MELO3C034398.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C034398.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr10 : 15626695 .. 15629735 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTCTCTGCCCTTTCGAAATTGTAAGTTACACTAGATCCCTCACTTGTGCCGTGTTCACCATCCATCAGTCCGCGTTCACCGCCGTGTTCCACCTCTCAAAAAATGCGTACCAAATCCTTCCCATTTCATTCGTTCGTCCGACTCTCTCCCTGCCACCGCCCTCTCCGATTCTCTCTCTGCCTCCGTCTTCGACTCTTTCCCTGTTGCCATGTCTCCATCTCTCTCGCCTTCCTCTCAATCTACATTTTGTTACATTCTTGTTCTTCTCCTTAGGGCTTTCATTTCTCCATGTTTCAATCGATTAGTTTGTAATTTTCCTTCAATTTTTTTGTTCTTAATATGATTTCCACCTCAATTTTTCTAGGGCTTTTAATTGTAGCTTGTGATGTGTCACATTCCAACCTAAAGGGTTCTTCTTCCTCGTTTGTTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTCTTCTTCCTCGTTTGTTCAAAGAATTCAACTTGTTCTTCTTACTTCTTAGTTATCTACTGGTGTAAGTATTTTTTGCTTCTTTTTTTATTGAATCTTTGAGTTTCTACATTTTGGGAATTGAAAATTTTCTTTGTTCTGTTTCTTTCTTTATTGAAATCTTTTTTAATTTTCTTTTTCTTTCTTTGACATTATTTCTTATGTAAATGTAATCTTACTTTTTGTTTATTTGTTAATTTCATTTGTAAATGTCTTATACTCTTCTTGCCTTCTCCTCTTTGGTTTTTAAATGCCTTACCTTGGCTACTCTCATTTGGTTTTTGTTCTAGTTTTGTTCTCCATCCCTGTTTGTTTCCATGTGTGTTGTCTGTCGCACCTCTTTAATTTGTGATAATTGGAACTTTTTTTGTTCTTGCTTCTTTGTTGGCTGGATGCTTAGAGTCAAAGACTTGGTTGTGAGGATTATTTGAAAACGTGTTCGGATAATGACATTTATGTCTTGGCCTGGCGAGATTTGAAATTCACATTTTTCTATCCTCATGTATTTCAATTTGGGCAAGCTTAGTATTCTATGTGAAAATGTCTCCATTTCACATTATCCAACTGTATACAATATCTCCAACGATGGAAACTTAATCGTACATTTTCCATTGTGAAGGCAAGCTAGTCTTGGTAAGGCATATATTTCGATTTCTTCCATGTTTTTGAAAACAATTTCACCATTTCTTCTTCTCCTTCTTCGGGTGTAACTGTAAATCTCATTTCTCTTAAGCTTGATATTTTGCACCATATATAAAGTTGTTCTCAATTCTCAATGTTCAATCACTAAAGTTAACCAAATTGCACAGGTGTTTGTTTAGTATCCAACATTTCACTTGGCATTTGATGAAGGTTTCACGTTTTCTTGTTAATGATACATGCCCTTTTTCTAATTCAGCTTCGGATTATTATACACACCATCAAAATATTTAGTTTAAAAACATTTGATTACTCATCAGTTTTAGTGTGGTTGCATGTTTGAAGTTCATAAAAGTAATGGTAATTTTGGCAGATCATAACTGAGGAGATGGACCTAATAGCTGAGACATACATTGCTGCTCATTATTGTGGTACAAGTCAGCCCAGTTAGAAACTCTATGCCTAATTATAGAAGTTCAAGAGGGAAAGTCGTCTATCTCAGTGATGCAAATATGCACTCAGGGTATTTGTTTACCTTTTCTAATACTCAGGGTATTTGTTTACCTTTTCTGATATTAGACATTTTGATGTGTTAAGATATTTTTAGGAACTAGTCTAGATTTGATAATTATGACATGATAGGCATTATCTTTATAGCCTCCTTTTGTATTCTTTTATTTATTTTCTATGAATCTTTGGTTTGTATGCATAAATTACAATTATGGATTATTTGATTTCTTTTGGTCCTTCTAACCTTTTGAATGCAAGTTAAATGTTGCGTGAAATGTTGCTGTAAAATGTGCTACAATCACCCCAGGTTTGTCATTTGTATCCATTTTATTCTCATATTGTACAATCACCAAATGATGGACATAATTATCAGCTTTAACAATTTAATTGATATCTCTTAATCTCTCTCATTTTTCAGATGAGGCCAGGGTCAAACAGTTTGGACTTAAAACTTGGAGAAGTCCCAATGGCACAATTAAGGAATAGACGCATTCTCATTTATTGATTTCGACAACTGTTTTTTCATCCCCAAACCTTTTATTTTCTATCATTACTTTTTATTTCTATTCAGTTCCAGAAAATGGGGAGACATGAAGAGAGCTTGAGGTTTAAGACTTCAAAGGATCAGGCATAG

mRNA sequence

ATGTGTCTCTGCCCTTTCGAAATTATCCCTCACTTGTGCCGTGTTCACCATCCATCAGTCCGCGTTCACCGCCGTGTTCCACCTCTCAAAAAATGCGTACCAAATCCTTCCCATTTCATTCGTTCGTCCGACTCTCTCCCTGCCAcCGCCCTCTCCGATTCTCTCTCTGCCTCCGTCTTCGACTCTTTCCCTGTTGCCATGTCTCCATCTCTCTCGCCTTCCTCTCAATCTACATTTTGTTACATTCTTGTTCTTCTCCTTAGGGCTTTCATTTCTCCATGTTTCAATCGATTAATCATAACTGAGGAGATGGACCTAATAGCTGAGACATACATTGCTGCTCATTATTGTGGTACAAGTCAGCCCAATGAGGCCAGGTTCCAGAAAATGGGGAGACATGAAGAGAGCTTGAGGTTTAAGACTTCAAAGGATCAGGCATAG

Coding sequence (CDS)

ATGTGTCTCTGCCCTTTCGAAATTATCCCTCACTTGTGCCGTGTTCACCATCCATCAGTCCGCGTTCACCGCCGTGTTCCACCTCTCAAAAAATGCGTACCAAATCCTTCCCATTTCATTCGTTCGTCCGACTCTCTCCCTGCCACCGCCCTCTCCGATTCTCTCTCTGCCTCCGTCTTCGACTCTTTCCCTGTTGCCATGTCTCCATCTCTCTCGCCTTCCTCTCAATCTACATTTTGTTACATTCTTGTTCTTCTCCTTAGGGCTTTCATTTCTCCATGTTTCAATCGATTAATCATAACTGAGGAGATGGACCTAATAGCTGAGACATACATTGCTGCTCATTATTGTGGTACAAGTCAGCCCAATGAGGCCAGGTTCCAGAAAATGGGGAGACATGAAGAGAGCTTGAGGTTTAAGACTTCAAAGGATCAGGCATAG

Protein sequence

MCLCPFEIIPHLCRVHHPSVRVHRRVPPLKKCVPNPSHFIRSSDSLPATALSDSLSASVFDSFPVAMSPSLSPSSQSTFCYILVLLLRAFISPCFNRLIITEEMDLIAETYIAAHYCGTSQPNEARFQKMGRHEESLRFKTSKDQA
Homology
[Close]
BLAST of MELO3C034398.2 vs. NCBI nr
Match: XP_016900105.1 (PREDICTED: uncharacterized protein LOC107990315 [Cucumis melo])

HSP 1 Score: 94.0 bits (232), Expect = 4.6e-16
Identity = 53/69 (76.81%), Postives = 59/69 (85.51%), Query Frame = 0 

Query: 29  LKKCVPNPSHFIRSSDSLPATALSDSLSASVFDSFPVAMSPSLSPSSQSTFCY--ILVLL 88
           L+K VP+PSHF+  SD LPATALSDSLSA+VFDS PV +SPSLSP SQSTFCY  +LVLL
Sbjct: 33  LQKRVPDPSHFVCLSDFLPATALSDSLSATVFDSLPVTLSPSLSPFSQSTFCYVLVLVLL 92

Query: 89  LRAFISPCF 96
           LRAFISP F
Sbjct: 93  LRAFISPGF 101

[Close]
BLAST of MELO3C034398.2 vs. TrEMBL
Match: tr|A0A1S4DWL6|A0A1S4DWL6_CUCME (uncharacterized protein LOC107990315 OS=Cucumis melo OX=3656 GN=LOC107990315 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.0e-16
Identity = 53/69 (76.81%), Postives = 59/69 (85.51%), Query Frame = 0 

Query: 29  LKKCVPNPSHFIRSSDSLPATALSDSLSASVFDSFPVAMSPSLSPSSQSTFCY--ILVLL 88
           L+K VP+PSHF+  SD LPATALSDSLSA+VFDS PV +SPSLSP SQSTFCY  +LVLL
Sbjct: 33  LQKRVPDPSHFVCLSDFLPATALSDSLSATVFDSLPVTLSPSLSPFSQSTFCYVLVLVLL 92

Query: 89  LRAFISPCF 96
           LRAFISP F
Sbjct: 93  LRAFISPGF 101

The following BLAST results are available for this feature:
BLAST of MELO3C034398.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016900105.14.6e-1676.81PREDICTED: uncharacterized protein LOC107990315 [Cucumis melo][more]
BLAST of MELO3C034398.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C034398.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C034398.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4DWL6|A0A1S4DWL6_CUCME3.0e-1676.81uncharacterized protein LOC107990315 OS=Cucumis melo OX=3656 GN=LOC107990315 PE=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034398.2.1MELO3C034398.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C034398.2Cucumber (Gy14) v2cgybmedB311
MELO3C034398.2Cucumber (Gy14) v1cgymedB459
MELO3C034398.2Cucurbita maxima (Rimu)cmamedB734
MELO3C034398.2Cucurbita moschata (Rifu)cmomedB729
MELO3C034398.2Cucurbita pepo (Zucchini)cpemedB430
MELO3C034398.2Wild cucumber (PI 183967)cpimedB365
MELO3C034398.2Cucumber (Chinese Long) v2cumedB360
MELO3C034398.2Bottle gourd (USVL1VR-Ls)lsimedB088
MELO3C034398.2Watermelon (Charleston Gray)medwcgB044
MELO3C034398.2Watermelon (97103) v1medwmB077
MELO3C034398.2Silver-seed gourdcarmedB0669
MELO3C034398.2Cucumber (Chinese Long) v3cucmedB363
MELO3C034398.2Watermelon (97103) v2medwmbB044