGNTGLDPSQTSFFQVLNIPTKINK TVEIITPVELIKKG+KVGSSE
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSE 174

[Close]
BLAST of MELO3C034636.2 vs. NCBI nr
Match: XP_022957404.1 (60S acidic ribosomal protein P0 [Cucurbita moschata])

HSP 1 Score: 312.8 bits (800), Expect = 7.9e-82
Identity = 158/174 (90.80%), Postives = 166/174 (95.40%), Query Frame = 0 

Query: 1   MAIKPTKAEKKVAYDSKFCQLLDDYSQVLVVAADNVGSNQLQNIRKGLCGDSIVLMGKNT 60
           MA+KPTKAEKKVAYDSK CQLLD+YSQVL+VAADNVGSNQLQNIRKGL GDS+VLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRLVRIHSEQTGNKSYLNLLPFLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLLA 120
           MMKR VRIH+E TGNK+YLNLLP LVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGL+A
Sbjct: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIFLPGNTGLDPSQTSFFQVLNIPTKINKDTVEIITPVELIKKGDKVGSSE 175
           PIDVI  PGNTGLDPSQTSFFQVLNIPTKINK TVEIITPVELIKKG+KVGSSE
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSE 174

[Close]
BLAST of MELO3C034636.2 vs. NCBI nr
Match: XP_022987157.1 (60S acidic ribosomal protein P0 [Cucurbita maxima])

HSP 1 Score: 312.8 bits (800), Expect = 7.9e-82
Identity = 158/174 (90.80%), Postives = 166/174 (95.40%), Query Frame = 0 

Query: 1   MAIKPTKAEKKVAYDSKFCQLLDDYSQVLVVAADNVGSNQLQNIRKGLCGDSIVLMGKNT 60
           MA+KPTKAEKKVAYDSK CQLLD+YSQVL+VAADNVGSNQLQNIRKGL GDS+VLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRLVRIHSEQTGNKSYLNLLPFLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLLA 120
           MMKR VRIH+E TGNK+YLNLLP LVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGL+A
Sbjct: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIFLPGNTGLDPSQTSFFQVLNIPTKINKDTVEIITPVELIKKGDKVGSSE 175
           PIDVI  PGNTGLDPSQTSFFQVLNIPTKINK TVEIITPVELIKKG+KVGSSE
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSE 174

[Close]
BLAST of MELO3C034636.2 vs. TAIR10
Match: AT2G40010.1 (Ribosomal protein L10 family protein)

HSP 1 Score: 297.0 bits (759), Expect = 8.2e-81
Identity = 148/174 (85.06%), Postives = 163/174 (93.68%), Query Frame = 0 

Query: 1   MAIKPTKAEKKVAYDSKFCQLLDDYSQVLVVAADNVGSNQLQNIRKGLCGDSIVLMGKNT 60
           MA+K TKAEKK+ YDSK CQLL++YSQ+LVVAADNVGS QLQNIRKGL GDS+VLMGKNT
Sbjct: 1   MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRLVRIHSEQTGNKSYLNLLPFLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLLA 120
           MMKR VRIH+++TGN+++L+LLP L GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGL+A
Sbjct: 61  MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIFLPGNTGLDPSQTSFFQVLNIPTKINKDTVEIITPVELIKKGDKVGSSE 175
           PIDV+  PGNTGLDPSQTSFFQVLNIPTKINK TVEIITPVELIKKGDKVGSSE
Sbjct: 121 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSE 174

[Close]
BLAST of MELO3C034636.2 vs. TAIR10
Match: AT3G09200.1 (Ribosomal protein L10 family protein)

HSP 1 Score: 293.9 bits (751), Expect = 6.9e-80
Identity = 147/172 (85.47%), Postives = 159/172 (92.44%), Query Frame = 0 

Query: 3   IKPTKAEKKVAYDSKFCQLLDDYSQVLVVAADNVGSNQLQNIRKGLCGDSIVLMGKNTMM 62
           +K TKAEKK+AYD+K CQL+D+Y+Q+LVVAADNVGS QLQNIRKGL GDS+VLMGKNTMM
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61

Query: 63  KRLVRIHSEQTGNKSYLNLLPFLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLLAPI 122
           KR VRIHSE TGN + LNLLP L GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGL+API
Sbjct: 62  KRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121

Query: 123 DVIFLPGNTGLDPSQTSFFQVLNIPTKINKDTVEIITPVELIKKGDKVGSSE 175
           DV+  PGNTGLDPSQTSFFQVLNIPTKINK TVEIITPVELIK+GDKVGSSE
Sbjct: 122 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSE 173

[Close]
BLAST of MELO3C034636.2 vs. TAIR10
Match: AT3G11250.1 (Ribosomal protein L10 family protein)

HSP 1 Score: 292.4 bits (747), Expect = 2.0e-79
Identity = 146/172 (84.88%), Postives = 159/172 (92.44%), Query Frame = 0 

Query: 3   IKPTKAEKKVAYDSKFCQLLDDYSQVLVVAADNVGSNQLQNIRKGLCGDSIVLMGKNTMM 62
           +K TKAEKK+AYD+K CQL+D+Y+Q+LVVAADNVGS QLQNIRKGL GDS+VLMGKNTMM
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61

Query: 63  KRLVRIHSEQTGNKSYLNLLPFLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLLAPI 122
           KR VRIHSE +GN + LNLLP L GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGL+API
Sbjct: 62  KRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121

Query: 123 DVIFLPGNTGLDPSQTSFFQVLNIPTKINKDTVEIITPVELIKKGDKVGSSE 175
           DV+  PGNTGLDPSQTSFFQVLNIPTKINK TVEIITPVELIK+GDKVGSSE
Sbjct: 122 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSE 173

[Close]
BLAST of MELO3C034636.2 vs. Swiss-Prot
Match: sp|O04204|RLA01_ARATH (60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana OX=3702 GN=RPP0A PE=1 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 1.5e-79
Identity = 148/174 (85.06%), Postives = 163/174 (93.68%), Query Frame = 0 

Query: 1   MAIKPTKAEKKVAYDSKFCQLLDDYSQVLVVAADNVGSNQLQNIRKGLCGDSIVLMGKNT 60
           MA+K TKAEKK+ YDSK CQLL++YSQ+LVVAADNVGS QLQNIRKGL GDS+VLMGKNT
Sbjct: 1   MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRLVRIHSEQTGNKSYLNLLPFLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLLA 120
           MMKR VRIH+++TGN+++L+LLP L GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGL+A
Sbjct: 61  MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIFLPGNTGLDPSQTSFFQVLNIPTKINKDTVEIITPVELIKKGDKVGSSE 175
           PIDV+  PGNTGLDPSQTSFFQVLNIPTKINK TVEIITPVELIKKGDKVGSSE
Sbjct: 121 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSE 174

[Close]
BLAST of MELO3C034636.2 vs. Swiss-Prot
Match: sp|Q42112|RLA02_ARATH (60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana OX=3702 GN=RPP0B PE=1 SV=2)

HSP 1 Score: 293.9 bits (751), Expect = 1.2e-78
Identity = 147/172 (85.47%), Postives = 159/172 (92.44%), Query Frame = 0 

Query: 3   IKPTKAEKKVAYDSKFCQLLDDYSQVLVVAADNVGSNQLQNIRKGLCGDSIVLMGKNTMM 62
           +K TKAEKK+AYD+K CQL+D+Y+Q+LVVAADNVGS QLQNIRKGL GDS+VLMGKNTMM
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61

Query: 63  KRLVRIHSEQTGNKSYLNLLPFLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLLAPI 122
           KR VRIHSE TGN + LNLLP L GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGL+API
Sbjct: 62  KRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121

Query: 123 DVIFLPGNTGLDPSQTSFFQVLNIPTKINKDTVEIITPVELIKKGDKVGSSE 175
           DV+  PGNTGLDPSQTSFFQVLNIPTKINK TVEIITPVELIK+GDKVGSSE
Sbjct: 122 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSE 173

[Close]
BLAST of MELO3C034636.2 vs. Swiss-Prot
Match: sp|P50346|RLA0_SOYBN (60S acidic ribosomal protein P0 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.1e-78
Identity = 145/174 (83.33%), Postives = 161/174 (92.53%), Query Frame = 0 

Query: 1   MAIKPTKAEKKVAYDSKFCQLLDDYSQVLVVAADNVGSNQLQNIRKGLCGDSIVLMGKNT 60
           MA K TKAEKK+AYD+K C L+++Y Q+LVV +DNVGSNQLQNIRKGL GDS+VLMGKNT
Sbjct: 1   MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRLVRIHSEQTGNKSYLNLLPFLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLLA 120
           MMKR VR+H+E+TGN +YLNL+P LVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGL+A
Sbjct: 61  MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIFLPGNTGLDPSQTSFFQVLNIPTKINKDTVEIITPVELIKKGDKVGSSE 175
           PIDV+  PGNTGLDPSQTSFFQVLNIPTKINK TVEIITPVELI+KGDKVGSSE
Sbjct: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSE 174

[Close]
BLAST of MELO3C034636.2 vs. Swiss-Prot
Match: sp|P57691|RLA03_ARATH (60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana OX=3702 GN=RPP0C PE=1 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 3.6e-78
Identity = 146/172 (84.88%), Postives = 159/172 (92.44%), Query Frame = 0 

Query: 3   IKPTKAEKKVAYDSKFCQLLDDYSQVLVVAADNVGSNQLQNIRKGLCGDSIVLMGKNTMM 62
           +K TKAEKK+AYD+K CQL+D+Y+Q+LVVAADNVGS QLQNIRKGL GDS+VLMGKNTMM
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61

Query: 63  KRLVRIHSEQTGNKSYLNLLPFLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLLAPI 122
           KR VRIHSE +GN + LNLLP L GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGL+API
Sbjct: 62  KRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121

Query: 123 DVIFLPGNTGLDPSQTSFFQVLNIPTKINKDTVEIITPVELIKKGDKVGSSE 175
           DV+  PGNTGLDPSQTSFFQVLNIPTKINK TVEIITPVELIK+GDKVGSSE
Sbjct: 122 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSE 173

[Close]
BLAST of MELO3C034636.2 vs. Swiss-Prot
Match: sp|P41095|RLA0_ORYSJ (60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0130500 PE=1 SV=3)

HSP 1 Score: 287.7 bits (735), Expect = 8.9e-77
Identity = 141/174 (81.03%), Postives = 158/174 (90.80%), Query Frame = 0 

Query: 1   MAIKPTKAEKKVAYDSKFCQLLDDYSQVLVVAADNVGSNQLQNIRKGLCGDSIVLMGKNT 60
           MAIK TKAEKKVAYD K CQLLD+Y++VL+  ADNVGSNQLQ IRKGL GDSIVLMGKNT
Sbjct: 1   MAIKRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRLVRIHSEQTGNKSYLNLLPFLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLLA 120
           +++R +++H++ TGNK +L L+P LVGNVGLIFTKGDLKEV EEVAKYKVGAPARVGL+A
Sbjct: 61  LIRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIFLPGNTGLDPSQTSFFQVLNIPTKINKDTVEIITPVELIKKGDKVGSSE 175
           P+DV+  PGNTGLDPSQTSFFQVLNIPTKINK TVEIITPVELIKKGDKVGSSE
Sbjct: 121 PVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSE 174

[Close]
BLAST of MELO3C034636.2 vs. TrEMBL
Match: tr|A0A1S3CIR4|A0A1S3CIR4_CUCME (60S acidic ribosomal protein P0 OS=Cucumis melo OX=3656 GN=LOC103501429 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 9.6e-84
Identity = 164/174 (94.25%), Postives = 167/174 (95.98%), Query Frame = 0 

Query: 1   MAIKPTKAEKKVAYDSKFCQLLDDYSQVLVVAADNVGSNQLQNIRKGLCGDSIVLMGKNT 60
           MAIKPTKAEKKVAYDSK CQLLD+YSQVLVVAADNVGSNQLQNIRKGL GDSIVLMGKNT
Sbjct: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRLVRIHSEQTGNKSYLNLLPFLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLLA 120
           MMKR VRIHSEQTGNK+YLNLLP LVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGL+A
Sbjct: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIFLPGNTGLDPSQTSFFQVLNIPTKINKDTVEIITPVELIKKGDKVGSSE 175
           PIDVI  PGNTGLDPSQTSFFQVLNIPTKINK TVEIITPVELIKKGDKVGSSE
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSE 174

[Close]
BLAST of MELO3C034636.2 vs. TrEMBL
Match: tr|A0A0A0KM27|A0A0A0KM27_CUCSA (60S acidic ribosomal protein P0 OS=Cucumis sativus OX=3659 GN=Csa_5G199310 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 9.6e-84
Identity = 164/174 (94.25%), Postives = 167/174 (95.98%), Query Frame = 0 

Query: 1   MAIKPTKAEKKVAYDSKFCQLLDDYSQVLVVAADNVGSNQLQNIRKGLCGDSIVLMGKNT 60
           MAIKPTKAEKKVAYDSK CQLLD+YSQVLVVAADNVGSNQLQNIRKGL GDSIVLMGKNT
Sbjct: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRLVRIHSEQTGNKSYLNLLPFLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLLA 120
           MMKR VRIHSEQTGNK+YLNLLP LVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGL+A
Sbjct: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIFLPGNTGLDPSQTSFFQVLNIPTKINKDTVEIITPVELIKKGDKVGSSE 175
           PIDVI  PGNTGLDPSQTSFFQVLNIPTKINK TVEIITPVELIKKGDKVGSSE
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSE 174

[Close]
BLAST of MELO3C034636.2 vs. TrEMBL
Match: tr|A0A1S2Y8Z9|A0A1S2Y8Z9_CICAR (60S acidic ribosomal protein P0 OS=Cicer arietinum OX=3827 GN=LOC101504382 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.3e-80
Identity = 153/174 (87.93%), Postives = 165/174 (94.83%), Query Frame = 0 

Query: 1   MAIKPTKAEKKVAYDSKFCQLLDDYSQVLVVAADNVGSNQLQNIRKGLCGDSIVLMGKNT 60
           MA+KPTKAEKK+AYDSK CQLLDDYSQ+LVV ADNVGSNQLQ+IR GL GDS+VLMGKNT
Sbjct: 1   MAVKPTKAEKKIAYDSKLCQLLDDYSQILVVHADNVGSNQLQSIRSGLRGDSVVLMGKNT 60

Query: 61  MMKRLVRIHSEQTGNKSYLNLLPFLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLLA 120
           MMKR +RIH+EQTGNK++LNL+P LVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGL+A
Sbjct: 61  MMKRSIRIHAEQTGNKTFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIFLPGNTGLDPSQTSFFQVLNIPTKINKDTVEIITPVELIKKGDKVGSSE 175
           PIDV+  PGNTGLDPSQTSFFQVLNIPTKINK TVEIITPVELIKKGDKVGSSE
Sbjct: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSE 174

[Close]
BLAST of MELO3C034636.2 vs. TrEMBL
Match: tr|A0A2I4ER37|A0A2I4ER37_9ROSI (60S acidic ribosomal protein P0 OS=Juglans regia OX=51240 GN=LOC108991896 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 3.8e-80
Identity = 152/174 (87.36%), Postives = 166/174 (95.40%), Query Frame = 0 

Query: 1   MAIKPTKAEKKVAYDSKFCQLLDDYSQVLVVAADNVGSNQLQNIRKGLCGDSIVLMGKNT 60
           MA+KPTK+EKKVAYD+K CQLLD+Y+Q+LVVAADNVGSNQLQNIRKGL GDS+VLMGKNT
Sbjct: 1   MAVKPTKSEKKVAYDTKLCQLLDEYTQILVVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRLVRIHSEQTGNKSYLNLLPFLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLLA 120
           MMKR VRIH+E TGN+++LNL+P LVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGL+A
Sbjct: 61  MMKRSVRIHAENTGNQAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIFLPGNTGLDPSQTSFFQVLNIPTKINKDTVEIITPVELIKKGDKVGSSE 175
           PIDV+  PGNTGLDPSQTSFFQVLNIPTKINK TVEIITPVELIKKGDKVGSSE
Sbjct: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSE 174

[Close]
BLAST of MELO3C034636.2 vs. TrEMBL
Match: tr|A0A2P5FBN1|A0A2P5FBN1_9ROSA (60S acidic ribosomal protein P0 OS=Trema orientalis OX=63057 GN=TorRG33x02_090930 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.9e-79
Identity = 150/171 (87.72%), Postives = 164/171 (95.91%), Query Frame = 0 

Query: 4   KPTKAEKKVAYDSKFCQLLDDYSQVLVVAADNVGSNQLQNIRKGLCGDSIVLMGKNTMMK 63
           KP+KAEKK+AYD+K CQLL+DY+QVL+VAADNVGSNQLQNIRKGL GDS+VLMGKNTMMK
Sbjct: 3   KPSKAEKKIAYDAKLCQLLEDYTQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNTMMK 62

Query: 64  RLVRIHSEQTGNKSYLNLLPFLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLLAPID 123
           R +RIHSE+TGN++YLNL+P LVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGL+APID
Sbjct: 63  RSIRIHSEKTGNQAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLIAPID 122

Query: 124 VIFLPGNTGLDPSQTSFFQVLNIPTKINKDTVEIITPVELIKKGDKVGSSE 175
           V+  PGNTGLDPSQTSFFQVLNIPTKINK TVEIITPVELIKKGDKVGSSE
Sbjct: 123 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSE 173

The following BLAST results are available for this feature:
BLAST of MELO3C034636.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004149240.11.4e-8394.25PREDICTED: 60S acidic ribosomal protein P0 [Cucumis sativus] >KGN50643.1 60S aci... [more]
XP_008463223.11.4e-8394.25PREDICTED: 60S acidic ribosomal protein P0 [Cucumis melo][more]
XP_022156911.16.1e-8290.8060S acidic ribosomal protein P0 [Momordica charantia][more]
XP_022957404.17.9e-8290.8060S acidic ribosomal protein P0 [Cucurbita moschata][more]
XP_022987157.17.9e-8290.8060S acidic ribosomal protein P0 [Cucurbita maxima][more]
BLAST of MELO3C034636.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G40010.18.2e-8185.06Ribosomal protein L10 family protein[more]
AT3G09200.16.9e-8085.47Ribosomal protein L10 family protein[more]
AT3G11250.12.0e-7984.88Ribosomal protein L10 family protein[more]
BLAST of MELO3C034636.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O04204|RLA01_ARATH1.5e-7985.0660S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana OX=3702 GN=RPP0A PE=1 ... [more]
sp|Q42112|RLA02_ARATH1.2e-7885.4760S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana OX=3702 GN=RPP0B PE=1 ... [more]
sp|P50346|RLA0_SOYBN2.1e-7883.3360S acidic ribosomal protein P0 OS=Glycine max OX=3847 PE=2 SV=1[more]
sp|P57691|RLA03_ARATH3.6e-7884.8860S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana OX=3702 GN=RPP0C PE=1 ... [more]
sp|P41095|RLA0_ORYSJ8.9e-7781.0360S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08... [more]
BLAST of MELO3C034636.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CIR4|A0A1S3CIR4_CUCME9.6e-8494.2560S acidic ribosomal protein P0 OS=Cucumis melo OX=3656 GN=LOC103501429 PE=3 SV=... [more]
tr|A0A0A0KM27|A0A0A0KM27_CUCSA9.6e-8494.2560S acidic ribosomal protein P0 OS=Cucumis sativus OX=3659 GN=Csa_5G199310 PE=3 ... [more]
tr|A0A1S2Y8Z9|A0A1S2Y8Z9_CICAR1.3e-8087.9360S acidic ribosomal protein P0 OS=Cicer arietinum OX=3827 GN=LOC101504382 PE=3 ... [more]
tr|A0A2I4ER37|A0A2I4ER37_9ROSI3.8e-8087.3660S acidic ribosomal protein P0 OS=Juglans regia OX=51240 GN=LOC108991896 PE=3 S... [more]
tr|A0A2P5FBN1|A0A2P5FBN1_9ROSA1.9e-7987.7260S acidic ribosomal protein P0 OS=Trema orientalis OX=63057 GN=TorRG33x02_09093... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
Vocabulary: INTERPRO
TermDefinition
IPR001790Ribosomal_L10P
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034636.2.1MELO3C034636.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001790Ribosomal protein L10PPFAMPF00466Ribosomal_L10coord: 8..108
e-value: 1.2E-17
score: 63.8
NoneNo IPR availableGENE3DG3DSA:3.30.70.1730coord: 5..150
e-value: 6.6E-46
score: 157.5
NoneNo IPR availablePANTHERPTHR21141:SF74SUBFAMILY NOT NAMEDcoord: 1..169
NoneNo IPR availablePANTHERPTHR2114160S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBERcoord: 1..169
NoneNo IPR availableCDDcd05795Ribosomal_P0_L10ecoord: 9..171
e-value: 1.68637E-68
score: 207.811
NoneNo IPR availableSUPERFAMILYSSF160369Ribosomal protein L10-likecoord: 8..133

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C034636.2Watermelon (97103) v2medwmbB087
MELO3C034636.2Wax gourdmedwgoB128
MELO3C034636.2Wax gourdmedwgoB139
MELO3C034636.2Cucumber (Gy14) v2cgybmedB080
MELO3C034636.2Cucumber (Gy14) v1cgymedB435
MELO3C034636.2Cucurbita maxima (Rimu)cmamedB573
MELO3C034636.2Cucurbita maxima (Rimu)cmamedB616
MELO3C034636.2Cucurbita moschata (Rifu)cmomedB561
MELO3C034636.2Cucurbita moschata (Rifu)cmomedB605
MELO3C034636.2Cucurbita pepo (Zucchini)cpemedB306
MELO3C034636.2Cucurbita pepo (Zucchini)cpemedB806
MELO3C034636.2Wild cucumber (PI 183967)cpimedB088
MELO3C034636.2Cucumber (Chinese Long) v2cumedB088
MELO3C034636.2Bottle gourd (USVL1VR-Ls)lsimedB054
MELO3C034636.2Watermelon (Charleston Gray)medwcgB088
MELO3C034636.2Watermelon (97103) v1medwmB120
MELO3C034636.2Silver-seed gourdcarmedB0941
MELO3C034636.2Silver-seed gourdcarmedB1034
MELO3C034636.2Cucumber (Chinese Long) v3cucmedB096