MELO3C034338.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C034338.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr10 : 10446987 .. 10448042 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGAAAAGAAAGAAAAGAGAAGAGTACCAAACCTCTTGCACAATTTTTTCTTATACACAAAACATTTATCCCCAAATCCTTCTGCACTATTTTCTCTCGCCCAAAGAAGAATAGATACAGCGTTTCATTCTTCTTCTTTATCTCTCTGCCTCTCTTGCCCTTTTCCTTCTTCTTCCTTCTCCTCTCTTAGATTCATCAAAAACATTTCCAATCCCTTCTTCTCCCCAAGCCCTAGTTTCCCACTTTTTGTTTCTTCCAGGCGCATCATCTCCATTTGTTGTCTTCAGTCGTCCCGTGCTTCTCCTCGCTCCCTTCTCTGTCTGGTACATTCTTCGTTCATTCCTATAGTACTCCTCTTTGTTGCTTCGTTCTTCGATTTGTTCTTTGCTCTTCGAATTCCTTTTTACTTAACCGCCATTAATCGCCTTCATTTAGTTTTTCTTAATGAATTCGAACGTGTTTGACGTGGGTCTTCATGTTTAGTTTTTGTTTTTTTTCTTTTGCCTGCAAACTGTTTGAGAAAATGACTGATAGATTAATTTCTAGATTATTATTCCTTGGGTATGAAATTTTCTTCCTTGTTGACTAATAAACTCCGAGGATGATTGCACAAGTTCTACGCTCATTTTGCTTTTTAAGTTCTACTCTAATTTTGGTCTTCTAGCTCTTGGATGCACATTTGATATATATGAGTTATTGGACTTTGAATGTTTGAGGAAAAAAGTTTGGAGGAAGCCGTTAGAAAATTGGAGGCATATAGACAAAAATTTCCAAGCTTGGAAAGGTAATTCCATCCTTTTTAAGTTATCTTCAAGATGGTTAAATGCCTACATCCACTTAGAATGAAGTATTTCCTTTTGTTTTGCTTTTCAAGTTTTGTAAAGATTTTACAAATGAAACTCATACCTCTCAATCTCTTTTATATGCAGAAATTTAAAGAGGAAACAACTGTTGGATTAGTTTTGAGGTTACAACAGAAGTAGGTAATTTGTTTTAAATTACTTTTATACAACATCAGATTACAAATGCTAGAGGTTCTTAAGGATACCTAA

mRNA sequence

ATGAAAGAAAAGAAAGAAAAGAGAAGAGTACCAAACCTCTTGCACAATTTTTTCTTATACACAAAACATTTATCCCCAAATCCTTCTGCACTATTTTCTCTCGCCCAAAGAAGAATAGATACAGCGTTTCATTCTTCTTCTTTATCTCTCTGCCTCTCTTGCCCTTTTCCTTCTTCTTCCTTCTCCTCTCTTAGATTCATCAAAAACATTTCCAATCCCTTCTTCTCCCCAAGCCCTAGTTTCCCACTTTTTGTTTCTTCCAGGCGCATCATCTCCATTTGTTGTCTTCAGTCGTCCCGTGCTTCTCCTCGCTCCCTTCTCTGTCTGGTACATTCTTCGTTCATTCCTATAGTACTCCTCTTTGTTGCTTCGTTCTTCGATTTGTTCTTTGCTCTTCGAATTCCTTTTTACTTAACCGCCATTAATCGCCTTCATTTAGTTTTTCTTAATGAATTCGAACGTAAATTTAAAGAGGAAACAACTGTTGGATTAGTTTTGAGGTTACAACAGAAATTACAAATGCTAGAGGTTCTTAAGGATACCTAA

Coding sequence (CDS)

ATGAAAGAAAAGAAAGAAAAGAGAAGAGTACCAAACCTCTTGCACAATTTTTTCTTATACACAAAACATTTATCCCCAAATCCTTCTGCACTATTTTCTCTCGCCCAAAGAAGAATAGATACAGCGTTTCATTCTTCTTCTTTATCTCTCTGCCTCTCTTGCCCTTTTCCTTCTTCTTCCTTCTCCTCTCTTAGATTCATCAAAAACATTTCCAATCCCTTCTTCTCCCCAAGCCCTAGTTTCCCACTTTTTGTTTCTTCCAGGCGCATCATCTCCATTTGTTGTCTTCAGTCGTCCCGTGCTTCTCCTCGCTCCCTTCTCTGTCTGGTACATTCTTCGTTCATTCCTATAGTACTCCTCTTTGTTGCTTCGTTCTTCGATTTGTTCTTTGCTCTTCGAATTCCTTTTTACTTAACCGCCATTAATCGCCTTCATTTAGTTTTTCTTAATGAATTCGAACGTAAATTTAAAGAGGAAACAACTGTTGGATTAGTTTTGAGGTTACAACAGAAATTACAAATGCTAGAGGTTCTTAAGGATACCTAA

Protein sequence

MKEKKEKRRVPNLLHNFFLYTKHLSPNPSALFSLAQRRIDTAFHSSSLSLCLSCPFPSSSFSSLRFIKNISNPFFSPSPSFPLFVSSRRIISICCLQSSRASPRSLLCLVHSSFIPIVLLFVASFFDLFFALRIPFYLTAINRLHLVFLNEFERKFKEETTVGLVLRLQQKLQMLEVLKDT
Homology
[Close]
BLAST of MELO3C034338.2 vs. NCBI nr
Match: XP_016902535.1 (PREDICTED: uncharacterized protein LOC103499160 [Cucumis melo])

HSP 1 Score: 163.3 bits (412), Expect = 7.6e-37
Identity = 89/108 (82.41%), Postives = 95/108 (87.96%), Query Frame = 0 

Query: 2   KEKKEKRRVPNLLHNFFLYTKHLSPNPSALFSLAQRRIDTAFHSSSLSLCLSCPFPSSSF 61
           + KKEKR+VPNLLH+FFL TKHLSPNPS LFSLAQ R  T+FHSSSLSLCLSC FPSSS 
Sbjct: 28  ERKKEKRKVPNLLHDFFLCTKHLSPNPSTLFSLAQGRTGTSFHSSSLSLCLSCLFPSSSS 87

Query: 62  SSLRFIKNISNPFFSPSPSFPLFVSSRRIISICCLQSSRASPRSLLCL 110
           SSLRFI NISNPFFSPSP FPLFVSSR +IS+C LQSSRASPRSLL L
Sbjct: 88  SSLRFI-NISNPFFSPSPCFPLFVSSRHVISVCHLQSSRASPRSLLHL 134

[Close]
BLAST of MELO3C034338.2 vs. NCBI nr
Match: XP_008447319.1 (PREDICTED: uncharacterized protein LOC103489789 [Cucumis melo])

HSP 1 Score: 91.7 bits (226), Expect = 2.8e-15
Identity = 65/119 (54.62%), Postives = 70/119 (58.82%), Query Frame = 0 

Query: 2   KEKKEKRRVPNLLHNFFLYTKHLSPNPSALFSLAQRRIDTAFHSSSLSLCLSCPFPSSSF 61
           KE+KEK      LH+FF YTKHLSPNP ALFSLAQ R  T F SSSL LCLSCPFPSSS 
Sbjct: 91  KERKEK-----ALHDFFFYTKHLSPNPFALFSLAQGRTGTTFCSSSLFLCLSCPFPSSS- 150

Query: 62  SSLRFIKNISNPFFSPSPSFPLFVSSRRIISICCLQSSRASPRSLLCLVHSSFIPIVLL 121
           S                       SSRR+I +C LQSSRASP SLL L     I  +LL
Sbjct: 151 SXXXXXXXXXXXXXXXXXXXXXXXSSRRVIFVCRLQSSRASPCSLLHLRIKITILCILL 203

[Close]
BLAST of MELO3C034338.2 vs. TrEMBL
Match: tr|A0A1S4E3H9|A0A1S4E3H9_CUCME (uncharacterized protein LOC103499160 OS=Cucumis melo OX=3656 GN=LOC103499160 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.1e-37
Identity = 89/108 (82.41%), Postives = 95/108 (87.96%), Query Frame = 0 

Query: 2   KEKKEKRRVPNLLHNFFLYTKHLSPNPSALFSLAQRRIDTAFHSSSLSLCLSCPFPSSSF 61
           + KKEKR+VPNLLH+FFL TKHLSPNPS LFSLAQ R  T+FHSSSLSLCLSC FPSSS 
Sbjct: 28  ERKKEKRKVPNLLHDFFLCTKHLSPNPSTLFSLAQGRTGTSFHSSSLSLCLSCLFPSSSS 87

Query: 62  SSLRFIKNISNPFFSPSPSFPLFVSSRRIISICCLQSSRASPRSLLCL 110
           SSLRFI NISNPFFSPSP FPLFVSSR +IS+C LQSSRASPRSLL L
Sbjct: 88  SSLRFI-NISNPFFSPSPCFPLFVSSRHVISVCHLQSSRASPRSLLHL 134

[Close]
BLAST of MELO3C034338.2 vs. TrEMBL
Match: tr|A0A1S3BH46|A0A1S3BH46_CUCME (uncharacterized protein LOC103489789 OS=Cucumis melo OX=3656 GN=LOC103489789 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.9e-15
Identity = 65/119 (54.62%), Postives = 70/119 (58.82%), Query Frame = 0 

Query: 2   KEKKEKRRVPNLLHNFFLYTKHLSPNPSALFSLAQRRIDTAFHSSSLSLCLSCPFPSSSF 61
           KE+KEK      LH+FF YTKHLSPNP ALFSLAQ R  T F SSSL LCLSCPFPSSS 
Sbjct: 91  KERKEK-----ALHDFFFYTKHLSPNPFALFSLAQGRTGTTFCSSSLFLCLSCPFPSSS- 150

Query: 62  SSLRFIKNISNPFFSPSPSFPLFVSSRRIISICCLQSSRASPRSLLCLVHSSFIPIVLL 121
           S                       SSRR+I +C LQSSRASP SLL L     I  +LL
Sbjct: 151 SXXXXXXXXXXXXXXXXXXXXXXXSSRRVIFVCRLQSSRASPCSLLHLRIKITILCILL 203

The following BLAST results are available for this feature:
BLAST of MELO3C034338.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016902535.17.6e-3782.41PREDICTED: uncharacterized protein LOC103499160 [Cucumis melo][more]
XP_008447319.12.8e-1554.62PREDICTED: uncharacterized protein LOC103489789 [Cucumis melo][more]
BLAST of MELO3C034338.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C034338.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C034338.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E3H9|A0A1S4E3H9_CUCME5.1e-3782.41uncharacterized protein LOC103499160 OS=Cucumis melo OX=3656 GN=LOC103499160 PE=... [more]
tr|A0A1S3BH46|A0A1S3BH46_CUCME1.9e-1554.62uncharacterized protein LOC103489789 OS=Cucumis melo OX=3656 GN=LOC103489789 PE=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034338.2.1MELO3C034338.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C034338.2Cucumber (Chinese Long) v3cucmedB165
MELO3C034338.2Cucumber (Chinese Long) v3cucmedB362
MELO3C034338.2Watermelon (97103) v2medwmbB040
MELO3C034338.2Watermelon (97103) v2medwmbB061
MELO3C034338.2Wax gourdmedwgoB051
MELO3C034338.2Wax gourdmedwgoB083
MELO3C034338.2Cucumber (Gy14) v2cgybmedB146
MELO3C034338.2Cucumber (Gy14) v2cgybmedB312
MELO3C034338.2Cucumber (Gy14) v1cgymedB304
MELO3C034338.2Cucumber (Gy14) v1cgymedB597
MELO3C034338.2Cucurbita maxima (Rimu)cmamedB238
MELO3C034338.2Cucurbita maxima (Rimu)cmamedB738
MELO3C034338.2Cucurbita maxima (Rimu)cmamedB741
MELO3C034338.2Cucurbita moschata (Rifu)cmomedB733
MELO3C034338.2Cucurbita moschata (Rifu)cmomedB736
MELO3C034338.2Cucurbita pepo (Zucchini)cpemedB436
MELO3C034338.2Cucurbita pepo (Zucchini)cpemedB440
MELO3C034338.2Cucurbita pepo (Zucchini)cpemedB654
MELO3C034338.2Wild cucumber (PI 183967)cpimedB163
MELO3C034338.2Wild cucumber (PI 183967)cpimedB352
MELO3C034338.2Cucumber (Chinese Long) v2cumedB163
MELO3C034338.2Cucumber (Chinese Long) v2cumedB350
MELO3C034338.2Melon (DHL92) v3.6.1medmedB030
MELO3C034338.2Bottle gourd (USVL1VR-Ls)lsimedB246
MELO3C034338.2Bottle gourd (USVL1VR-Ls)lsimedB297
MELO3C034338.2Watermelon (Charleston Gray)medwcgB040
MELO3C034338.2Watermelon (Charleston Gray)medwcgB064
MELO3C034338.2Watermelon (97103) v1medwmB045
MELO3C034338.2Watermelon (97103) v1medwmB054
MELO3C034338.2Silver-seed gourdcarmedB0091
MELO3C034338.2Silver-seed gourdcarmedB0672