MELO3C034202.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C034202.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	subtilisin-like protease SBT3.17 isoform X1
Location	chr10 : 15750186 .. 15750625 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTTAATGATGATGTTGCACTAGGTGATTCACCTGATCAAGACATCCCCATGATGTATAGCCAAGGAGTGCATATGTCACCAGATGAGATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAAAAAAAATTGTTCAAGTGGAAGTAAGAGAAAATGAGGTAGTGAACATTATGAAACGGTAGAGGTGACCAGGAGTGTAATGGAACTTGGAAATGATCAATTAAAGGCAATTGCAAATTGGCCAAAAGAGAAGCGTGCAATAGAGATCGAATTGCATGCTGAAGTTGTGAAACAGCTGCAAGATATCCCTGAACTACAAAGCCGAGATAGGGCAAAGCTTATGCAAATCATATTTCGTAGTGTGGAGGTCATTGAGGGATTCTTGTAGATTCCAATAGAACTTAAATTAGAGAATTGCAATATTCTCTTGCAAAATTAG

mRNA sequence

TGTTTAATGATGATGTTGCACTAGGTGATTCACCTGATCAAGACATCCCCATGATGTATAGCCAAGGAGTGCATATGTCACCAGATGAGATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAAAAAAAATTGTTCAAGTGGAAGTAAGAGAAAATGAGGTAGTGAACATTATGAAACGGTAGAGGTGACCAGGAGTGTAATGGAACTTGGAAATGATCAATTAAAGGCAATTGCAAATTGGCCAAAAGAGAAGCGTGCAATAGAGATCGAATTGCATGCTGAAGTTGTGAAACAGCTGCAAGATATCCCTGAACTACAAAGCCGAGATAGGGCAAAGCTTATGCAAATCATATTTCGTAGTGTGGAGGTCATTGAGGGATTCTTGTAGATTCCAATAGAACTTAAATTAGAGAATTGCAATATTCTCTTGCAAAATTAG

Coding sequence (CDS)

ATGGAACTTGGAAATGATCAATTAAAGGCAATTGCAAATTGGCCAAAAGAGAAGCGTGCAATAGAGATCGAATTGCATGCTGAAGTTGTGAAACAGCTGCAAGATATCCCTGAACTACAAAGCCGAGATAGGGCAAAGCTTATGCAAATCATATTTCGTAGTGTGGAGGTCATTGAGGGATTCTTGTAG

Protein sequence

MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL

Homology

[Close]

BLAST of MELO3C034202.2 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo])

HSP 1 Score: 102.4 bits (254), Expect = 5.5e-19
Identity = 48/62 (77.42%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 1   MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEG 60
           ME GN+QLKAIA+WPKEKRA+E+E+ A+VVKQLQDIP+L+S+DRAKLMQI+FRS+E IEG
Sbjct: 226 MEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEG 285

Query: 61  FL 63
           FL
Sbjct: 286 FL 287

[Close]

BLAST of MELO3C034202.2 vs. NCBI nr
Match: ADN33753.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 100.5 bits (249), Expect = 2.1e-18
Identity = 48/61 (78.69%), Postives = 54/61 (88.52%), Query Frame = 0


Query: 1   MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEG 60
           ME GNDQLKA  +W K+K + E+ELHAEVVKQLQDIPEL+SRDRAKLMQI+FRSVE IEG
Sbjct: 68  MEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQLQDIPELRSRDRAKLMQILFRSVEAIEG 127

Query: 61  F 62
           F
Sbjct: 128 F 128

[Close]

BLAST of MELO3C034202.2 vs. NCBI nr
Match: KGN46631.1 (hypothetical protein Csa_6G116150 [Cucumis sativus])

HSP 1 Score: 95.9 bits (237), Expect = 5.1e-17
Identity = 48/62 (77.42%), Postives = 53/62 (85.48%), Query Frame = 0


Query: 1   MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEG 60
           ME+ NDQLKAIANW KEKRA E+ELH EVVKQLQDI EL++RDR KLMQIIF  V+ IEG
Sbjct: 48  MEVRNDQLKAIANWSKEKRATEVELHVEVVKQLQDISELRTRDRVKLMQIIFHMVDDIEG 107

Query: 61  FL 63
           FL
Sbjct: 108 FL 109

[Close]

BLAST of MELO3C034202.2 vs. NCBI nr
Match: KGN66636.1 (hypothetical protein Csa_1G651700 [Cucumis sativus])

HSP 1 Score: 58.5 bits (140), Expect = 9.1e-06
Identity = 29/40 (72.50%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 9   KAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLM 49
           KAI  WPKE+RA ++EL  EVVKQLQDIPELQ+R R KLM
Sbjct: 83  KAIVVWPKEERATKVELCVEVVKQLQDIPELQNRVRVKLM 122

[Close]

BLAST of MELO3C034202.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 53.9 bits (128), Expect = 2.2e-04
Identity = 26/62 (41.94%), Postives = 40/62 (64.52%), Query Frame = 0


Query: 1   MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEG 60
           +E GN+QL  IA WP  +R    +   E+V+ L+ IPEL   DR +LM+I+ R+V+ ++ 
Sbjct: 577 IEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKA 636

Query: 61  FL 63
           FL
Sbjct: 637 FL 638

[Close]

BLAST of MELO3C034202.2 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.6e-19
Identity = 48/62 (77.42%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 1   MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEG 60
           ME GN+QLKAIA+WPKEKRA+E+E+ A+VVKQLQDIP+L+S+DRAKLMQI+FRS+E IEG
Sbjct: 226 MEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEG 285

Query: 61  FL 63
           FL
Sbjct: 286 FL 287

[Close]

BLAST of MELO3C034202.2 vs. TrEMBL
Match: tr|E5GBB1|E5GBB1_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-18
Identity = 48/61 (78.69%), Postives = 54/61 (88.52%), Query Frame = 0


Query: 1   MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEG 60
           ME GNDQLKA  +W K+K + E+ELHAEVVKQLQDIPEL+SRDRAKLMQI+FRSVE IEG
Sbjct: 68  MEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQLQDIPELRSRDRAKLMQILFRSVEAIEG 127

Query: 61  F 62
           F
Sbjct: 128 F 128

[Close]

BLAST of MELO3C034202.2 vs. TrEMBL
Match: tr|A0A0A0KFW0|A0A0A0KFW0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G116150 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.4e-17
Identity = 48/62 (77.42%), Postives = 53/62 (85.48%), Query Frame = 0


Query: 1   MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEG 60
           ME+ NDQLKAIANW KEKRA E+ELH EVVKQLQDI EL++RDR KLMQIIF  V+ IEG
Sbjct: 48  MEVRNDQLKAIANWSKEKRATEVELHVEVVKQLQDISELRTRDRVKLMQIIFHMVDDIEG 107

Query: 61  FL 63
           FL
Sbjct: 108 FL 109

[Close]

BLAST of MELO3C034202.2 vs. TrEMBL
Match: tr|A0A0A0M343|A0A0A0M343_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G651700 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.0e-06
Identity = 29/40 (72.50%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 9   KAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLM 49
           KAI  WPKE+RA ++EL  EVVKQLQDIPELQ+R R KLM
Sbjct: 83  KAIVVWPKEERATKVELCVEVVKQLQDIPELQNRVRVKLM 122

[Close]

BLAST of MELO3C034202.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.5e-04
Identity = 26/62 (41.94%), Postives = 40/62 (64.52%), Query Frame = 0


Query: 1   MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEG 60
           +E GN+QL  IA WP  +R    +   E+V+ L+ IPEL   DR +LM+I+ R+V+ ++ 
Sbjct: 577 IEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKA 636

Query: 61  FL 63
           FL
Sbjct: 637 FL 638

The following BLAST results are available for this feature:

BLAST of MELO3C034202.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441954.1	5.5e-19	77.42	PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]	[more]
ADN33753.1	2.1e-18	78.69	hypothetical protein [Cucumis melo subsp. melo]	[more]
KGN46631.1	5.1e-17	77.42	hypothetical protein Csa_6G116150 [Cucumis sativus]	[more]
KGN66636.1	9.1e-06	72.50	hypothetical protein Csa_1G651700 [Cucumis sativus]	[more]
ADN34114.1	2.2e-04	41.94	retrotransposon protein [Cucumis melo subsp. melo]	[more]

BLAST of MELO3C034202.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C034202.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C034202.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B4L3\|A0A1S3B4L3_CUCME	3.6e-19	77.42	uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=...	[more]
tr\|E5GBB1\|E5GBB1_CUCME	1.4e-18	78.69	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A0A0KFW0\|A0A0A0KFW0_CUCSA	3.4e-17	77.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G116150 PE=4 SV=1	[more]
tr\|A0A0A0M343\|A0A0A0M343_CUCSA	6.0e-06	72.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G651700 PE=4 SV=1	[more]
tr\|E5GCB5\|E5GCB5_CUCME	1.5e-04	41.94	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008233	peptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034202.2.1	MELO3C034202.2.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C034202.2	Cucumber (Gy14) v2	cgybmedB311
MELO3C034202.2	Cucumber (Gy14) v1	cgymedB459
MELO3C034202.2	Cucurbita maxima (Rimu)	cmamedB734
MELO3C034202.2	Cucurbita moschata (Rifu)	cmomedB729
MELO3C034202.2	Cucurbita pepo (Zucchini)	cpemedB430
MELO3C034202.2	Wild cucumber (PI 183967)	cpimedB365
MELO3C034202.2	Cucumber (Chinese Long) v2	cumedB360
MELO3C034202.2	Bottle gourd (USVL1VR-Ls)	lsimedB088
MELO3C034202.2	Watermelon (Charleston Gray)	medwcgB044
MELO3C034202.2	Watermelon (97103) v1	medwmB077
MELO3C034202.2	Silver-seed gourd	carmedB0669
MELO3C034202.2	Cucumber (Chinese Long) v3	cucmedB363
MELO3C034202.2	Watermelon (97103) v2	medwmbB044