MELO3C034510.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C034510.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptioncentromere/kinetochore protein zw10 homolog
Locationchr10 : 23511150 .. 23512945 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGTCACCGCTCTGTGCTGTACGCCACACCACTAGACGCCGCACCGTTGGACGCCGCACTGCTGGACACCGCACCGCTGGATGTCGCCTTCTACTTCGCACCCGACCCACTTTTCTTCTACCGCATCTGTCACAGCCACCATTGGTTTGAAAACCGAACTCGAGGGAGAAACTAAGGCGAGCCTCAACCTTTTCTAGGGTTCACTGCCACTCAGCTCCACCATGCATAGAATCGCCGATTCACGACTCAAGTCGCTCAAGGTCAGTCTAATCCTTCTTTTTGTGTTTAATTAATCTCTTTTCTGAATCGAAGAAAGGTGTTTCCATTATAGATCTGGTCTTTGTTTTGTTTATGTTGGTTGCTCTTTAATGTGCTCTAAACATGGTTTCTTTGTGACGATTTAAAGCTTGACCATCCTTTTTGATTCTGTATTGTTTACCTAGTTATCAGATGCTTGGGATAAAAAATGCTTATGTTGCTTCTACTTGGTTGTTTTGAGAGATAGGCATTCATTTTTATGTCTTTGAGAAATGATTATGTGATTGACTCGTATTGTCAATGTAGTTGTACTTTGCATCTGGGAAGAGGAAAGAAATTTTAGCAAAGGCCAGAAATTTGCTTCTTAAATGCGATTTCTTTGTCCCTAAAGTAAGTTCTTAGGACATGATAATATTCCTTTATAATTATTATATTACCGTTGTTTTGTGTAATGAATATGAATACAGGAGCTCACAATCAAAGGTGATAAGCAAAACTGGAATGAAATGGTTAAAGTAAAGCCCTTCAAATCAAGTTGTTGACTTACTTTTCCCTTGGATTGCAAGTCTCCTTCTGCTTATTTTAAGCCTGAACAATCTTCAAGAAGCGTCATTTCGCAGAAATGGGCAGTTTTTCTTTTCCTCGGCAGCTTCTGTTTGGAGATGTTCTTCACAAACAGGTTCGTATCAGTAAGAAAAATTTGATTTGGGGTTGTTTGTGTTCAATTAGCTTTGATCGATGGGTTGAAATGGTTTCTCTTGGATTCCTAGGTTTTAGGTTCCAATTTGGGTGTTCTCTTTTTGGGTTTTGTATTTATTTGGGGAAACATTGCCCATTTTTCATTTATTAAATGCAGCCGACAGTATTAATGTTCTTGGTTTTGTGTATTTTTGTTTGTTGATTAAAGTTGTATATTTTGAAAAATTGATCACCAGCAGTTATAGCCCTATTAATACGATTTTTTTTTTCTATTTCGTTCCACCATCTAGTTGTTTTCGTTTTCCTCCTCATTCTGATTGGGTGAAGAACTGTTTCTTTTCACCATTTCCTCATTGAATAAAGATTTAGACAAAACCTTGGGTTGTTTATGGATTTATGGATTTGATTTCGTTGTTATCATGAGTATTCTTATAACATCCACCGTCAATTATGGGAAAAAGGACGTCTGTTTCGAGAAGCTTAAGAATCAGCTCTGTCGGGAAGATCGTTCCAATGTTTTTTTTTCCTTAAAAAGAAGAGATAAACTGAAGATCATATTCAAATTGCTTGTAGGATGTGGAATGTTCCAGAACCTAAAGGAATCACTCGAACAACGCCATTTGAAGCCGAAAAGTTAAAGTTAGTTTCGTAAGGCTGTGGTCCGAAATCGATAAGCATCTTCAAAGCTGTTTTCGTTACTTGTCGAAAAGGATACATGTTCAAGAAAGTAATTACATTGCTACTTTTATATTTTCTAGTTGGATGAGAAGGAAGCAAAGCGCGTGTCGAAAGATATTTTCGGGGAAGTCTCTAAGACTCACAATGCTATACAGTGA

mRNA sequence

ATGACGTCACCGCTCTGTGCTGTACGCCACACCACTAGACGCCGCACCGTTGGACGCCGCACTGCTGGACACCGCACCGCTGGATGTCGCCTTCTACTTCGCACCCGACCCACTTTTCTTCTACCGCATCTGTCACAGCCACCATTGGGTTCACTGCCACTCAGCTCCACCATGCATAGAATCGCCGATTCACGACTCAAGTCGCTCAAGTTGTACTTTGCATCTGGGAAGAGGAAAGAAATTTTAGCAAAGGCCAGAAATTTGCTTCTTAAATGCGATTTCTTTGTCCCTAAAGAGCTCACAATCAAAGGTGATAAGCAAAACTGGAATGAAATGGTTAAATTGGATGAGAAGGAAGCAAAGCGCGTGTCGAAAGATATTTTCGGGGAAGTCTCTAAGACTCACAATGCTATACAGTGA

Coding sequence (CDS)

ATGACGTCACCGCTCTGTGCTGTACGCCACACCACTAGACGCCGCACCGTTGGACGCCGCACTGCTGGACACCGCACCGCTGGATGTCGCCTTCTACTTCGCACCCGACCCACTTTTCTTCTACCGCATCTGTCACAGCCACCATTGGGTTCACTGCCACTCAGCTCCACCATGCATAGAATCGCCGATTCACGACTCAAGTCGCTCAAGTTGTACTTTGCATCTGGGAAGAGGAAAGAAATTTTAGCAAAGGCCAGAAATTTGCTTCTTAAATGCGATTTCTTTGTCCCTAAAGAGCTCACAATCAAAGGTGATAAGCAAAACTGGAATGAAATGGTTAAATTGGATGAGAAGGAAGCAAAGCGCGTGTCGAAAGATATTTTCGGGGAAGTCTCTAAGACTCACAATGCTATACAGTGA

Protein sequence

MTSPLCAVRHTTRRRTVGRRTAGHRTAGCRLLLRTRPTFLLPHLSQPPLGSLPLSSTMHRIADSRLKSLKLYFASGKRKEILAKARNLLLKCDFFVPKELTIKGDKQNWNEMVKLDEKEAKRVSKDIFGEVSKTHNAIQ
Homology
[Close]
BLAST of MELO3C034510.2 vs. NCBI nr
Match: XP_008456395.1 (PREDICTED: centromere/kinetochore protein zw10 homolog [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 3.1e-14
Identity = 41/48 (85.42%), Postives = 47/48 (97.92%), Query Frame = 0 

Query: 67  KSLKLYFASGKRKEILAKARNLLLKCDFFVPKELTIKGDKQNWNEMVK 115
           ++++++FASGKRKEILAKARNLLLKCDF VPKELTIKGDKQNWNEMVK
Sbjct: 390 ENVEVHFASGKRKEILAKARNLLLKCDFSVPKELTIKGDKQNWNEMVK 437

[Close]
BLAST of MELO3C034510.2 vs. NCBI nr
Match: XP_004143232.2 (PREDICTED: centromere/kinetochore protein zw10 homolog isoform X1 [Cucumis sativus] >KGN47009.1 hypothetical protein Csa_6G168260 [Cucumis sativus])

HSP 1 Score: 84.0 bits (206), Expect = 4.5e-13
Identity = 39/48 (81.25%), Postives = 45/48 (93.75%), Query Frame = 0 

Query: 67  KSLKLYFASGKRKEILAKARNLLLKCDFFVPKELTIKGDKQNWNEMVK 115
           ++++++FASGKRKEILAKARNLLLKCDF VPKELTIKGDKQ WNEM K
Sbjct: 390 ENVEVHFASGKRKEILAKARNLLLKCDFSVPKELTIKGDKQKWNEMAK 437

[Close]
BLAST of MELO3C034510.2 vs. NCBI nr
Match: XP_011657096.1 (PREDICTED: centromere/kinetochore protein zw10 homolog isoform X2 [Cucumis sativus])

HSP 1 Score: 84.0 bits (206), Expect = 4.5e-13
Identity = 39/48 (81.25%), Postives = 45/48 (93.75%), Query Frame = 0 

Query: 67  KSLKLYFASGKRKEILAKARNLLLKCDFFVPKELTIKGDKQNWNEMVK 115
           ++++++FASGKRKEILAKARNLLLKCDF VPKELTIKGDKQ WNEM K
Sbjct: 201 ENVEVHFASGKRKEILAKARNLLLKCDFSVPKELTIKGDKQKWNEMAK 248

[Close]
BLAST of MELO3C034510.2 vs. NCBI nr
Match: XP_022149708.1 (centromere/kinetochore protein zw10 homolog [Momordica charantia])

HSP 1 Score: 72.4 bits (176), Expect = 1.4e-09
Identity = 34/53 (64.15%), Postives = 44/53 (83.02%), Query Frame = 0 

Query: 67  KSLKLYFASGKRKEILAKARNLLLKCDFFVPKELTIKGDKQNWNEMVKLDEKE 120
           ++++++FASGKRKEILAKARNLLLKCDF VP+E TIKG KQ  NE+ K+   +
Sbjct: 390 ENVEVHFASGKRKEILAKARNLLLKCDFSVPEEFTIKGGKQKGNEVAKISSNQ 442

[Close]
BLAST of MELO3C034510.2 vs. NCBI nr
Match: XP_022944496.1 (centromere/kinetochore protein zw10 homolog [Cucurbita moschata])

HSP 1 Score: 70.1 bits (170), Expect = 6.8e-09
Identity = 33/48 (68.75%), Postives = 42/48 (87.50%), Query Frame = 0 

Query: 67  KSLKLYFASGKRKEILAKARNLLLKCDFFVPKELTIKGDKQNWNEMVK 115
           ++++++FASGKRKEILAKARNLLLKCDF VP+E TIKG K+  NE+ K
Sbjct: 388 ENVEVHFASGKRKEILAKARNLLLKCDFSVPEEFTIKGGKKKGNEVTK 435

[Close]
BLAST of MELO3C034510.2 vs. TAIR10
Match: AT2G32900.1 (centromere/kinetochore protein, putative (ZW10))

HSP 1 Score: 46.6 bits (109), Expect = 1.5e-05
Identity = 23/49 (46.94%), Postives = 38/49 (77.55%), Query Frame = 0 

Query: 62  ADSRL----KSLKLYFASGKRKEILAKARNLLLKCDFFVPKELTIKGDK 107
           A+SRL    + ++++FAS K+ EILAKARNLLL+C+F +P+++ ++  K
Sbjct: 381 AESRLSKYAEDVEVHFASRKKIEILAKARNLLLQCNFTIPQDIAMRNAK 429

[Close]
BLAST of MELO3C034510.2 vs. Swiss-Prot
Match: sp|O48626|ZW10_ARATH (Centromere/kinetochore protein zw10 homolog OS=Arabidopsis thaliana OX=3702 GN=ZW10 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.6e-04
Identity = 23/49 (46.94%), Postives = 38/49 (77.55%), Query Frame = 0 

Query: 62  ADSRL----KSLKLYFASGKRKEILAKARNLLLKCDFFVPKELTIKGDK 107
           A+SRL    + ++++FAS K+ EILAKARNLLL+C+F +P+++ ++  K
Sbjct: 381 AESRLSKYAEDVEVHFASRKKIEILAKARNLLLQCNFTIPQDIAMRNAK 429

[Close]
BLAST of MELO3C034510.2 vs. TrEMBL
Match: tr|A0A1S3C346|A0A1S3C346_CUCME (centromere/kinetochore protein zw10 homolog OS=Cucumis melo OX=3656 GN=LOC103496345 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.1e-14
Identity = 41/48 (85.42%), Postives = 47/48 (97.92%), Query Frame = 0 

Query: 67  KSLKLYFASGKRKEILAKARNLLLKCDFFVPKELTIKGDKQNWNEMVK 115
           ++++++FASGKRKEILAKARNLLLKCDF VPKELTIKGDKQNWNEMVK
Sbjct: 390 ENVEVHFASGKRKEILAKARNLLLKCDFSVPKELTIKGDKQNWNEMVK 437

[Close]
BLAST of MELO3C034510.2 vs. TrEMBL
Match: tr|A0A0A0KDY0|A0A0A0KDY0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G168260 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.0e-13
Identity = 39/48 (81.25%), Postives = 45/48 (93.75%), Query Frame = 0 

Query: 67  KSLKLYFASGKRKEILAKARNLLLKCDFFVPKELTIKGDKQNWNEMVK 115
           ++++++FASGKRKEILAKARNLLLKCDF VPKELTIKGDKQ WNEM K
Sbjct: 390 ENVEVHFASGKRKEILAKARNLLLKCDFSVPKELTIKGDKQKWNEMAK 437

The following BLAST results are available for this feature:
BLAST of MELO3C034510.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008456395.13.1e-1485.42PREDICTED: centromere/kinetochore protein zw10 homolog [Cucumis melo][more]
XP_004143232.24.5e-1381.25PREDICTED: centromere/kinetochore protein zw10 homolog isoform X1 [Cucumis sativ... [more]
XP_011657096.14.5e-1381.25PREDICTED: centromere/kinetochore protein zw10 homolog isoform X2 [Cucumis sativ... [more]
XP_022149708.11.4e-0964.15centromere/kinetochore protein zw10 homolog [Momordica charantia][more]
XP_022944496.16.8e-0968.75centromere/kinetochore protein zw10 homolog [Cucurbita moschata][more]
BLAST of MELO3C034510.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G32900.11.5e-0546.94centromere/kinetochore protein, putative (ZW10)[more]
BLAST of MELO3C034510.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O48626|ZW10_ARATH2.6e-0446.94Centromere/kinetochore protein zw10 homolog OS=Arabidopsis thaliana OX=3702 GN=Z... [more]
BLAST of MELO3C034510.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C346|A0A1S3C346_CUCME2.1e-1485.42centromere/kinetochore protein zw10 homolog OS=Cucumis melo OX=3656 GN=LOC103496... [more]
tr|A0A0A0KDY0|A0A0A0KDY0_CUCSA3.0e-1381.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G168260 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0000775 chromosome, centromeric region
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034510.2.1MELO3C034510.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C034510.2Wax gourdmedwgoB088
MELO3C034510.2Bottle gourd (USVL1VR-Ls)lsimedB087