MELO3C034441.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C034441.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Ulp1 protease family, carboxy-terminal domain protein
Location	chr10 : 18153501 .. 18157605 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAATTTCCATCTTCTTTGAAGTGGTCGCGATTTTTTTAATTTGGGGTTTAAGCTGCATGTTTTTTGATTTTCATTTAGACTTGAGCATAGACTTGAGTATAAAGTGATTTGAGCATAGACTTCATCTGTTTCCTTTTCAGCCTGAAAAATTGAAAGCAAAAGAAGAAAATGAACATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGATGTTGTTTATTGTAGTTTTCATTGGATGTTGCATGTTATCGATCTTCTTAAAATTGTGTTTATGTTTTGGACTCTCTTCGAAGTAAAGTCAATGAAGACATTCATGGAATCATAAATGTGTAAGTGTATTCACTTTATTACTTCTTATTTAACTTTATTGTCTTCTAATGTTTCAAAATATTTAGAGGGTTGAAGACATGGCAAGCGAAACACGATCTACAACGCGATCGATCAACTCCAAAATGGAGACCTGTAAAGGTAATTTGCATTTACACATAATTATTTTTTATGAAACATAAGATTAATTTGTATTCAATTTATATACATGTAGTGCCCTCGTCAATTGGATTCTGTAGGGTGTGGGTACTACGTGCAAAAGTACATACATGAGATAGTACATAATTCTAGTACTTCTATTACTAGCCTTGTAAGTTTCTACTTTAACTTTTTACATATTACAAAATACATAGAAAATAAACTTAATATTCAAAATAGAAAACGAAAAACAAAATAGTTAACAAATATCAATTATTTCGAGACTATTTAGTTTTTGTCCTTCTAGCTTCCATTTTAATTTCAAGTGAAACTCTCGTTTTAATAAAGCTATTTACATTGTATTTCAAGTGCCTTCAAATGAGTAAATAAAAAAAATAAATAACAACTATTGTCTTAATTATTAATTATTCCTTATAATTAAAATGGACATAAATTATGGTTTGATTTTTTTTTTTTACTTTCTATATTACTATTTAATATTTAAATTTTTTGTATTGATATTATTTTTATTATCATTTAGAAATTATAA

mRNA sequence

ATGGTAATTTCCATCTTCTTTGAAGTGGTCGCGATTTTTTTAATTTGGGGTTTAAGCTGCATGTTTTTTGATTTTCATTTAGACTTGAGCATAGACTTGAGTATAAAAGGGTTGAAGACATGGCAAGCGAAACACGATCTACAACGCGATCGATCAACTCCAAAATGGAGACCTGTAAAGTGCCCTCGTCAATTGGATTCTGTAGGGTGTGGGTACtACGTGCAAAAGTACATACATGAGATAGTACATAATTCTAGTACTTCTATTACTAGCCTTAAATTATAA

Coding sequence (CDS)

ATGGTAATTTCCATCTTCTTTGAAGTGGTCGCGATTTTTTTAATTTGGGGTTTAAGCTGCATGTTTTTTGATTTTCATTTAGACTTGAGCATAGACTTGAGTATAAAAGGGTTGAAGACATGGCAAGCGAAACACGATCTACAACGCGATCGATCAACTCCAAAATGGAGACCTGTAAAGTGCCCTCGTCAATTGGATTCTGTAGGGTGTGGGTACTACGTGCAAAAGTACATACATGAGATAGTACATAATTCTAGTACTTCTATTACTAGCCTTAAATTATAA

Protein sequence

MVISIFFEVVAIFLIWGLSCMFFDFHLDLSIDLSIKGLKTWQAKHDLQRDRSTPKWRPVKCPRQLDSVGCGYYVQKYIHEIVHNSSTSITSLKL

Homology

[Close]

BLAST of MELO3C034441.2 vs. NCBI nr
Match: XP_022157245.1 (uncharacterized protein LOC111024004 [Momordica charantia])

HSP 1 Score: 79.7 bits (195), Expect = 5.8e-12
Identity = 35/55 (63.64%), Postives = 39/55 (70.91%), Query Frame = 0


Query: 38  LKTWQAKHDLQRDRSTPKWRPVKCPRQLDSVGCGYYVQKYIHEIVHNSSTSITSL 93
           LK WQAKH  Q+ RST  W+PVKCPRQL S+ CGYY+Q YI EIV N    IT L
Sbjct: 49  LKMWQAKHSTQQSRSTTIWKPVKCPRQLGSIECGYYLQMYIREIVRNPHAPITEL 103

[Close]

BLAST of MELO3C034441.2 vs. NCBI nr
Match: XP_022136079.1 (uncharacterized protein LOC111007859 isoform X3 [Momordica charantia])

HSP 1 Score: 77.4 bits (189), Expect = 2.9e-11
Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 0


Query: 38  LKTWQAKHDLQRDRSTPKWRPVKCPRQLDSVGCGYYVQKYIHEIVHNSSTSITSL 93
           LK WQAKH +QR R+   W+ +KCP Q+ SV CGYYVQKYI EIV N+ST I+++
Sbjct: 562 LKIWQAKHSIQRYRTNTIWKSIKCPCQMGSVECGYYVQKYIREIVQNASTHISNI 616

[Close]

BLAST of MELO3C034441.2 vs. NCBI nr
Match: XP_022136077.1 (uncharacterized protein LOC111007859 isoform X2 [Momordica charantia])

HSP 1 Score: 77.4 bits (189), Expect = 2.9e-11
Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 0


Query: 38  LKTWQAKHDLQRDRSTPKWRPVKCPRQLDSVGCGYYVQKYIHEIVHNSSTSITSL 93
           LK WQAKH +QR R+   W+ +KCP Q+ SV CGYYVQKYI EIV N+ST I+++
Sbjct: 584 LKIWQAKHSIQRYRTNTIWKSIKCPCQMGSVECGYYVQKYIREIVQNASTHISNI 638

[Close]

BLAST of MELO3C034441.2 vs. NCBI nr
Match: XP_022136076.1 (uncharacterized protein LOC111007859 isoform X1 [Momordica charantia])

HSP 1 Score: 77.4 bits (189), Expect = 2.9e-11
Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 0


Query: 38  LKTWQAKHDLQRDRSTPKWRPVKCPRQLDSVGCGYYVQKYIHEIVHNSSTSITSL 93
           LK WQAKH +QR R+   W+ +KCP Q+ SV CGYYVQKYI EIV N+ST I+++
Sbjct: 585 LKIWQAKHSIQRYRTNTIWKSIKCPCQMGSVECGYYVQKYIREIVQNASTHISNI 639

[Close]

BLAST of MELO3C034441.2 vs. NCBI nr
Match: XP_022136080.1 (uncharacterized protein LOC111007859 isoform X4 [Momordica charantia])

HSP 1 Score: 75.9 bits (185), Expect = 8.3e-11
Identity = 33/52 (63.46%), Postives = 39/52 (75.00%), Query Frame = 0


Query: 38  LKTWQAKHDLQRDRSTPKWRPVKCPRQLDSVGCGYYVQKYIHEIVHNSSTSI 90
           LK WQAKH +QR R+   W+ +KCP Q+ SV CGYYVQKYI EIV N+ST I
Sbjct: 585 LKIWQAKHSIQRYRTNTIWKSIKCPCQMGSVECGYYVQKYIREIVQNASTHI 636

[Close]

BLAST of MELO3C034441.2 vs. TrEMBL
Match: tr|A0A1S3BRX5|A0A1S3BRX5_CUCME (uncharacterized protein LOC103493028 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493028 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.6e-10
Identity = 30/57 (52.63%), Postives = 41/57 (71.93%), Query Frame = 0


Query: 36  KGLKTWQAKHDLQRDRSTPKWRPVKCPRQLDSVGCGYYVQKYIHEIVHNSSTSITSL 93
           K LK WQ +H  +  RS  +W+P+KCPR L S+ CGYYVQKY+ E+V N++T I +L
Sbjct: 630 KSLKHWQFEHSPKHYRSRIRWKPIKCPRPLGSIECGYYVQKYLRELVKNANTRINNL 686

[Close]

BLAST of MELO3C034441.2 vs. TrEMBL
Match: tr|A0A2P6QQA8|A0A2P6QQA8_ROSCH (Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0390571 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.8e-04
Identity = 27/62 (43.55%), Postives = 36/62 (58.06%), Query Frame = 0


Query: 31  IDLSIKGLKTWQAKHDLQRDRSTPKWRPVKCPRQLDSVGCGYYVQKYIHEIVHNSSTSIT 90
           I+LSIK     + +    + R    W  VKCPRQ  SV CGYYV KY+ EI+   S+SI 
Sbjct: 507 IELSIKMFNAQKGR----KSRKPVHWEVVKCPRQPGSVECGYYVMKYMKEIIGTPSSSIL 564

Query: 91  SL 93
           ++
Sbjct: 567 NM 564

[Close]

BLAST of MELO3C034441.2 vs. TrEMBL
Match: tr|A0A2P6PI11|A0A2P6PI11_ROSCH (Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0240601 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 8.5e-04
Identity = 25/62 (40.32%), Postives = 37/62 (59.68%), Query Frame = 0


Query: 31  IDLSIKGLKTWQAKHDLQRDRSTPKWRPVKCPRQLDSVGCGYYVQKYIHEIVHNSSTSIT 90
           ++L+IK     + +    ++R    W  VKCPRQ  SV CGYYV KY+ EI+   S+SI 
Sbjct: 507 VELAIKMFNAQKGR----KNRKKVHWEVVKCPRQPGSVECGYYVMKYMKEIIGTPSSSIL 564

Query: 91  SL 93
           ++
Sbjct: 567 NM 564

[Close]

BLAST of MELO3C034441.2 vs. TrEMBL
Match: tr|A0A2P6RE63|A0A2P6RE63_ROSCH (Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0482291 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 8.5e-04
Identity = 25/62 (40.32%), Postives = 37/62 (59.68%), Query Frame = 0


Query: 31  IDLSIKGLKTWQAKHDLQRDRSTPKWRPVKCPRQLDSVGCGYYVQKYIHEIVHNSSTSIT 90
           ++L+IK     + +    ++R    W  VKCPRQ  SV CGYYV KY+ EI+   S+SI 
Sbjct: 396 VELAIKMFNAQKGR----KNRKKVHWEVVKCPRQPGSVECGYYVMKYMKEIIGTPSSSIL 453

Query: 91  SL 93
           ++
Sbjct: 456 NM 453

The following BLAST results are available for this feature:

BLAST of MELO3C034441.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157245.1	5.8e-12	63.64	uncharacterized protein LOC111024004 [Momordica charantia]	[more]
XP_022136079.1	2.9e-11	60.00	uncharacterized protein LOC111007859 isoform X3 [Momordica charantia]	[more]
XP_022136077.1	2.9e-11	60.00	uncharacterized protein LOC111007859 isoform X2 [Momordica charantia]	[more]
XP_022136076.1	2.9e-11	60.00	uncharacterized protein LOC111007859 isoform X1 [Momordica charantia]	[more]
XP_022136080.1	8.3e-11	63.46	uncharacterized protein LOC111007859 isoform X4 [Momordica charantia]	[more]

BLAST of MELO3C034441.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C034441.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C034441.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BRX5\|A0A1S3BRX5_CUCME	3.6e-10	52.63	uncharacterized protein LOC103493028 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2P6QQA8\|A0A2P6QQA8_ROSCH	3.8e-04	43.55	Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinen...	[more]
tr\|A0A2P6PI11\|A0A2P6PI11_ROSCH	8.5e-04	40.32	Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinen...	[more]
tr\|A0A2P6RE63\|A0A2P6RE63_ROSCH	8.5e-04	40.32	Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinen...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR038765	Papain_like_cys_pep_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0008233	peptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034441.2.1	MELO3C034441.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	SSF54001	Cysteine proteinases	coord: 40..90

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C034441.2	Cucumber (Chinese Long) v3	cucmedB377
MELO3C034441.2	Watermelon (97103) v2	medwmbB064
MELO3C034441.2	Wax gourd	medwgoB073
MELO3C034441.2	Cucumber (Gy14) v2	cgybmedB320
MELO3C034441.2	Cucurbita maxima (Rimu)	cmamedB728
MELO3C034441.2	Cucurbita maxima (Rimu)	cmamedB731
MELO3C034441.2	Cucurbita moschata (Rifu)	cmomedB722
MELO3C034441.2	Cucurbita moschata (Rifu)	cmomedB725
MELO3C034441.2	Cucurbita pepo (Zucchini)	cpemedB425
MELO3C034441.2	Cucurbita pepo (Zucchini)	cpemedB426
MELO3C034441.2	Wild cucumber (PI 183967)	cpimedB364
MELO3C034441.2	Cucumber (Chinese Long) v2	cumedB361
MELO3C034441.2	Bottle gourd (USVL1VR-Ls)	lsimedB299
MELO3C034441.2	Watermelon (Charleston Gray)	medwcgB067
MELO3C034441.2	Watermelon (97103) v1	medwmB058
MELO3C034441.2	Silver-seed gourd	carmedB0092
MELO3C034441.2	Silver-seed gourd	carmedB0668