MELO3C033398.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C033398.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionMyb/SANT-like DNA-binding domain protein
Locationchr08 : 25520381 .. 25522049 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGCCGCACGTAAACAATTCGTACGCTACCACTTGCAAGAATGGTGTGGCCTTGAAAATGCACCTTCAACGTTGAAAGAGTTCTTCAATATGAAGCATTCGTCTGCTCGTAATGTAATCGAAAGAGCATTCAGTGTCTTGAAGGGTCGATGGGCGATACTGTGGGGAAAGTCATACTACCCTATAGAAGTTCAATGTCGCACAATACTCGCATGTTATCTCCTCCACAACCTTATCAATAGAGAGATGACAAACTTTGATATAGAAGACAACATAGATGAGGTTGATTCCATCCACGCGACTACTGCCACCGATGACATACATTACATAGAGACGTCCAATGAGTGGAGTCAATGGAGGGACGACCTTGCAGAAGAAATGTTTACTGATTGGGAGTTGCGTAACCAATAGAAAAATTAAATGTTCCCTGTTCATTTTCATACTTAAGTAGTGATTGCACTGGGTCTTATTTTGTCATAGTTTTTGGAATATGATTATTTTGAATGTATTGGTTACGCAAGTAAATTACTGCCAAACTGTTTTTCAGTAGGAGTTGATTGTACTATGAAACTAATCGTATGTATGTTATCTAATCATAGAGAAATTAATGAAACTAATATGTTTGCGTTTGACTTCTAGCACGACAAGTTCATCGAGACTACCTAAACACAGTTGGACTAAAGAGGAAGAGGCAGACCTCGTGGAGTGCCTCGTGGAGTTGGTTAATGCTAGTGGGTGGAGGTCCGACAACGGGACCTTTCTCCCCGGGTACTTAAATCAGTTGGCGAGAATGATGGCCTTCAAGATCCCAGGTTGTAATATCCATGCTTCAACCAACAATAGCCGAATCAAATTGATGAAGAGAATGTTCCATGCACTTGCGGAGATGCGTGGCCCAATGTGTAGTGGTTTTGGGTGGAATGATGAAAAAATGCATCGTCGCAGAGAAAGAAGTCTTTGTTGGGTCAAGGTGTGTTACTAGTCATTTGAACACTTACTGTACTATATTTCAATAAATGGACTAACAATTTATTATTGCACTTATACAGAGTCATCCAGCAGTAAAAGGCCTCCTTAATAAGTTGTTTGTCCACTATGACGAATTGTCGTACGTGTTTGGCAAAGATCGTGCAACAGGAGGTCGGGCCGAGAGTTTTGCGGACATTGGATCAAACGATCCTGCTGGGTATGACGCATTTGCCGCTGACGCTGTGCCAGATACAGACTTCCTGCCAATGTACAGTCAGGGATTGAACATGTCGCCTGATGATTTGATGGGAATAAGAATCGCTCGGGTCAGTGAACGTAGGAATGTTTCAAGCGGGTCTAAGCGAAAACGTGCACGACATGCCACAGATAGTGGGGACATAGTTCGTACTGCCATTGAGTACGGAAATGAACAATTGAATCGCATTGCTGAATGACCTGTCCTACAACGTCAAGACGCAAGCCAAACACGTCAAGAAGTTTTTCGACAGTTGGAGGTCATCCCTGAGCTGACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATGACATGAAAGCTTTCCTTGAAGTTCTCGATAAGTACCCGTACTGCAGCATCATTCTTCAAGAAAACCAATGACTAGTTTGTTTGTTGTATTTGTATTAATGAAACTTTTCTTACTTCGAC

mRNA sequence

TTGCCGCACGTAAACAATTCGTACGCTACCACTTGCAAGAATGGTGTGGCCTTGAAAATGCACCTTCAACGTTGAAAGAGTTCTTCAATATGAAGCATTCGTCTGCTCGTAATGTAATCGAAAGAGCATTCAGTGTCTTGAAGGGTCGATGGGCGATACTGTGGGGAAAGTCATACTACCCTATAGAAGTTCAATGTCGCACAATACTCGCATGTTATCTCCTCCACAACCTTATCAATAGAGAGATGACAAACTTTGATATAGAAGACAACATAGATGAGGTTGATTCCATCCACGCGACTACTGCCACCGATGACATACATTACATAGAGACGTCCAATGAGTGGAGTCAATGGAGGGACGACCTTGCAGAAGAAATCACGACAAGTTCATCGAGACTACCTAAACACAGTTGGACTAAAGAGGAAGAGGCAGACCTCGTGGAGTGCCTCGTGGAGTTGGTTAATGCTAGTGGGTGGAGGTCCGACAACGGGACCTTTCTCCCCGGGTACTTAAATCAGTTGGCGAGAATGATGGCCTTCAAGATCCCAGGTTGTAATATCCATGCTTCAACCAACAATAGCCGAATCAAATTGATGAAGAGAATGTTCCATGCACTTGCGGAGATGCGTGGCCCAATGTGTAGTGGTTTTGGGTGGAATGATGAAAAAATGCATCGTCGCAGAGAAAGAAGTCTTTGTTGGGTCAAGAGTCATCCAGCAGTAAAAGGCCTCCTTAATAAGTTGTTTGTCCACTATGACGAATTGTCGTACGTGTTTGGCAAAGATCGTGCAACAGGAGGTCGGGCCGAGAGTTTTGCGGACATTGGATCAAACGATCCTGCTGGGTATGACGCATTTGCCGCTGACGCTGTGCCAGATACAGACTTCCTGCCAATGTACAGTCAGGGATTGAACATGTCGCCTGATGATTTGATGGGAATAAGAATCGCTCGGGTCAGTGAACGTAGGAATGTTTCAAGCGGGTCTAAGCGAAAACGTGCACGACATGCCACAGATAGTGGGGACATAGTTCGTACTGCCATTGAGTACGGAAATGAACAATTGAATCGCATTGCTGAATGACCTGTCCTACAACGTCAAGACGCAAGCCAAACACGTCAAGAAGTTTTTCGACAGTTGGAGGTCATCCCTGAGCTGACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATGACATGAAAGCTTTCCTTGAAGTTCTCGATAAGTACCCGTACTGCAGCATCATTCTTCAAGAAAACCAATGACTAGTTTGTTTGTTGTATTTGTATTAATGAAACTTTTCTTACTTCGAC

Coding sequence (CDS)

ATGAAGCATTCGTCTGCTCGTAATGTAATCGAAAGAGCATTCAGTGTCTTGAAGGGTCGATGGGCGATACTGTGGGGAAAGTCATACTACCCTATAGAAGTTCAATGTCGCACAATACTCGCATGTTATCTCCTCCACAACCTTATCAATAGAGAGATGACAAACTTTGATATAGAAGACAACATAGATGAGGTTGATTCCATCCACGCGACTACTGCCACCGATGACATACATTACATAGAGACGTCCAATGAGTGGAGTCAATGGAGGGACGACCTTGCAGAAGAAATCACGACAAGTTCATCGAGACTACCTAAACACAGTTGGACTAAAGAGGAAGAGGCAGACCTCGTGGAGTGCCTCGTGGAGTTGGTTAATGCTAGTGGGTGGAGGTCCGACAACGGGACCTTTCTCCCCGGGTACTTAAATCAGTTGGCGAGAATGATGGCCTTCAAGATCCCAGGTTGTAATATCCATGCTTCAACCAACAATAGCCGAATCAAATTGATGAAGAGAATGTTCCATGCACTTGCGGAGATGCGTGGCCCAATGTGTAGTGGTTTTGGGTGGAATGATGAAAAAATGCATCGTCGCAGAGAAAGAAGTCTTTGTTGGGTCAAGAGTCATCCAGCAGTAAAAGGCCTCCTTAATAAGTTGTTTGTCCACTATGACGAATTGTCGTACGTGTTTGGCAAAGATCGTGCAACAGGAGGTCGGGCCGAGAGTTTTGCGGACATTGGATCAAACGATCCTGCTGGGTATGACGCATTTGCCGCTGACGCTGTGCCAGATACAGACTTCCTGCCAATGTACAGTCAGGGATTGAACATGTCGCCTGATGATTTGATGGGAATAAGAATCGCTCGGGTCAGTGAACGTAGGAATGTTTCAAGCGGGTCTAAGCGAAAACGTGCACGACATGCCACAGATAGTGGGGACATAGTTCGTACTGCCATTGAGTACGGAAATGAACAATTGAATCGCATTGCTGAATGA

Protein sequence

MKHSSARNVIERAFSVLKGRWAILWGKSYYPIEVQCRTILACYLLHNLINREMTNFDIEDNIDEVDSIHATTATDDIHYIETSNEWSQWRDDLAEEITTSSSRLPKHSWTKEEEADLVECLVELVNASGWRSDNGTFLPGYLNQLARMMAFKIPGCNIHASTNNSRIKLMKRMFHALAEMRGPMCSGFGWNDEKMHRRRERSLCWVKSHPAVKGLLNKLFVHYDELSYVFGKDRATGGRAESFADIGSNDPAGYDAFAADAVPDTDFLPMYSQGLNMSPDDLMGIRIARVSERRNVSSGSKRKRARHATDSGDIVRTAIEYGNEQLNRIAE
Homology
[Close]
BLAST of MELO3C033398.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 575.9 bits (1483), Expect = 9.0e-161
Identity = 289/331 (87.31%), Postives = 297/331 (89.73%), Query Frame = 0 

Query: 1   MKHSSARNVIERAFSVLKGRWAILWGKSYYPIEVQCRTILACYLLHNLINREMTNFDIED 60
           MKH SARNVIERAF VLKGRWAIL GKSYYP+EVQCRTILAC LLHNLINREMTNFDIED
Sbjct: 259 MKHYSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIED 318

Query: 61  NIDEVDSIHATTATDDIHYIETSNEWSQWRDDLAEEITTSSSRLPKHSWTKEEEADLVEC 120
           NIDEVDS HATTA DDIHYIETSNEWSQWRD+LAEEI TSSSRLPKH+WTKEEEA LVEC
Sbjct: 319 NIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEIMTSSSRLPKHTWTKEEEAGLVEC 378

Query: 121 LVELVNASGWRSDNGTFLPGYLNQLARMMAFKIPGCNIHASTNNSRIKLMKRMFHALAEM 180
           LVELVNA GWRSDNGTF PGYLNQLARMMAFKIPG NIHAST +SRIKLMKRMFHALAEM
Sbjct: 379 LVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHASTIDSRIKLMKRMFHALAEM 438

Query: 181 RGPMCSGFGWNDEKMHRRRERSLCWVKSHPAVKGLLNKLFVHYDELSYVFGKDRATGGRA 240
           RGP CSGFGWNDEK     E+ +    SHPA KGLLNK FVHYDELSYVFGKDRATGGRA
Sbjct: 439 RGPNCSGFGWNDEKKCIVAEKEVFDDWSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRA 498

Query: 241 ESFADIGSNDPAGYDAFAADAVPDTDFLPMYSQGLNMSPDDLMGIRIARVSERRNVSSGS 300
           ESFADIGSNDP GYDA AADA+PDTDF PMYS GLNMSPDDLM  R ARVSERRNVSSGS
Sbjct: 499 ESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGS 558

Query: 301 KRKRARHATDSGDIVRTAIEYGNEQLNRIAE 332
           KRKR  HATDSGDIVRTAIEYGNEQL+RIAE
Sbjct: 559 KRKRPGHATDSGDIVRTAIEYGNEQLHRIAE 589

[Close]
BLAST of MELO3C033398.2 vs. NCBI nr
Match: XP_008459131.1 (PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo])

HSP 1 Score: 370.9 bits (951), Expect = 4.4e-99
Identity = 190/233 (81.55%), Postives = 198/233 (84.98%), Query Frame = 0 

Query: 99  TSSSRLPKHSWTKEEEADLVECLVELVNASGWRSDNGTFLPGYLNQLARMMAFKIPGCNI 158
           TSSSRLPKH+WTKEEEA     LVELVNA GWRSDNGTF PGYLNQLARMMAFKIPGCNI
Sbjct: 2   TSSSRLPKHTWTKEEEAS----LVELVNAGGWRSDNGTFHPGYLNQLARMMAFKIPGCNI 61

Query: 159 HASTNNSRIKLMKRMFHALAEMRGPMCSGFGWNDEKMHRRRERSLCWVKSHPAVKGLLNK 218
           HAST +SRIKL+KRMFHALAEMRGP CSGFGWNDEK     E+     +SHPA KGLLNK
Sbjct: 62  HASTIDSRIKLLKRMFHALAEMRGPNCSGFGWNDEKKCIVAEK-----ESHPAAKGLLNK 121

Query: 219 LFVHYDELSYVFGKDRATGGRAESFADIGSNDPAGYDAFAADAVPDTDFLPMYSQGLNMS 278
            FVHYDELSYVFGKDRATGGRAE FADIGSNDPAGYDAF ADA PDT+F PMYS  LNMS
Sbjct: 122 SFVHYDELSYVFGKDRATGGRAEIFADIGSNDPAGYDAFVADAAPDTNFSPMYSPRLNMS 181

Query: 279 PDDLMGIRIARVSERRNVSSGSKRKRARHATDSGDIVRTAIEYGNEQLNRIAE 332
           PDDLM  R ARVSERRNVSSGS+RK   HATDSGDIV TAI YGNEQL+RIAE
Sbjct: 182 PDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRIAE 225

[Close]
BLAST of MELO3C033398.2 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 327.0 bits (837), Expect = 7.3e-86
Identity = 183/336 (54.46%), Postives = 225/336 (66.96%), Query Frame = 0 

Query: 1   MKHSSARNVIERAFSVLKGRWAILWGKSYYPIEVQCRTILACYLLHNLINREMTNFDIED 60
           MKHSSARNVIERAF VLKGRW IL GKSYYP++VQCRTILAC LLHNLINREMT  +  +
Sbjct: 231 MKHSSARNVIERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLLHNLINREMTYCNDVE 290

Query: 61  NIDEVDSIHA-TTATDDIHYIETSNEWSQWRDDLAEEITTSSSRLPKHSWTKEEEADLVE 120
           + DE DS +A TTA++DI YIET+NEWSQWRDDLA  + T         W +    D   
Sbjct: 291 DEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLATSMFT--------DW-QFRGGD--S 350

Query: 121 CLVELVNASGWRSDNGTFLPGYLNQLARMMAFKIPGCNIHAST-NNSRIKLMKRMFHALA 180
           C +ELV+  GW+SDNGTF PGYL QL RMMA K+ GC + A+T  + RIK +KR F A+A
Sbjct: 351 CGMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKRTFQAIA 410

Query: 181 EMRGPMCSGFGWNDEKMHRRRERSLC--WVKSHPAVKGLLNKLFVHYDELSYVFGKDRAT 240
           EM GP CSGFGWNDE+     E+ L   WV+S PA KGLLN  F +YDEL+YVFG+DRAT
Sbjct: 411 EMLGPACSGFGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYYDELTYVFGRDRAT 470

Query: 241 GGRAESFADIGSNDP-AGYDAFAADAVPDTDFLPMYSQGLNMSPDDLMGIRIARVSERRN 300
           G  AE+FAD+GSN+P  GYD F      + DF P+YS+G+++  DD+   R +       
Sbjct: 471 GRFAETFADVGSNEPGGGYDRFDM-GDGNEDFPPVYSRGVDILQDDVRASRPSXXXXXXX 530

Query: 301 VSSGSKRKRARHATDSGDIVRTAIEYGNEQLNRIAE 332
                 RKR        + +  A++  NEQL +IAE
Sbjct: 531 XXXXXXRKRGSQRDFDVEAIHLALDQTNEQLRQIAE 554

[Close]
BLAST of MELO3C033398.2 vs. NCBI nr
Match: XP_008466949.1 (PREDICTED: uncharacterized protein LOC103504332, partial [Cucumis melo])

HSP 1 Score: 311.2 bits (796), Expect = 4.2e-81
Identity = 156/190 (82.11%), Postives = 161/190 (84.74%), Query Frame = 0 

Query: 99  TSSSRLPKHSWTKEEEADLVECLVELVNASGWRSDNGTFLPGYLNQLARMMAFKIPGCNI 158
           TSSSRLPKH+WTKEEEA     LVELVN  GWRSDNGTF PGYLNQLARMMAFKIPG NI
Sbjct: 2   TSSSRLPKHTWTKEEEAG----LVELVNVGGWRSDNGTFRPGYLNQLARMMAFKIPGSNI 61

Query: 159 HASTNNSRIKLMKRMFHALAEMRGPMCSGFGWNDEKMHRRRERSLC--WVKSHPAVKGLL 218
           HAST +SRIKLMKRMFHALAEMRGP CSGFGWNDEK     E+ +   WVKSHP  KGLL
Sbjct: 62  HASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWVKSHPTAKGLL 121

Query: 219 NKLFVHYDELSYVFGKDRATGGRAESFADIGSNDPAGYDAFAADAVPDTDFLPMYSQGLN 278
           NK FVHYDELSYVFGKDRATGGRAESFADIGSNDP GYDAFAADA+PDTDF PMYS  LN
Sbjct: 122 NKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAMPDTDFPPMYSLRLN 181

Query: 279 MSPDDLMGIR 287
           MSPDDLM  R
Sbjct: 182 MSPDDLMETR 187

[Close]
BLAST of MELO3C033398.2 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo])

HSP 1 Score: 268.9 bits (686), Expect = 2.4e-68
Identity = 136/240 (56.67%), Postives = 173/240 (72.08%), Query Frame = 0 

Query: 100 SSSRLPKHSWTKEEEADLVECLVELVNASGWRSDNGTFLPGYLNQLARMMAFKIPGCNI- 159
           S SR PKH+WTKEEE   VECLVELV++ GWRSDNGTF PGYL QL RMMA K+PG NI 
Sbjct: 3   SLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQ 62

Query: 160 HASTNNSRIKLMKRMFHALAEMRGPMCSGFGWNDEKMHRRRERSL--CWVKSHPAVKGLL 219
            +ST +  +K +K+ +HA+AEMRGP CSGFGWN+E      ER L   W+KSHPA KGLL
Sbjct: 63  ESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLL 122

Query: 220 NKLFVHYDELSYVFGKDRATGGRAESFADIGSNDPAGYDAFAADAVP-----DTDFLPMY 279
           +K F +YD+LSYVFGKDRATG R+E+F ++GSN    ++    D +P     D D   MY
Sbjct: 123 HKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFN----DTIPLGDSHDEDIPTMY 182

Query: 280 SQGLNMSPDDLMGIRIARVSERRNVSSGSKRKRARHATDSGDIVRTAIEYGNEQLNRIAE 332
           SQG++MSPD++ GIR  + SERRN SS SKRKR     ++ +++R+ +E+GNEQL  IA+
Sbjct: 183 SQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIAD 238

[Close]
BLAST of MELO3C033398.2 vs. TAIR10
Match: AT1G30140.1 (unknown protein)

HSP 1 Score: 61.2 bits (147), Expect = 1.4e-09
Identity = 42/157 (26.75%), Postives = 76/157 (48.41%), Query Frame = 0 

Query: 93  LAEEITTSSSRLPKHSWTKEEEADLVECLVELVNASGWRSDNGTFLPGYLNQLARMMAF- 152
           + E+      + P + WT +E     + L+EL+    WR  +G  + G L   ++++   
Sbjct: 1   MMEDPPRGKEKGPYNQWTPDE----TDVLIELIR-QNWRDSSG--IIGKLTVESKLLPAL 60

Query: 153 -KIPGCNIHASTNNSRIKLMKRMFHALAEMRGPMCSGFGWNDE--KMHRRRERSLCWVKS 212
            K  GCN +     SR+K +K ++ +  +++    SGFGW+ E  K     E    ++K+
Sbjct: 61  NKRLGCNKNHKNYMSRLKFLKNLYQSYLDLK-RFSSGFGWDPETKKFTAPDEVWRDYLKA 120

Query: 213 HPAVKGLLNKLFVHYDELSYVFGKDRATGGRAESFAD 246
           HP  K +  +   H+++L  +FG   ATG  A   +D
Sbjct: 121 HPNHKHMQTESIDHFEDLQIIFGDVVATGSFAVGMSD 149

[Close]
BLAST of MELO3C033398.2 vs. TAIR10
Match: AT5G35695.1 (Putative harbinger transposase-derived nuclease (InterPro:IPR006912))

HSP 1 Score: 46.2 bits (108), Expect = 4.5e-05
Identity = 34/121 (28.10%), Postives = 54/121 (44.63%), Query Frame = 0 

Query: 1   MKHSSARNVIERAFSVLKGRWAILWGKSYYPIEVQCRTILACYLLHNLINREMTNFDIED 60
           ++H S RNVIER F + K R+AI      +  + Q   +L C  LHN + +E  + D  D
Sbjct: 92  LRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCAALHNFLRKECRS-DEAD 151

Query: 61  NIDEVDS----------IHATTATDDIHYIETSNE----WSQWRDDLAEEITTSSSRLPK 108
             DEV +             T   D+   +E   +     + WR  +AE++   ++ L  
Sbjct: 152 FPDEVGNEGDVXXXXXXXMNTNEIDNEEPLEAQKQDRENTNMWRKSMAEDMWKDATNLEI 211

[Close]
BLAST of MELO3C033398.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 6.0e-161
Identity = 289/331 (87.31%), Postives = 297/331 (89.73%), Query Frame = 0 

Query: 1   MKHSSARNVIERAFSVLKGRWAILWGKSYYPIEVQCRTILACYLLHNLINREMTNFDIED 60
           MKH SARNVIERAF VLKGRWAIL GKSYYP+EVQCRTILAC LLHNLINREMTNFDIED
Sbjct: 259 MKHYSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIED 318

Query: 61  NIDEVDSIHATTATDDIHYIETSNEWSQWRDDLAEEITTSSSRLPKHSWTKEEEADLVEC 120
           NIDEVDS HATTA DDIHYIETSNEWSQWRD+LAEEI TSSSRLPKH+WTKEEEA LVEC
Sbjct: 319 NIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEIMTSSSRLPKHTWTKEEEAGLVEC 378

Query: 121 LVELVNASGWRSDNGTFLPGYLNQLARMMAFKIPGCNIHASTNNSRIKLMKRMFHALAEM 180
           LVELVNA GWRSDNGTF PGYLNQLARMMAFKIPG NIHAST +SRIKLMKRMFHALAEM
Sbjct: 379 LVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHASTIDSRIKLMKRMFHALAEM 438

Query: 181 RGPMCSGFGWNDEKMHRRRERSLCWVKSHPAVKGLLNKLFVHYDELSYVFGKDRATGGRA 240
           RGP CSGFGWNDEK     E+ +    SHPA KGLLNK FVHYDELSYVFGKDRATGGRA
Sbjct: 439 RGPNCSGFGWNDEKKCIVAEKEVFDDWSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRA 498

Query: 241 ESFADIGSNDPAGYDAFAADAVPDTDFLPMYSQGLNMSPDDLMGIRIARVSERRNVSSGS 300
           ESFADIGSNDP GYDA AADA+PDTDF PMYS GLNMSPDDLM  R ARVSERRNVSSGS
Sbjct: 499 ESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGS 558

Query: 301 KRKRARHATDSGDIVRTAIEYGNEQLNRIAE 332
           KRKR  HATDSGDIVRTAIEYGNEQL+RIAE
Sbjct: 559 KRKRPGHATDSGDIVRTAIEYGNEQLHRIAE 589

[Close]
BLAST of MELO3C033398.2 vs. TrEMBL
Match: tr|A0A1S3C8Z4|A0A1S3C8Z4_CUCME (uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 2.9e-99
Identity = 190/233 (81.55%), Postives = 198/233 (84.98%), Query Frame = 0 

Query: 99  TSSSRLPKHSWTKEEEADLVECLVELVNASGWRSDNGTFLPGYLNQLARMMAFKIPGCNI 158
           TSSSRLPKH+WTKEEEA     LVELVNA GWRSDNGTF PGYLNQLARMMAFKIPGCNI
Sbjct: 2   TSSSRLPKHTWTKEEEAS----LVELVNAGGWRSDNGTFHPGYLNQLARMMAFKIPGCNI 61

Query: 159 HASTNNSRIKLMKRMFHALAEMRGPMCSGFGWNDEKMHRRRERSLCWVKSHPAVKGLLNK 218
           HAST +SRIKL+KRMFHALAEMRGP CSGFGWNDEK     E+     +SHPA KGLLNK
Sbjct: 62  HASTIDSRIKLLKRMFHALAEMRGPNCSGFGWNDEKKCIVAEK-----ESHPAAKGLLNK 121

Query: 219 LFVHYDELSYVFGKDRATGGRAESFADIGSNDPAGYDAFAADAVPDTDFLPMYSQGLNMS 278
            FVHYDELSYVFGKDRATGGRAE FADIGSNDPAGYDAF ADA PDT+F PMYS  LNMS
Sbjct: 122 SFVHYDELSYVFGKDRATGGRAEIFADIGSNDPAGYDAFVADAAPDTNFSPMYSPRLNMS 181

Query: 279 PDDLMGIRIARVSERRNVSSGSKRKRARHATDSGDIVRTAIEYGNEQLNRIAE 332
           PDDLM  R ARVSERRNVSSGS+RK   HATDSGDIV TAI YGNEQL+RIAE
Sbjct: 182 PDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRIAE 225

[Close]
BLAST of MELO3C033398.2 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 4.8e-86
Identity = 183/336 (54.46%), Postives = 225/336 (66.96%), Query Frame = 0 

Query: 1   MKHSSARNVIERAFSVLKGRWAILWGKSYYPIEVQCRTILACYLLHNLINREMTNFDIED 60
           MKHSSARNVIERAF VLKGRW IL GKSYYP++VQCRTILAC LLHNLINREMT  +  +
Sbjct: 231 MKHSSARNVIERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLLHNLINREMTYCNDVE 290

Query: 61  NIDEVDSIHA-TTATDDIHYIETSNEWSQWRDDLAEEITTSSSRLPKHSWTKEEEADLVE 120
           + DE DS +A TTA++DI YIET+NEWSQWRDDLA  + T         W +    D   
Sbjct: 291 DEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLATSMFT--------DW-QFRGGD--S 350

Query: 121 CLVELVNASGWRSDNGTFLPGYLNQLARMMAFKIPGCNIHAST-NNSRIKLMKRMFHALA 180
           C +ELV+  GW+SDNGTF PGYL QL RMMA K+ GC + A+T  + RIK +KR F A+A
Sbjct: 351 CGMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKRTFQAIA 410

Query: 181 EMRGPMCSGFGWNDEKMHRRRERSLC--WVKSHPAVKGLLNKLFVHYDELSYVFGKDRAT 240
           EM GP CSGFGWNDE+     E+ L   WV+S PA KGLLN  F +YDEL+YVFG+DRAT
Sbjct: 411 EMLGPACSGFGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYYDELTYVFGRDRAT 470

Query: 241 GGRAESFADIGSNDP-AGYDAFAADAVPDTDFLPMYSQGLNMSPDDLMGIRIARVSERRN 300
           G  AE+FAD+GSN+P  GYD F      + DF P+YS+G+++  DD+   R +       
Sbjct: 471 GRFAETFADVGSNEPGGGYDRFDM-GDGNEDFPPVYSRGVDILQDDVRASRPSXXXXXXX 530

Query: 301 VSSGSKRKRARHATDSGDIVRTAIEYGNEQLNRIAE 332
                 RKR        + +  A++  NEQL +IAE
Sbjct: 531 XXXXXXRKRGSQRDFDVEAIHLALDQTNEQLRQIAE 554

[Close]
BLAST of MELO3C033398.2 vs. TrEMBL
Match: tr|A0A1S3CTN6|A0A1S3CTN6_CUCME (uncharacterized protein LOC103504332 OS=Cucumis melo OX=3656 GN=LOC103504332 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.7e-81
Identity = 156/190 (82.11%), Postives = 161/190 (84.74%), Query Frame = 0 

Query: 99  TSSSRLPKHSWTKEEEADLVECLVELVNASGWRSDNGTFLPGYLNQLARMMAFKIPGCNI 158
           TSSSRLPKH+WTKEEEA     LVELVN  GWRSDNGTF PGYLNQLARMMAFKIPG NI
Sbjct: 2   TSSSRLPKHTWTKEEEAG----LVELVNVGGWRSDNGTFRPGYLNQLARMMAFKIPGSNI 61

Query: 159 HASTNNSRIKLMKRMFHALAEMRGPMCSGFGWNDEKMHRRRERSLC--WVKSHPAVKGLL 218
           HAST +SRIKLMKRMFHALAEMRGP CSGFGWNDEK     E+ +   WVKSHP  KGLL
Sbjct: 62  HASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWVKSHPTAKGLL 121

Query: 219 NKLFVHYDELSYVFGKDRATGGRAESFADIGSNDPAGYDAFAADAVPDTDFLPMYSQGLN 278
           NK FVHYDELSYVFGKDRATGGRAESFADIGSNDP GYDAFAADA+PDTDF PMYS  LN
Sbjct: 122 NKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAMPDTDFPPMYSLRLN 181

Query: 279 MSPDDLMGIR 287
           MSPDDLM  R
Sbjct: 182 MSPDDLMETR 187

[Close]
BLAST of MELO3C033398.2 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.6e-68
Identity = 136/240 (56.67%), Postives = 173/240 (72.08%), Query Frame = 0 

Query: 100 SSSRLPKHSWTKEEEADLVECLVELVNASGWRSDNGTFLPGYLNQLARMMAFKIPGCNI- 159
           S SR PKH+WTKEEE   VECLVELV++ GWRSDNGTF PGYL QL RMMA K+PG NI 
Sbjct: 3   SLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQ 62

Query: 160 HASTNNSRIKLMKRMFHALAEMRGPMCSGFGWNDEKMHRRRERSL--CWVKSHPAVKGLL 219
            +ST +  +K +K+ +HA+AEMRGP CSGFGWN+E      ER L   W+KSHPA KGLL
Sbjct: 63  ESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLL 122

Query: 220 NKLFVHYDELSYVFGKDRATGGRAESFADIGSNDPAGYDAFAADAVP-----DTDFLPMY 279
           +K F +YD+LSYVFGKDRATG R+E+F ++GSN    ++    D +P     D D   MY
Sbjct: 123 HKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFN----DTIPLGDSHDEDIPTMY 182

Query: 280 SQGLNMSPDDLMGIRIARVSERRNVSSGSKRKRARHATDSGDIVRTAIEYGNEQLNRIAE 332
           SQG++MSPD++ GIR  + SERRN SS SKRKR     ++ +++R+ +E+GNEQL  IA+
Sbjct: 183 SQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIAD 238

The following BLAST results are available for this feature:
BLAST of MELO3C033398.2 vs. NCBI nr
Match NameE-valueIdentityDescription
ADN34114.19.0e-16187.31retrotransposon protein [Cucumis melo subsp. melo][more]
XP_008459131.14.4e-9981.55PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo][more]
ADN33754.17.3e-8654.46retrotransposon protein [Cucumis melo subsp. melo][more]
XP_008466949.14.2e-8182.11PREDICTED: uncharacterized protein LOC103504332, partial [Cucumis melo][more]
XP_008441954.12.4e-6856.67PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo][more]
BLAST of MELO3C033398.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G30140.11.4e-0926.75unknown protein[more]
AT5G35695.14.5e-0528.10Putative harbinger transposase-derived nuclease (InterPro:IPR006912)[more]
BLAST of MELO3C033398.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C033398.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|E5GCB5|E5GCB5_CUCME6.0e-16187.31Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S3C8Z4|A0A1S3C8Z4_CUCME2.9e-9981.55uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=... [more]
tr|E5GBB2|E5GBB2_CUCME4.8e-8654.46Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S3CTN6|A0A1S3CTN6_CUCME2.7e-8182.11uncharacterized protein LOC103504332 OS=Cucumis melo OX=3656 GN=LOC103504332 PE=... [more]
tr|A0A1S3B4L3|A0A1S3B4L3_CUCME1.6e-6856.67uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033398.2.1MELO3C033398.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31704:SF62SUBFAMILY NOT NAMEDcoord: 106..246
NoneNo IPR availablePANTHERPTHR31704FAMILY NOT NAMEDcoord: 106..246

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C033398.2Silver-seed gourdcarmedB0593
MELO3C033398.2Silver-seed gourdcarmedB1010
MELO3C033398.2Cucumber (Chinese Long) v3cucmedB321
MELO3C033398.2Watermelon (97103) v2medwmbB538
MELO3C033398.2Wax gourdmedwgoB659
MELO3C033398.2Cucumber (Gy14) v2cgybmedB280
MELO3C033398.2Cucumber (Gy14) v1cgymedB548
MELO3C033398.2Cucurbita maxima (Rimu)cmamedB693
MELO3C033398.2Cucurbita maxima (Rimu)cmamedB899
MELO3C033398.2Cucurbita moschata (Rifu)cmomedB685
MELO3C033398.2Cucurbita moschata (Rifu)cmomedB888
MELO3C033398.2Cucurbita pepo (Zucchini)cpemedB089
MELO3C033398.2Cucurbita pepo (Zucchini)cpemedB542
MELO3C033398.2Wild cucumber (PI 183967)cpimedB314
MELO3C033398.2Cucumber (Chinese Long) v2cumedB311
MELO3C033398.2Bottle gourd (USVL1VR-Ls)lsimedB164
MELO3C033398.2Watermelon (Charleston Gray)medwcgB529
MELO3C033398.2Watermelon (Charleston Gray)medwcgB532
MELO3C033398.2Watermelon (97103) v1medwmB575