MELO3C034393.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C034393.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like
Location	chr10 : 14900605 .. 14902630 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCATAGAACTGAAAGAACGAAAGAGGTAAGAAGAAAGGGAGAGACGACTGTCGTGTGCCCTACCGTTGAGCCCAGTCGTCGTTGTCGTCGCCGCCATCTACCGCCGTGTATTAAGATAAGTTTAAAATCTAAAATTTTTAGGTTTAGGGTTGATAGTTTAGGGTTTTTTTTTAAAAAAATTGTTTTAGGTATTTTTCTATTTTTGTATTGAATGTGTGTTGAATTTGATGAATTGAAATTTGTTTTAGGGTTTTTTAGGTATTTGTTTGAATTGAAATTTGAGGGGGGGTTATGTTTGAATTCAAATTTAAAGGGAGAGGTGTTATGTTTGAATTGAAATTTGAAAGGAGGGGAAGGGGGTTTTGAATTGAAAATGTAATATGTGTTAATATTTGTTTTGGCTATTCTGCAGTTATGGTAGCCTGTTTGTGTTGAGTAACTTTGTTGTTGATTTGGGATGGCTATCCTGCAGTTATGGTAGCCTTTTTTGTTTTGAATTTGTTTCTATTTGGGATGGCTATCCTGCAGTTATGGTAGCCTTTTTTGTTTTGAATTTGTTTCTATTTGGGATGGTTATCCTGTAGTTATGGTAGCCTTTTTCGTTTTCAATTTGTTTATTTGGGATGGTTTTCAAGGGATGGTAATTGGATAGCTTATTAAGGTAGCGTTGTTGGAAGGGGTAGGTAGGATGTGAAGATACAATTTTTTTTACGTCATATACGTCACTGACGACTTCGTCGACGATGTGGATAACACTTGTCACATGCAAGTGACGACGACGAATTATAGTGACAACCCACGTACCCACATATTTATTTGTTTATTGAATGTTTGTTTTCTATGTTCACAGGCATTATGTCATACAGACGTAATAATTTTCTGGAGACGGATGATATGTTCCTCGAGTTTGAGGACGATTTAGATAACATTGCGGGAGGGTCGTCGTCCGTGGGCGACAATGCGAGTGAGTCTAAGAATTTCCTTCATTTTAACTTAGGATTATTTCATATTTTTTTCTCTAACATTATATGTTATTATAATTTATTGAGTAGGGTCGTCTTCTCAACCACCTGCGACTTTGACTCCTAAAAGACGTGCGCAGTCTCAACTCTTAAAGTTGGAGTGCCACGTTACTGTCAATGGGCGCATTTCGATGACGATCGCCCCCGAAGCGATAAAGCCTATTTTCCCACACGTCGTTCGCTTTAGGCAGGCGATAGGCGTGTGCGTGTGAAAGACATTTCCTGTCCGCTGCCTTAAGTGGGCAGACGTTGGCAGAGGATATATTGAGGTCGTCAAGGGCGACCTCCAGGTAATTAAGTCCACTACATATTTATGATTTCAATTGAAATATATCTAAGTTCACCAATCGAATGTGTTATTTTTGTAATGTGTAGCGGTTTTTTGTGCTTGATTTCAATGATCAAGCAATGAATACGTTTGTTGAGCATCAGATGCTCACCATCTTTAAGGAGTTTCGGGGCGACTGTCACAGACACTTCAAAAAGTACAGTGATCCCGAGGAGGCTCGTGCGAACCCACAAAACGTATTGGTTGGACGTCATGAGAATTGACACTTCCTTTGCGACCACTACATGAGTCGTGCATTCCAGGTATTTAGTTTGTCATGCTTAATTATGATTTCAACTTTTAACATGTATAAGAAATAAATAATATTATTGTTTTTATGCAGGAGCAATCACGGACGAACAAGGCTGTTGACAGAAACAACCTTACAATCACTGCAGCGGGTCAAAGTCATTTCTACAACGACAGCACGAGCTCAATGATAAAAAATGGAAGTCGGTCGACCATGTGGAGTTGTTTCGAAAAACACACATTCGAGCCAGGACGTTCGTATCGCAGACGCAGAGGATGCGCATGTAAATTATCGAACGAACTTTTATGTCCTTATTAATTATCCTCTTTTATTATATATTTTTGCGTTACCTAACTTAGTTTTTAAATTTGTTGCAGAATCAAATGCTGGAACTCTAGTCCCAGCCTACCCCAGAGGGTAG

mRNA sequence

ATGAATCATAGAACTGAAAGAACGAAAGAGGTAAGAAGAAAGGGAGAGACGACTGTCGTGTGCCCTACCGTTGAGCCCAGTCGTCGTTGTCGTCGCCGCCATCTACCGCCGTGTATTAAGATAAGTTTAAAATCTAAAATTTTTAGGTTTAGGGTTGATAGTTTAGGTTATGGTAGCCTGTTTGTGTTGAGTAACTTTGTTGTTGATTTGGGATGGCTATCCTGCAGTTATGGCATTATGTCATACAGACGTAATAATTTTCTGGAGACGGATGATATGTTCCTCGAGTTTGAGGACGATTTAGATAACATTGCGGGAGGGTCGTCGTCCGTGGGCGACAATGCGAGGTCGTCTTCTCAACCACCTGCGACTTTGACTCCTAAAAGACGTGCGCAGTCTCAACTCTTAAAGTTGGAGTGCCACGTTACTGTCAATGGGCGCATTTCGATGACGATCGCCCCCGAAGCGATAAAGCCTATTTTCCCACACGTCGTTCGCTTTAGGCAGGCGATAGGCTGGGCAGACGTTGGCAGAGGATATATTGAGGTCGTCAAGGGCGACCTCCAGCGGTTTTTTGTGCTTGATTTCAATGATCAAGCAATGAATACGTTTGTTGAGCATCAGATGCTCACCATCTTTAAGGAGTTTCGGGGCGACTGTCACAGACACTTCAAAAAGTACAGTGATCCCGAGGAGGCTCGTGCGAACCCACAAAACGAGCAATCACGGACGAACAAGGCTGTTGACAGAAACAACCTTACAATCACTGCAGCGGGTCAAAGTCATTTCTACAACGACAGCACGAGCTCAATGATAAAAAATGGAAGTCGGTCGACCATGTGGAGTTGTTTCGAAAAACACACATTCGAGCCAGGACAATCAAATGCTGGAACTCTAGTCCCAGCCTACCCCAGAGGGTAG

Coding sequence (CDS)

ATGAATCATAGAACTGAAAGAACGAAAGAGGTAAGAAGAAAGGGAGAGACGACTGTCGTGTGCCCTACCGTTGAGCCCAGTCGTCGTTGTCGTCGCCGCCATCTACCGCCGTGTATTAAGATAAGTTTAAAATCTAAAATTTTTAGGTTTAGGGTTGATAGTTTAGGTTATGGTAGCCTGTTTGTGTTGAGTAACTTTGTTGTTGATTTGGGATGGCTATCCTGCAGTTATGGCATTATGTCATACAGACGTAATAATTTTCTGGAGACGGATGATATGTTCCTCGAGTTTGAGGACGATTTAGATAACATTGCGGGAGGGTCGTCGTCCGTGGGCGACAATGCGAGGTCGTCTTCTCAACCACCTGCGACTTTGACTCCTAAAAGACGTGCGCAGTCTCAACTCTTAAAGTTGGAGTGCCACGTTACTGTCAATGGGCGCATTTCGATGACGATCGCCCCCGAAGCGATAAAGCCTATTTTCCCACACGTCGTTCGCTTTAGGCAGGCGATAGGCTGGGCAGACGTTGGCAGAGGATATATTGAGGTCGTCAAGGGCGACCTCCAGCGGTTTTTTGTGCTTGATTTCAATGATCAAGCAATGAATACGTTTGTTGAGCATCAGATGCTCACCATCTTTAAGGAGTTTCGGGGCGACTGTCACAGACACTTCAAAAAGTACAGTGATCCCGAGGAGGCTCGTGCGAACCCACAAAACGAGCAATCACGGACGAACAAGGCTGTTGACAGAAACAACCTTACAATCACTGCAGCGGGTCAAAGTCATTTCTACAACGACAGCACGAGCTCAATGATAAAAAATGGAAGTCGGTCGACCATGTGGAGTTGTTTCGAAAAACACACATTCGAGCCAGGACAATCAAATGCTGGAACTCTAGTCCCAGCCTACCCCAGAGGGTAG

Protein sequence

MNHRTERTKEVRRKGETTVVCPTVEPSRRCRRRHLPPCIKISLKSKIFRFRVDSLGYGSLFVLSNFVVDLGWLSCSYGIMSYRRNNFLETDDMFLEFEDDLDNIAGGSSSVGDNARSSSQPPATLTPKRRAQSQLLKLECHVTVNGRISMTIAPEAIKPIFPHVVRFRQAIGWADVGRGYIEVVKGDLQRFFVLDFNDQAMNTFVEHQMLTIFKEFRGDCHRHFKKYSDPEEARANPQNEQSRTNKAVDRNNLTITAAGQSHFYNDSTSSMIKNGSRSTMWSCFEKHTFEPGQSNAGTLVPAYPRG

Homology

[Close]

BLAST of MELO3C034393.2 vs. NCBI nr
Match: XP_016901035.1 (PREDICTED: uncharacterized protein LOC107991153 [Cucumis melo] >XP_016901036.1 PREDICTED: uncharacterized protein LOC107991153 [Cucumis melo])

HSP 1 Score: 233.4 bits (594), Expect = 1.0e-57
Identity = 123/173 (71.10%), Postives = 132/173 (76.30%), Query Frame = 0


Query: 80  MSYRRNNFLETDDMFLEFEDDLDNIAGGSSSVGDNARSSSQPPATLTPKRRAQSQLLKLE 139
           M Y RNNFLETD MFLEFEDDLDN+AGGSSSVGDNA SSSQPPAT TP+RR QS+LL+LE
Sbjct: 1   MPYARNNFLETDVMFLEFEDDLDNLAGGSSSVGDNAGSSSQPPATQTPRRRVQSRLLELE 60

Query: 140 CHVTVNGRISMTIAPEAIKPIFPHVVRFRQAIG-------------WADVGRGYIEVVKG 199
           CHV V G I M IAP A  PIFP+ +RF QAIG             WAD+ R YIEVVKG
Sbjct: 61  CHVVVYGCIPMMIAPGAEMPIFPYAIRFSQAIGVCVQKTFFVCYLKWADIDREYIEVVKG 120

Query: 200 DLQRFFVLDFNDQAMNTFVEHQMLTIFKEFRGDCHRHFKKYSDPEEARANPQN 240
           +LQRFFVLDFNDQA+N FVEHQMLT FKEF GDCHRHFK      EARANP N
Sbjct: 121 NLQRFFVLDFNDQAINRFVEHQMLTTFKEFWGDCHRHFK------EARANPPN 167

[Close]

BLAST of MELO3C034393.2 vs. NCBI nr
Match: ADN34071.1 (CACTA en-spm transposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 230.3 bits (586), Expect = 8.6e-57
Identity = 131/208 (62.98%), Postives = 143/208 (68.75%), Query Frame = 0


Query: 88  LETDDMFLEFEDDLDNIAGGSSSVGDNARSSSQPPATLTPKRRAQSQLLKLECHVTVNGR 147
           +ETDDMFL+FEDDLDNIAGGSSSVGDN  SSSQ  AT TP+RRAQS+LL+LE HV +NG 
Sbjct: 1   METDDMFLQFEDDLDNIAGGSSSVGDNTESSSQ-QATPTPRRRAQSRLLELERHVAINGC 60

Query: 148 ISMTIAPEAIKPIFPHVVRFRQAIG-------------WADVGRGYIEVVKGDLQRFFVL 207
           I MTIAP A KPI P+ V F QAIG             W DVGR YIEVVKGDLQRFFVL
Sbjct: 61  IPMTIAPGAEKPISPYAVHFSQAIGVCVRKTFPVRCLKWVDVGREYIEVVKGDLQRFFVL 120

Query: 208 DFNDQAMNTFVEHQMLTIFKEFRGDCHRHFKKYSDPEEARANPQNE------------QS 267
           DFNDQAMN FVEHQM+T FKEF+ DCHRHFKKYSDPEEARANP N               
Sbjct: 121 DFNDQAMNRFVEHQMVTTFKEFQVDCHRHFKKYSDPEEARANPPNALVGRDEDWHFLYDH 180

Query: 268 RTNKAVDRNNLTITAAGQSHFYNDSTSS 271
              +A    + T  AA Q   YN S+ S
Sbjct: 181 YIRRAFQEQSWTNKAARQKQPYNHSSGS 207

[Close]

BLAST of MELO3C034393.2 vs. NCBI nr
Match: XP_016901155.1 (PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like [Cucumis melo])

HSP 1 Score: 170.6 bits (431), Expect = 8.1e-39
Identity = 96/161 (59.63%), Postives = 108/161 (67.08%), Query Frame = 0


Query: 79  IMSYRRNNFLETDDMFLEFEDDLDNIAGGSSSVGDNARSSSQPPATLTPKRRAQSQLLKL 138
           I S+ RNNFLETD MFL+F  DLDN+AGGSSS+ +N+ SSSQP ATLTPKR  QS+LL+L
Sbjct: 51  ISSFPRNNFLETDVMFLKFAGDLDNLAGGSSSMDENSESSSQPSATLTPKRHTQSRLLEL 110

Query: 139 ECHVTVNGRISMTIAPEAIKPIFPHVVRFRQAIGWADVGRGYIEVVKGDLQRFFVLDFND 198
           EC+VT                                 GR YIEVVK DLQ FFVLDF+D
Sbjct: 111 ECYVT---------------------------------GREYIEVVKADLQ-FFVLDFSD 170

Query: 199 QAMNTFVEHQMLTIFKEFRGDCHRHFKKYSDPEEARANPQN 240
           QAMNT VE+QM   FKEF GDCH+ FKKYSDPEEARANP N
Sbjct: 171 QAMNTSVEYQMSNTFKEFWGDCHKQFKKYSDPEEARANPPN 177

[Close]

BLAST of MELO3C034393.2 vs. NCBI nr
Match: XP_016902990.1 (PREDICTED: uncharacterized protein LOC107991989 [Cucumis melo])

HSP 1 Score: 84.3 bits (207), Expect = 7.6e-13
Identity = 43/58 (74.14%), Postives = 46/58 (79.31%), Query Frame = 0


Query: 81  SYRRNNFLETDDMFLEFEDDLDNIAGGSSSVGDNARSSSQPPATLTPKRRAQSQLLKL 139
           SY R+NFLETD MFLEFED LDN  GGSSSVGDN  SSSQ P TLTP+R  QS+LL L
Sbjct: 4   SYPRHNFLETDTMFLEFEDQLDNFTGGSSSVGDNVGSSSQQPGTLTPRRHVQSRLLGL 61

[Close]

BLAST of MELO3C034393.2 vs. NCBI nr
Match: XP_011648549.1 (PREDICTED: (R)-mandelonitrile lyase 1-like [Cucumis sativus])

HSP 1 Score: 81.6 bits (200), Expect = 4.9e-12
Identity = 65/164 (39.63%), Postives = 88/164 (53.66%), Query Frame = 0


Query: 62  VLSNFVVDLGWLSCSY---GIMSYRRNNFLETDDMFLEFEDDLDNIAGGSSSVGDNARSS 121
           V  +F  D+  LS S    GIMS+     +   D++L   D LDN A G S VG+ +  +
Sbjct: 665 VAHDFRNDVDQLSLSQSGSGIMSFPSG--IREGDVYLNL-DTLDN-AEGLSLVGETS-DA 724

Query: 122 SQPPATLTPKRRAQSQLLKLECHVTVNGRISMTIAPEAIKPIFPHVVRFR---------- 181
           SQ   T T +RR  S+ L+LE ++  NG+I ++I  E  KPI PH +RF           
Sbjct: 725 SQFTLTATLRRRQHSRNLELERYILQNGKILISIPLEGDKPISPHPIRFSCTIDVLTRDT 784

Query: 182 ---QAIGWADVGRGYIEVVKGDLQRFFVLDFNDQAMNTFVEHQM 210
              Q + W DV + YIEVVK    ++FVLDF D  +  FVEHQM
Sbjct: 785 FPIQILKWVDVPQEYIEVVK----QWFVLDFKDLTLTRFVEHQM 819

[Close]

BLAST of MELO3C034393.2 vs. TrEMBL
Match: tr|A0A1S4DZ93|A0A1S4DZ93_CUCME (uncharacterized protein LOC107991153 OS=Cucumis melo OX=3656 GN=LOC107991153 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 6.7e-58
Identity = 123/173 (71.10%), Postives = 132/173 (76.30%), Query Frame = 0


Query: 80  MSYRRNNFLETDDMFLEFEDDLDNIAGGSSSVGDNARSSSQPPATLTPKRRAQSQLLKLE 139
           M Y RNNFLETD MFLEFEDDLDN+AGGSSSVGDNA SSSQPPAT TP+RR QS+LL+LE
Sbjct: 1   MPYARNNFLETDVMFLEFEDDLDNLAGGSSSVGDNAGSSSQPPATQTPRRRVQSRLLELE 60

Query: 140 CHVTVNGRISMTIAPEAIKPIFPHVVRFRQAIG-------------WADVGRGYIEVVKG 199
           CHV V G I M IAP A  PIFP+ +RF QAIG             WAD+ R YIEVVKG
Sbjct: 61  CHVVVYGCIPMMIAPGAEMPIFPYAIRFSQAIGVCVQKTFFVCYLKWADIDREYIEVVKG 120

Query: 200 DLQRFFVLDFNDQAMNTFVEHQMLTIFKEFRGDCHRHFKKYSDPEEARANPQN 240
           +LQRFFVLDFNDQA+N FVEHQMLT FKEF GDCHRHFK      EARANP N
Sbjct: 121 NLQRFFVLDFNDQAINRFVEHQMLTTFKEFWGDCHRHFK------EARANPPN 167

[Close]

BLAST of MELO3C034393.2 vs. TrEMBL
Match: tr|E5GC72|E5GC72_CUCME (CACTA en-spm transposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 5.7e-57
Identity = 131/208 (62.98%), Postives = 143/208 (68.75%), Query Frame = 0


Query: 88  LETDDMFLEFEDDLDNIAGGSSSVGDNARSSSQPPATLTPKRRAQSQLLKLECHVTVNGR 147
           +ETDDMFL+FEDDLDNIAGGSSSVGDN  SSSQ  AT TP+RRAQS+LL+LE HV +NG 
Sbjct: 1   METDDMFLQFEDDLDNIAGGSSSVGDNTESSSQ-QATPTPRRRAQSRLLELERHVAINGC 60

Query: 148 ISMTIAPEAIKPIFPHVVRFRQAIG-------------WADVGRGYIEVVKGDLQRFFVL 207
           I MTIAP A KPI P+ V F QAIG             W DVGR YIEVVKGDLQRFFVL
Sbjct: 61  IPMTIAPGAEKPISPYAVHFSQAIGVCVRKTFPVRCLKWVDVGREYIEVVKGDLQRFFVL 120

Query: 208 DFNDQAMNTFVEHQMLTIFKEFRGDCHRHFKKYSDPEEARANPQNE------------QS 267
           DFNDQAMN FVEHQM+T FKEF+ DCHRHFKKYSDPEEARANP N               
Sbjct: 121 DFNDQAMNRFVEHQMVTTFKEFQVDCHRHFKKYSDPEEARANPPNALVGRDEDWHFLYDH 180

Query: 268 RTNKAVDRNNLTITAAGQSHFYNDSTSS 271
              +A    + T  AA Q   YN S+ S
Sbjct: 181 YIRRAFQEQSWTNKAARQKQPYNHSSGS 207

[Close]

BLAST of MELO3C034393.2 vs. TrEMBL
Match: tr|A0A1S4DZJ7|A0A1S4DZJ7_CUCME (LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103493054 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 5.4e-39
Identity = 96/161 (59.63%), Postives = 108/161 (67.08%), Query Frame = 0


Query: 79  IMSYRRNNFLETDDMFLEFEDDLDNIAGGSSSVGDNARSSSQPPATLTPKRRAQSQLLKL 138
           I S+ RNNFLETD MFL+F  DLDN+AGGSSS+ +N+ SSSQP ATLTPKR  QS+LL+L
Sbjct: 51  ISSFPRNNFLETDVMFLKFAGDLDNLAGGSSSMDENSESSSQPSATLTPKRHTQSRLLEL 110

Query: 139 ECHVTVNGRISMTIAPEAIKPIFPHVVRFRQAIGWADVGRGYIEVVKGDLQRFFVLDFND 198
           EC+VT                                 GR YIEVVK DLQ FFVLDF+D
Sbjct: 111 ECYVT---------------------------------GREYIEVVKADLQ-FFVLDFSD 170

Query: 199 QAMNTFVEHQMLTIFKEFRGDCHRHFKKYSDPEEARANPQN 240
           QAMNT VE+QM   FKEF GDCH+ FKKYSDPEEARANP N
Sbjct: 171 QAMNTSVEYQMSNTFKEFWGDCHKQFKKYSDPEEARANPPN 177

[Close]

BLAST of MELO3C034393.2 vs. TrEMBL
Match: tr|A0A1S4E4T7|A0A1S4E4T7_CUCME (uncharacterized protein LOC107991989 OS=Cucumis melo OX=3656 GN=LOC107991989 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 5.0e-13
Identity = 43/58 (74.14%), Postives = 46/58 (79.31%), Query Frame = 0


Query: 81  SYRRNNFLETDDMFLEFEDDLDNIAGGSSSVGDNARSSSQPPATLTPKRRAQSQLLKL 139
           SY R+NFLETD MFLEFED LDN  GGSSSVGDN  SSSQ P TLTP+R  QS+LL L
Sbjct: 4   SYPRHNFLETDTMFLEFEDQLDNFTGGSSSVGDNVGSSSQQPGTLTPRRHVQSRLLGL 61

[Close]

BLAST of MELO3C034393.2 vs. TrEMBL
Match: tr|E5GCP2|E5GCP2_CUCME (NBS-LRR type resistance protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.9e-07
Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 0


Query: 243 RTNKAVDRNNLTITAAGQSHFYNDSTSSMIKNGSRSTMWSCFEKHTFEPGQS 295
           R  + +DR++LTI  AG SHFYNDS SS+ + GSRS +W+C EKHTFE G S
Sbjct: 21  RRTRLLDRSSLTIIVAGPSHFYNDSMSSLKEEGSRSIVWNCSEKHTFELGHS 72

The following BLAST results are available for this feature:

BLAST of MELO3C034393.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901035.1	1.0e-57	71.10	PREDICTED: uncharacterized protein LOC107991153 [Cucumis melo] >XP_016901036.1 P...	[more]
ADN34071.1	8.6e-57	62.98	CACTA en-spm transposon protein [Cucumis melo subsp. melo]	[more]
XP_016901155.1	8.1e-39	59.63	PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochond...	[more]
XP_016902990.1	7.6e-13	74.14	PREDICTED: uncharacterized protein LOC107991989 [Cucumis melo]	[more]
XP_011648549.1	4.9e-12	39.63	PREDICTED: (R)-mandelonitrile lyase 1-like [Cucumis sativus]	[more]

BLAST of MELO3C034393.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C034393.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C034393.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DZ93\|A0A1S4DZ93_CUCME	6.7e-58	71.10	uncharacterized protein LOC107991153 OS=Cucumis melo OX=3656 GN=LOC107991153 PE=...	[more]
tr\|E5GC72\|E5GC72_CUCME	5.7e-57	62.98	CACTA en-spm transposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S4DZJ7\|A0A1S4DZJ7_CUCME	5.4e-39	59.63	LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like O...	[more]
tr\|A0A1S4E4T7\|A0A1S4E4T7_CUCME	5.0e-13	74.14	uncharacterized protein LOC107991989 OS=Cucumis melo OX=3656 GN=LOC107991989 PE=...	[more]
tr\|E5GCP2\|E5GCP2_CUCME	1.9e-07	59.62	NBS-LRR type resistance protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0008483	transaminase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034393.2.1	MELO3C034393.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..250

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C034393.2	Cucumber (Chinese Long) v2	cumedB349
MELO3C034393.2	Bottle gourd (USVL1VR-Ls)	lsimedB088
MELO3C034393.2	Bottle gourd (USVL1VR-Ls)	lsimedB300
MELO3C034393.2	Watermelon (Charleston Gray)	medwcgB044
MELO3C034393.2	Watermelon (Charleston Gray)	medwcgB065
MELO3C034393.2	Watermelon (97103) v1	medwmB077
MELO3C034393.2	Silver-seed gourd	carmedB0671
MELO3C034393.2	Cucumber (Chinese Long) v3	cucmedB363
MELO3C034393.2	Watermelon (97103) v2	medwmbB044
MELO3C034393.2	Watermelon (97103) v2	medwmbB062
MELO3C034393.2	Wax gourd	medwgoB084
MELO3C034393.2	Cucumber (Gy14) v2	cgybmedB311
MELO3C034393.2	Cucumber (Gy14) v1	cgymedB238
MELO3C034393.2	Cucurbita maxima (Rimu)	cmamedB737
MELO3C034393.2	Cucurbita maxima (Rimu)	cmamedB742
MELO3C034393.2	Cucurbita moschata (Rifu)	cmomedB738
MELO3C034393.2	Cucurbita pepo (Zucchini)	cpemedB441
MELO3C034393.2	Wild cucumber (PI 183967)	cpimedB351