MELO3C034627.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C034627.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr11 : 6330712 .. 6330878 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGAGGGAGAAAATGGCAACGATCGATCGGGTGGTGGAGGGAGAAAACGGCGACGATGGTGGAAGGAGAAAACGGCTGAGGTCGATCAGTTGGTGGAGGGAGAAAACGGCAACGATGGTGGATGCCGCCTCCGGAGGGAGAGAACGGCTGAGGTCGGACGGCTTTGA

mRNA sequence

TGGAGGGAGAAAATGGCAACGATCGATCGGGTGGTGGAGGGAGAAAACGGCGACGATGGTGGAAGGAGAAAACGGCTGAGGTCGATCAGTTGGTGGAGGGAGAAAACGGCAACGATGGTGGATGCCGCCTCCGGAGGGAGAGAACGGCTGAGGTCGGACGGCTTTGA

Coding sequence (CDS)

ATGGCAACGATCGATCGGGTGGTGGAGGGAGAAAACGGCGACGATGGTGGAAGGAGAAAACGGCTGAGGTCGATCAGTTGGTGGAGGGAGAAAACGGCAACGATGGTGGATGCCGCCTCCGGAGGGAGAGAACGGCTGAGGTCGGACGGCTTT

Protein sequence

MATIDRVVEGENGDDGGRRKRLRSISWWREKTATMVDAASGGRERLRSDGF
Homology
[Close]
BLAST of MELO3C034627.2 vs. NCBI nr
Match: ADN34082.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 79.0 bits (193), Expect = 5.3e-12
Identity = 38/45 (84.44%), Postives = 39/45 (86.67%), Query Frame = 0 

Query: 7  VVEGENGDDGGRRKRLRSISWWREKTATMVDAASGGRERLRSDGF 52
          +VEGENGDDGGRRKRLRSI WWREK ATMVD   GGRERLR DGF
Sbjct: 1  MVEGENGDDGGRRKRLRSIGWWREKMATMVD--GGGRERLRLDGF 43

[Close]
BLAST of MELO3C034627.2 vs. TrEMBL
Match: tr|E5GC83|E5GC83_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.5e-12
Identity = 38/45 (84.44%), Postives = 39/45 (86.67%), Query Frame = 0 

Query: 7  VVEGENGDDGGRRKRLRSISWWREKTATMVDAASGGRERLRSDGF 52
          +VEGENGDDGGRRKRLRSI WWREK ATMVD   GGRERLR DGF
Sbjct: 1  MVEGENGDDGGRRKRLRSIGWWREKMATMVD--GGGRERLRLDGF 43

The following BLAST results are available for this feature:
BLAST of MELO3C034627.2 vs. NCBI nr
Match NameE-valueIdentityDescription
ADN34082.15.3e-1284.44hypothetical protein [Cucumis melo subsp. melo][more]
BLAST of MELO3C034627.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C034627.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C034627.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|E5GC83|E5GC83_CUCME3.5e-1284.44Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034627.2.1MELO3C034627.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C034627.2Cucumber (Gy14) v2cgybmedB076
MELO3C034627.2Cucumber (Gy14) v1cgymedB526
MELO3C034627.2Cucurbita maxima (Rimu)cmamedB582
MELO3C034627.2Cucurbita maxima (Rimu)cmamedB614
MELO3C034627.2Cucurbita moschata (Rifu)cmomedB570
MELO3C034627.2Cucurbita moschata (Rifu)cmomedB604
MELO3C034627.2Cucurbita pepo (Zucchini)cpemedB295
MELO3C034627.2Cucurbita pepo (Zucchini)cpemedB796
MELO3C034627.2Wild cucumber (PI 183967)cpimedB084
MELO3C034627.2Cucumber (Chinese Long) v2cumedB084
MELO3C034627.2Bottle gourd (USVL1VR-Ls)lsimedB049
MELO3C034627.2Watermelon (Charleston Gray)medwcgB072
MELO3C034627.2Watermelon (97103) v1medwmB083
MELO3C034627.2Silver-seed gourdcarmedB0805
MELO3C034627.2Silver-seed gourdcarmedB1033
MELO3C034627.2Silver-seed gourdcarmedB1035
MELO3C034627.2Cucumber (Chinese Long) v3cucmedB091
MELO3C034627.2Watermelon (97103) v2medwmbB119
MELO3C034627.2Watermelon (97103) v2medwmbB123
MELO3C034627.2Wax gourdmedwgoB127