MELO3C033924.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C033924.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionMyosin heavy chain-related protein, putative isoform 1
Locationchr09 : 15009912 .. 15010805 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATCGACAGTCGATTTTGATTTGAAAATGGGATCAGATATAACCAGTCAAATTGCCCAAGTGAAGTAATGGTTGGGATCCAAATTCGGCAGGTTCGATGAGAAATTCCTGATTTTGAATAAACCCCTTTTAGCATCTCTCGCTTTCCCAATCTCTACAATCTCTCCCAAACAAAGACACACGGCACTGAGATTTTGGCCAAATACTTCCACTTCAAGTTTGTCGAGTACCGTGCCCAAGGTAAAAAGATATCTCTTAGCTTTCGATTTGTTGAAATTTGTAATGGTATTTTGTTTTTTGGATATTGACTTGTATACTATTCAATAAAAGTCTAGTGTGTTTTCATCTCAAGAACCAGATTTCTTTTCTTTTCTTGAGATCTGAAGCAAAACTGAAAGAATTTTTAAATCATGAAGCAAGAAACAGAGATCAAAGTTGTATTCAAATTACAGTTTCAGGCAACACAAGTAATGTGATTTTGAAAGCCATAGTAATTAGCTACATTTTTTCTTTACTCATGAAGAAATGTTGGAAGCTACTATTTAAGATGAAACTTGTTTTTGGAAGAATTCTATTTATGAAACAATCAAGCTTGTTAGGGAAATAAAAATAGAAAAGATCAATGAGAAAATTTACCATTTTGTGTTGCAACTGTATGGCACATGGACACAAACTTCCAAAATTTTCCTGTTCGTAACTAGGCATCTAATGGAGCAACTTGAAAATTGTCATTGTTTTTGTAGGTAAGGATCATCAAAAGTTTGCTTTATTAACGAAGCTTCAATTCATTTTGTAGATTTTGAAGCAGAAACTGAACTCATGACAACTTTCGTTCATCTTAAGTTTGCAAACTCTGGTGCCATATTATATGTTGGTTCACTTTATTTCTAA

mRNA sequence

ATGTCATCGACAGTCGATTTTGATTTGAAAATGGGATCAGATATAACCAGTCAAATTGCCCAAGTGAACATCTCTCGCTTTCCCAATCTCTACAATCTCTCCCAAACAAAGACACACGGCACTGAGATTTTGGCCAAATACTTCCACTTCAAGTTTGTCGAGTACCGTGCCCAAGTGTGTTTTCATCTCAAGAACCAGATTTCTTTTCTTTTCTTGAGATCTGAAGCAAAACTGAAAGAATTTTTAAATCATGAAGCAAGAAACAGAGATCAAAGTTGTATTCAAATTACAGTTTCAGGCAACACAAGATCATCAAAAGTTTGCTTTATTAACGAAGCTTCAATTCATTTTGTAGATTTTGAAGCAGAAACTGAACTCATGACAACTTTCGTTCATCTTAAGTTTGCAAACTCTGGTGCCATATTATATGTTGGTTCACTTTATTTCTAA

Coding sequence (CDS)

ATGTCATCGACAGTCGATTTTGATTTGAAAATGGGATCAGATATAACCAGTCAAATTGCCCAAGTGAACATCTCTCGCTTTCCCAATCTCTACAATCTCTCCCAAACAAAGACACACGGCACTGAGATTTTGGCCAAATACTTCCACTTCAAGTTTGTCGAGTACCGTGCCCAAGTGTGTTTTCATCTCAAGAACCAGATTTCTTTTCTTTTCTTGAGATCTGAAGCAAAACTGAAAGAATTTTTAAATCATGAAGCAAGAAACAGAGATCAAAGTTGTATTCAAATTACAGTTTCAGGCAACACAAGATCATCAAAAGTTTGCTTTATTAACGAAGCTTCAATTCATTTTGTAGATTTTGAAGCAGAAACTGAACTCATGACAACTTTCGTTCATCTTAAGTTTGCAAACTCTGGTGCCATATTATATGTTGGTTCACTTTATTTCTAA

Protein sequence

MSSTVDFDLKMGSDITSQIAQVNISRFPNLYNLSQTKTHGTEILAKYFHFKFVEYRAQVCFHLKNQISFLFLRSEAKLKEFLNHEARNRDQSCIQITVSGNTRSSKVCFINEASIHFVDFEAETELMTTFVHLKFANSGAILYVGSLYF
Homology
[Close]
BLAST of MELO3C033924.2 vs. NCBI nr
Match: XP_022159186.1 (myosin-11 isoform X1 [Momordica charantia])

HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04
Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 101 NTRSSKVCFINEASIHFVDFEAETELMTTFVHLKFANSGAILYV 145
           +T SSK  F+ EASI F DFEAETE MT  + LKFANSGAIL+V
Sbjct: 89  STGSSKSGFVGEASIDFADFEAETEPMTVSLPLKFANSGAILHV 132

[Close]
BLAST of MELO3C033924.2 vs. NCBI nr
Match: XP_022159191.1 (myosin-11 isoform X2 [Momordica charantia])

HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04
Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 101 NTRSSKVCFINEASIHFVDFEAETELMTTFVHLKFANSGAILYV 145
           +T SSK  F+ EASI F DFEAETE MT  + LKFANSGAIL+V
Sbjct: 89  STGSSKSGFVGEASIDFADFEAETEPMTVSLPLKFANSGAILHV 132

[Close]
BLAST of MELO3C033924.2 vs. NCBI nr
Match: XP_022636635.1 (uncharacterized protein PFB0145c [Vigna radiata var. radiata])

HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04
Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = 0 

Query: 101 NTRSSKVCFINEASIHFVDFEAETELMTTFVHLKFANSGAILYVGSLY 149
           +T SSK  F+ E+SI F DF AETE +T  + LKFANSGAIL+VG+ Y
Sbjct: 89  STGSSKSGFLGESSIDFADFAAETEPLTVSLPLKFANSGAILHVGTFY 136

[Close]
BLAST of MELO3C033924.2 vs. NCBI nr
Match: XP_022952238.1 (interaptin isoform X1 [Cucurbita moschata])

HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04
Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 101 NTRSSKVCFINEASIHFVDFEAETELMTTFVHLKFANSGAILYV 145
           +T SSK  F+ EASI F DFEAETE MT  + LKFANSGAIL+V
Sbjct: 89  STGSSKSGFVGEASIDFADFEAETEPMTVSLPLKFANSGAILHV 132

[Close]
BLAST of MELO3C033924.2 vs. NCBI nr
Match: XP_022952239.1 (myosin-8 isoform X2 [Cucurbita moschata])

HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04
Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 101 NTRSSKVCFINEASIHFVDFEAETELMTTFVHLKFANSGAILYV 145
           +T SSK  F+ EASI F DFEAETE MT  + LKFANSGAIL+V
Sbjct: 89  STGSSKSGFVGEASIDFADFEAETEPMTVSLPLKFANSGAILHV 132

[Close]
BLAST of MELO3C033924.2 vs. TAIR10
Match: AT5G52280.1 (Myosin heavy chain-related protein)

HSP 1 Score: 44.7 bits (104), Expect = 5.9e-05
Identity = 24/43 (55.81%), Postives = 29/43 (67.44%), Query Frame = 0 

Query: 102 TRSSKVCFINEASIHFVDFEAETELMTTFVHLKFANSGAILYV 145
           T SSK  F+ EASI F DF  E + +T  + LKFANSGA+L V
Sbjct: 91  TGSSKSGFLGEASIDFADFLTEADPLTVSLPLKFANSGAVLNV 133

[Close]
BLAST of MELO3C033924.2 vs. TrEMBL
Match: tr|A0A1S3CQ89|A0A1S3CQ89_CUCME (myosin-11 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503463 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.4e-05
Identity = 30/43 (69.77%), Postives = 33/43 (76.74%), Query Frame = 0 

Query: 102 TRSSKVCFINEASIHFVDFEAETELMTTFVHLKFANSGAILYV 145
           T SSK  F+ EASI F DFEAETE MT  + LKFANSGAIL+V
Sbjct: 90  TGSSKSGFVGEASIDFADFEAETEPMTVSLPLKFANSGAILHV 132

[Close]
BLAST of MELO3C033924.2 vs. TrEMBL
Match: tr|A0A1S3CRB4|A0A1S3CRB4_CUCME (myosin-J heavy chain isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503463 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.4e-05
Identity = 30/43 (69.77%), Postives = 33/43 (76.74%), Query Frame = 0 

Query: 102 TRSSKVCFINEASIHFVDFEAETELMTTFVHLKFANSGAILYV 145
           T SSK  F+ EASI F DFEAETE MT  + LKFANSGAIL+V
Sbjct: 90  TGSSKSGFVGEASIDFADFEAETEPMTVSLPLKFANSGAILHV 132

[Close]
BLAST of MELO3C033924.2 vs. TrEMBL
Match: tr|A0A0A0LEL2|A0A0A0LEL2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G914010 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.4e-05
Identity = 30/43 (69.77%), Postives = 33/43 (76.74%), Query Frame = 0 

Query: 102 TRSSKVCFINEASIHFVDFEAETELMTTFVHLKFANSGAILYV 145
           T SSK  F+ EASI F DFEAETE MT  + LKFANSGAIL+V
Sbjct: 90  TGSSKSGFVGEASIDFADFEAETEPMTVSLPLKFANSGAILHV 132

[Close]
BLAST of MELO3C033924.2 vs. TrEMBL
Match: tr|A0A0B0PKE2|A0A0B0PKE2_GOSAR (Laminin subunit alpha-1 OS=Gossypium arboreum OX=29729 GN=F383_02552 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.2e-04
Identity = 31/56 (55.36%), Postives = 37/56 (66.07%), Query Frame = 0 

Query: 89  RDQSCIQITVSGNTRSSKVCFINEASIHFVDFEAETELMTTFVHLKFANSGAILYV 145
           +D SC+       T SSK  F+ EASI F DF AETE +T  + LKFANSGAIL+V
Sbjct: 55  QDGSCLWENPVYETGSSKAGFLGEASIDFADFAAETEPVTVSLPLKFANSGAILHV 110

[Close]
BLAST of MELO3C033924.2 vs. TrEMBL
Match: tr|A0A1S3C262|A0A1S3C262_CUCME (AUGMIN subunit 1 OS=Cucumis melo OX=3656 GN=LOC103495806 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.6e-04
Identity = 36/81 (44.44%), Postives = 40/81 (49.38%), Query Frame = 0 

Query: 1  MSSTVDFDLKMGSDITSQIAQV-----------------------NISRFPNLYNLSQTK 59
          MS  VD D KMGSD TS+IA+V                       ++S   NL NLSQ K
Sbjct: 5  MSPAVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNLSQAK 64

The following BLAST results are available for this feature:
BLAST of MELO3C033924.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022159186.11.1e-0468.18myosin-11 isoform X1 [Momordica charantia][more]
XP_022159191.11.1e-0468.18myosin-11 isoform X2 [Momordica charantia][more]
XP_022636635.11.1e-0460.42uncharacterized protein PFB0145c [Vigna radiata var. radiata][more]
XP_022952238.11.1e-0468.18interaptin isoform X1 [Cucurbita moschata][more]
XP_022952239.11.1e-0468.18myosin-8 isoform X2 [Cucurbita moschata][more]
BLAST of MELO3C033924.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G52280.15.9e-0555.81Myosin heavy chain-related protein[more]
BLAST of MELO3C033924.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C033924.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CQ89|A0A1S3CQ89_CUCME9.4e-0569.77myosin-11 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503463 PE=4 SV=1[more]
tr|A0A1S3CRB4|A0A1S3CRB4_CUCME9.4e-0569.77myosin-J heavy chain isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503463 PE=4 SV=... [more]
tr|A0A0A0LEL2|A0A0A0LEL2_CUCSA9.4e-0569.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G914010 PE=4 SV=1[more]
tr|A0A0B0PKE2|A0A0B0PKE2_GOSAR1.2e-0455.36Laminin subunit alpha-1 OS=Gossypium arboreum OX=29729 GN=F383_02552 PE=4 SV=1[more]
tr|A0A1S3C262|A0A1S3C262_CUCME4.6e-0444.44AUGMIN subunit 1 OS=Cucumis melo OX=3656 GN=LOC103495806 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033924.2.1MELO3C033924.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C033924.2Cucumber (Gy14) v2cgybmedB295
MELO3C033924.2Cucumber (Gy14) v2cgybmedB304
MELO3C033924.2Cucurbita maxima (Rimu)cmamedB286
MELO3C033924.2Cucurbita maxima (Rimu)cmamedB721
MELO3C033924.2Cucurbita moschata (Rifu)cmomedB272
MELO3C033924.2Cucurbita moschata (Rifu)cmomedB714
MELO3C033924.2Cucurbita pepo (Zucchini)cpemedB184
MELO3C033924.2Cucurbita pepo (Zucchini)cpemedB419
MELO3C033924.2Wild cucumber (PI 183967)cpimedB346
MELO3C033924.2Cucumber (Chinese Long) v2cumedB332
MELO3C033924.2Bottle gourd (USVL1VR-Ls)lsimedB014
MELO3C033924.2Watermelon (Charleston Gray)medwcgB018
MELO3C033924.2Watermelon (97103) v1medwmB031
MELO3C033924.2Silver-seed gourdcarmedB0537
MELO3C033924.2Silver-seed gourdcarmedB0832
MELO3C033924.2Cucumber (Chinese Long) v3cucmedB344
MELO3C033924.2Watermelon (97103) v2medwmbB008
MELO3C033924.2Wax gourdmedwgoB015