MELO3C034561.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C034561.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionMLO-like protein 13
Locationchr11 : 341770 .. 342507 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAATTGAAGAAGTATTTTGTTGTTGGAAAATAATTAATAATGGATGGAAGAGGGAATAATTACAATAATAATAATGTTCATGATCATCAACCTCCAAATGCAAGGTTTGAGTTCACTCCAACATGGATCATTGCTGTTGTTTCATCCATTATCGTTATCATTTCCTTCTCTCTTGAGCGTGGCCTTCATTGGCTTGGACAGGTTCTTTTACATAACAATACCTTTCACATTTTTTACTTCCTTTATTTCTTTATATTTTCTCTATTACACTCTTCATATATTTTTTATTTAATATATAGTTACGTACTACTCTGTACTTTTGTCGAATTTGATTCATTATTTCAGGGGTTTTGTACTTCTACAAATGTGCGTTTTGTTGATGTGCTTTTATATATCTAGTAGCATCTAAATACGTTAATTAATGAAGCAATAATACAATAGAAAATTTTTATTAACAAACATGTTTTATAATGTGAGTTTTTAGCTTAATGTATATATATATATATGCACAACACAAATGACATTTATTTACCTTTTTCTAATGTGGTTATTTCTTTGATTCAGAAGTTGAAACATAAACAGATGGATGAACTAAATCATGCGTTGCTGAAGTTAGAAGAAGGTTTTTTCTCAACATTATCACCTTTTTCTTTTTGTTTTTTTTTTCTATAGTTCACTCTGAGTGTAGCTTCTAATACTTAG

mRNA sequence

GAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAATTGAAGAAGTATTTTGTTGTTGGAAAATAATTAATAATGGATGGAAGAGGGAATAATTACAATAATAATAATGTTCATGATCATCAACCTCCAAATGCAAGGTTTGAGTTCACTCCAACATGGATCATTGCTGTTGTTTCATCCATTATCGTTATCATTTCCTTCTCTCTTGAGCGTGGCCTTCATTGGCTTGGACAGTTCACTCTGAGTGTAGCTTCTAATACTTAG

Coding sequence (CDS)

ATGGATGGAAGAGGGAATAATTACAATAATAATAATGTTCATGATCATCAACCTCCAAATGCAAGGTTTGAGTTCACTCCAACATGGATCATTGCTGTTGTTTCATCCATTATCGTTATCATTTCCTTCTCTCTTGAGCGTGGCCTTCATTGGCTTGGACAGTTCACTCTGAGTGTAGCTTCTAATACTTAG

Protein sequence

MDGRGNNYNNNNVHDHQPPNARFEFTPTWIIAVVSSIIVIISFSLERGLHWLGQFTLSVASNT
Homology
[Close]
BLAST of MELO3C034561.2 vs. NCBI nr
Match: XP_016902609.1 (PREDICTED: MLO-like protein 13 [Cucumis melo])

HSP 1 Score: 115.5 bits (288), Expect = 6.4e-23
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0 

Query: 1  MDGRGNNYNNNNVHDHQPPNARFEFTPTWIIAVVSSIIVIISFSLERGLHWLGQ 55
          MDGRGNNYNNNNVHDHQPPNARFEFTPTWIIAVVSSIIVIISFSLERGLHWLGQ
Sbjct: 1  MDGRGNNYNNNNVHDHQPPNARFEFTPTWIIAVVSSIIVIISFSLERGLHWLGQ 54

[Close]
BLAST of MELO3C034561.2 vs. NCBI nr
Match: XP_011649433.1 (PREDICTED: MLO-like protein 13 [Cucumis sativus] >KGN62216.1 hypothetical protein Csa_2G336140 [Cucumis sativus])

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-15
Identity = 48/54 (88.89%), Postives = 50/54 (92.59%), Query Frame = 0 

Query: 1  MDGRGNNYNNNNVHDHQPPNARFEFTPTWIIAVVSSIIVIISFSLERGLHWLGQ 55
          MDGRGN  +NNNVHDH PPNA+FEFTPTWIIAVVSSIIVIISFSLERGLH LGQ
Sbjct: 1  MDGRGN--SNNNVHDH-PPNAKFEFTPTWIIAVVSSIIVIISFSLERGLHHLGQ 51

[Close]
BLAST of MELO3C034561.2 vs. NCBI nr
Match: XP_022932020.1 (MLO-like protein 13 isoform X1 [Cucurbita moschata])

HSP 1 Score: 77.0 bits (188), Expect = 2.5e-11
Identity = 35/40 (87.50%), Postives = 39/40 (97.50%), Query Frame = 0 

Query: 16 HQPPNARFEFTPTWIIAVVSSIIVIISFSLERGLHWLGQF 56
          H+PPNA+FEFTPTWI+AVVSSIIVIISFSLERGLH LGQ+
Sbjct: 9  HEPPNAKFEFTPTWIVAVVSSIIVIISFSLERGLHHLGQW 48

[Close]
BLAST of MELO3C034561.2 vs. NCBI nr
Match: XP_023512348.1 (MLO-like protein 13 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 77.0 bits (188), Expect = 2.5e-11
Identity = 35/40 (87.50%), Postives = 39/40 (97.50%), Query Frame = 0 

Query: 16 HQPPNARFEFTPTWIIAVVSSIIVIISFSLERGLHWLGQF 56
          H+PPNA+FEFTPTWI+AVVSSIIVIISFSLERGLH LGQ+
Sbjct: 9  HEPPNAKFEFTPTWIVAVVSSIIVIISFSLERGLHHLGQW 48

[Close]
BLAST of MELO3C034561.2 vs. NCBI nr
Match: XP_022973815.1 (MLO-like protein 13 isoform X1 [Cucurbita maxima])

HSP 1 Score: 76.6 bits (187), Expect = 3.3e-11
Identity = 35/39 (89.74%), Postives = 38/39 (97.44%), Query Frame = 0 

Query: 16 HQPPNARFEFTPTWIIAVVSSIIVIISFSLERGLHWLGQ 55
          H+PPNA+FEFTPTWI+AVVSSIIVIISFSLERGLH LGQ
Sbjct: 9  HEPPNAKFEFTPTWIVAVVSSIIVIISFSLERGLHHLGQ 47

[Close]
BLAST of MELO3C034561.2 vs. TAIR10
Match: AT4G24250.1 (Seven transmembrane MLO family protein)

HSP 1 Score: 42.7 bits (99), Expect = 9.5e-05
Identity = 17/31 (54.84%), Postives = 24/31 (77.42%), Query Frame = 0 

Query: 24 EFTPTWIIAVVSSIIVIISFSLERGLHWLGQ 55
          E+TPTW++A +  IIV++S   ERGLH LG+
Sbjct: 10 EYTPTWVVAFICFIIVLLSLLAERGLHHLGK 40

[Close]
BLAST of MELO3C034561.2 vs. TAIR10
Match: AT2G44110.2 (Seven transmembrane MLO family protein)

HSP 1 Score: 42.4 bits (98), Expect = 1.2e-04
Identity = 17/31 (54.84%), Postives = 26/31 (83.87%), Query Frame = 0 

Query: 24 EFTPTWIIAVVSSIIVIISFSLERGLHWLGQ 55
          E+TPTW++A+V S+IV ISF++ER +H  G+
Sbjct: 9  EYTPTWVVALVCSVIVSISFAVERLIHRAGK 39

[Close]
BLAST of MELO3C034561.2 vs. TAIR10
Match: AT4G02600.1 (Seven transmembrane MLO family protein)

HSP 1 Score: 42.0 bits (97), Expect = 1.6e-04
Identity = 18/38 (47.37%), Postives = 25/38 (65.79%), Query Frame = 0 

Query: 16 HQPPNARFEFTPTWIIAVVSSIIVIISFSLERGLHWLG 54
          H       EFTPTW++A V ++IV IS ++ER LH+ G
Sbjct: 3  HGGEGMSLEFTPTWVVAGVCTVIVAISLAVERLLHYFG 40

[Close]
BLAST of MELO3C034561.2 vs. TrEMBL
Match: tr|A0A1S4E2Z8|A0A1S4E2Z8_CUCME (MLO-like protein 13 OS=Cucumis melo OX=3656 GN=LOC107991784 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.2e-23
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0 

Query: 1  MDGRGNNYNNNNVHDHQPPNARFEFTPTWIIAVVSSIIVIISFSLERGLHWLGQ 55
          MDGRGNNYNNNNVHDHQPPNARFEFTPTWIIAVVSSIIVIISFSLERGLHWLGQ
Sbjct: 1  MDGRGNNYNNNNVHDHQPPNARFEFTPTWIIAVVSSIIVIISFSLERGLHWLGQ 54

[Close]
BLAST of MELO3C034561.2 vs. TrEMBL
Match: tr|A0A0A0LQD7|A0A0A0LQD7_CUCSA (MLO-like protein OS=Cucumis sativus OX=3659 GN=MLO PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 8.5e-16
Identity = 48/54 (88.89%), Postives = 50/54 (92.59%), Query Frame = 0 

Query: 1  MDGRGNNYNNNNVHDHQPPNARFEFTPTWIIAVVSSIIVIISFSLERGLHWLGQ 55
          MDGRGN  +NNNVHDH PPNA+FEFTPTWIIAVVSSIIVIISFSLERGLH LGQ
Sbjct: 1  MDGRGN--SNNNVHDH-PPNAKFEFTPTWIIAVVSSIIVIISFSLERGLHHLGQ 51

[Close]
BLAST of MELO3C034561.2 vs. TrEMBL
Match: tr|A0A0D9WGL0|A0A0D9WGL0_9ORYZ (MLO-like protein OS=Leersia perrieri OX=77586 GN=MLO PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 9.7e-04
Identity = 22/34 (64.71%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 21 ARFEFTPTWIIAVVSSIIVIISFSLERGLHWLGQ 55
          A  EFTPTWI+A V S+IV+IS + ERGLH+LG+
Sbjct: 13 ATLEFTPTWIVAAVCSLIVLISLAAERGLHYLGK 46

[Close]
BLAST of MELO3C034561.2 vs. TrEMBL
Match: tr|A0A0D9WGK9|A0A0D9WGK9_9ORYZ (MLO-like protein OS=Leersia perrieri OX=77586 GN=MLO PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 9.7e-04
Identity = 22/34 (64.71%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 21 ARFEFTPTWIIAVVSSIIVIISFSLERGLHWLGQ 55
          A  EFTPTWI+A V S+IV+IS + ERGLH+LG+
Sbjct: 13 ATLEFTPTWIVAAVCSLIVLISLAAERGLHYLGK 46

[Close]
BLAST of MELO3C034561.2 vs. TrEMBL
Match: tr|A0A1Z5R3B1|A0A1Z5R3B1_SORBI (MLO-like protein OS=Sorghum bicolor OX=4558 GN=MLO PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 9.7e-04
Identity = 22/41 (53.66%), Postives = 29/41 (70.73%), Query Frame = 0 

Query: 14 HDHQPPNARFEFTPTWIIAVVSSIIVIISFSLERGLHWLGQ 55
          HD +      EFTPTWI+A V S+IV++S   ERGLH+LG+
Sbjct: 3  HDEETEATALEFTPTWIVAGVCSLIVLLSLLAERGLHYLGK 43

The following BLAST results are available for this feature:
BLAST of MELO3C034561.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016902609.16.4e-23100.00PREDICTED: MLO-like protein 13 [Cucumis melo][more]
XP_011649433.11.3e-1588.89PREDICTED: MLO-like protein 13 [Cucumis sativus] >KGN62216.1 hypothetical protei... [more]
XP_022932020.12.5e-1187.50MLO-like protein 13 isoform X1 [Cucurbita moschata][more]
XP_023512348.12.5e-1187.50MLO-like protein 13 [Cucurbita pepo subsp. pepo][more]
XP_022973815.13.3e-1189.74MLO-like protein 13 isoform X1 [Cucurbita maxima][more]
BLAST of MELO3C034561.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G24250.19.5e-0554.84Seven transmembrane MLO family protein[more]
AT2G44110.21.2e-0454.84Seven transmembrane MLO family protein[more]
AT4G02600.11.6e-0447.37Seven transmembrane MLO family protein[more]
BLAST of MELO3C034561.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C034561.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E2Z8|A0A1S4E2Z8_CUCME4.2e-23100.00MLO-like protein 13 OS=Cucumis melo OX=3656 GN=LOC107991784 PE=4 SV=1[more]
tr|A0A0A0LQD7|A0A0A0LQD7_CUCSA8.5e-1688.89MLO-like protein OS=Cucumis sativus OX=3659 GN=MLO PE=3 SV=1[more]
tr|A0A0D9WGL0|A0A0D9WGL0_9ORYZ9.7e-0464.71MLO-like protein OS=Leersia perrieri OX=77586 GN=MLO PE=3 SV=1[more]
tr|A0A0D9WGK9|A0A0D9WGK9_9ORYZ9.7e-0464.71MLO-like protein OS=Leersia perrieri OX=77586 GN=MLO PE=3 SV=1[more]
tr|A0A1Z5R3B1|A0A1Z5R3B1_SORBI9.7e-0453.66MLO-like protein OS=Sorghum bicolor OX=4558 GN=MLO PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006952defense response
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR004326Mlo
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034561.2.1MELO3C034561.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004326Mlo-related proteinPFAMPF03094Mlocoord: 23..55
e-value: 1.4E-6
score: 26.9

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C034561.2Watermelon (97103) v2medwmbB088
MELO3C034561.2Wax gourdmedwgoB134
MELO3C034561.2Cucumber (Gy14) v2cgybmedB081
MELO3C034561.2Cucumber (Gy14) v1cgymedB384
MELO3C034561.2Cucurbita maxima (Rimu)cmamedB572
MELO3C034561.2Cucurbita maxima (Rimu)cmamedB629
MELO3C034561.2Cucurbita moschata (Rifu)cmomedB562
MELO3C034561.2Cucurbita moschata (Rifu)cmomedB618
MELO3C034561.2Cucurbita pepo (Zucchini)cpemedB305
MELO3C034561.2Cucurbita pepo (Zucchini)cpemedB312
MELO3C034561.2Cucurbita pepo (Zucchini)cpemedB787
MELO3C034561.2Wild cucumber (PI 183967)cpimedB093
MELO3C034561.2Cucumber (Chinese Long) v2cumedB093
MELO3C034561.2Bottle gourd (USVL1VR-Ls)lsimedB058
MELO3C034561.2Watermelon (Charleston Gray)medwcgB089
MELO3C034561.2Watermelon (97103) v1medwmB118
MELO3C034561.2Watermelon (97103) v1medwmB128
MELO3C034561.2Silver-seed gourdcarmedB0726
MELO3C034561.2Silver-seed gourdcarmedB1039
MELO3C034561.2Cucumber (Chinese Long) v3cucmedB097