MELO3C033394.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C033394.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr08 : 25311392 .. 25313231 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAAACTGAAGTGCTCACAAACCAAGAGATTTGGGACCGATCTTGCACAAAAACCTGTCGGAACATCGCTACCTTGTCGGAACATCGCTACCTTGTCGTAAGATTAGGGCAGTTTGCAGTTTGCAGGTGACGGTATTATGTTTTTTTAATATATATATATTTTTTTTCATATATTTATTTGGAAGAAAGTGAAGTTTCTTAGTAAGAATGGGTGACGGTATTATGTTTTTTTAACAACTTGTTTAATTTATGTGTCACAGTCATTTGTGTTAGCGTAACCACTTCTCAAATCAAGTTCTCCATTGCATCAAAGGCGATTGTTCTTAGTGAGGAGGTATTGTTCATCTTCTTAATATCACATAATGTACTGTAAGTGCTTTTCAAATATGATGAATTAGAATATATTTCTTGACCTCGATAATTTTAAAGTAATTTTAGATGTTTAATTATAAACACAACTTAACATATATCAAACATCAAGTTTTTTTTTTTTTTTTACGAACTCATTGATTCTGTTAAAAATATTTTTCTTTAGGTTTAGATGTAAGTTTGATCCTCGAAACTTCTTTAGTTCTTATATTATTTTGGTTTATGAAACCATAATCTTTAATTTATTAAATAATGAATAATATTTGTATGAGGTTTGAAGTATAGTTTAAGAACTTAAATCAGCTATATATTGACTTTATTTTCATATTTCTATTCGACAGATTCTTTTATATCTTCTTTGTGTTATTTGAATGAAATGATACTTGCGGAGTATATGATGAGGGTGTCAACTGATATATATCCACATTACGTATCTTTCTCAAAAGAAGAAAAATTAAACCTTTAAAGTTACTTTATGTTAAACCAGTTGATATATCAGATCAACATATTATTGATTAGTTTAGTGTTGTGTTGTAACTGGTTGATGTTTTTGTAGGGTCAACATTGTAAGATCGAAGGTTTTGGAGAAGTTGAAAGTCAATTCCGGATCAATCTTTGTCCTATGTTGTTTTTCCTGAATTTTACATATAAAGCAAGCAAGATTTGGTTTTATAAGACAAAGAATAATGCTTATACTGTAATGATGGTTCCAGCTTTTGGAATTTATGGTCAATATGCAATCTATTTTCCCACCTCATGACATACATTGTGGGAAAATATATAGGTTTACATTGAGATTGTTTGGTGGTCATTGTTCGACTGACATTGTTAATTTTTGCATTCGGATATCAATATGTATCCTTTGCAAACTGTTTGTGGATTTTTCTGTGAACTGTCATTAATATCTAGAAAGTTGAAACCTTGAGTTCATATTATACATTTGTAGAAGTAATACTTAGAATGTATTTTATCATGAAGTTTTAGGTTAAGTTATAACTTTTTTAAGGGGCGGGTCATATATGAGTAGGAGCATTCAAATATTTCAAATAGATTGACACTTTCTTAACACTCATATATTTAAATATCTTAAAAATTGTGGAAGTTTCGATTTGTATTTTAATAGAATTTGTATTTCAGTTTCTTCCATCCCTTTTTGAATATGTAATGTGTTTGTTTGTGTTTCTTTTGCTTTGGATCTATTTGTCGTCCGCATCCCTAACCTCTTTTTAATGGGAAAACTGAAGTGCTCACAAACCAAGAGATTTGGGACCGATTTTGCACAAAAACCTGTCGGAACATCGCTACCTTGTCGGAACATCGCTACCTTGTCGTAAGATTAGGGCAGTTTGCAGTTTGCAGGTAGTCTCTTCTTTTATATCAGTTTGCAGAAAATTATTAGGGCAGAGTTCTTTCTATTCCAGAAGTTCGTCGACATTGCAAACTGTAGGCTACATCTTCTTTGCGGCA

mRNA sequence

ATGGGAAAACTGAAGTGCTCACAAACCAAGAGATTTGGGACCGATCTTGCACAAAAACCTGTCGGAACATCGCTACCTTGTCGGAACATCGCTACCTTGTCCGTAACCACTTCTCAAATCAAGTTCTCCATTGCATCAAAGGCGATTGTTCTTAGTGAGGAGGGTCAACATTGTAAGATCGAAGGTTTTGGAGAAGTTGAAAGTCAATTCCGGATCAATCTTTGTCCTATGTTGTTTTTCCTGAATTTTACATATAAAGCAAGCAAGATTTGGTTTTATAAGACAAAGAATAATGCTTATACTGTAATGATGGTTCCAGCTTTTGGAATTTATGGTCAATATGCAATCTATTTTCCCACCTCATGACATACATTGTGGGAAAATATATAGGTTTACATTGAGATTGTTTGGTGGTCATTGTTCGACTGACATTGTTAATTTTTGCATTCGGATATCAATATGTATCCTTTGCAAACTGTTTGTGGATTTTTCTGTGAACTGTCATTAATATCTAGAAAGTTGAAACCTTGAGTTCATATTATACATTTGTAGAAGTAATACTTAGAATGTATTTTATCATGAAGTTTTAGGTTAAGTTATAACTTTTTTAAGGGGCGGGTCATATATGAGTAGGAGCATTCAAATATTTCAAATAGATTGACACTTTCTTAACACTCATATATTTAAATATCTTAAAAATTGTGGAAGTTTCGATTTGTATTTTAATAGAATTTGTATTTCAGTTTCTTCCATCCCTTTTTGAATATGTAATGTGTTTGTTTGTGTTTCTTTTGCTTTGGATCTATTTGTCGTCCGCATCCCTAACCTCTTTTTAATGGGAAAACTGAAGTGCTCACAAACCAAGAGATTTGGGACCGATTTTGCACAAAAACCTGTCGGAACATCGCTACCTTGTCGGAACATCGCTACCTTGTCGTAAGATTAGGGCAGTTTGCAGTTTGCAGGTAGTCTCTTCTTTTATATCAGTTTGCAGAAAATTATTAGGGCAGAGTTCTTTCTATTCCAGAAGTTCGTCGACATTGCAAACTGTAGGCTACATCTTCTTTGCGGCA

Coding sequence (CDS)

ATGGGAAAACTGAAGTGCTCACAAACCAAGAGATTTGGGACCGATCTTGCACAAAAACCTGTCGGAACATCGCTACCTTGTCGGAACATCGCTACCTTGTCCGTAACCACTTCTCAAATCAAGTTCTCCATTGCATCAAAGGCGATTGTTCTTAGTGAGGAGGGTCAACATTGTAAGATCGAAGGTTTTGGAGAAGTTGAAAGTCAATTCCGGATCAATCTTTGTCCTATGTTGTTTTTCCTGAATTTTACATATAAAGCAAGCAAGATTTGGTTTTATAAGACAAAGAATAATGCTTATACTGTAATGATGGTTCCAGCTTTTGGAATTTATGGTCAATATGCAATCTATTTTCCCACCTCATGA

Protein sequence

MGKLKCSQTKRFGTDLAQKPVGTSLPCRNIATLSVTTSQIKFSIASKAIVLSEEGQHCKIEGFGEVESQFRINLCPMLFFLNFTYKASKIWFYKTKNNAYTVMMVPAFGIYGQYAIYFPTS
Homology
[Close]
BLAST of MELO3C033394.2 vs. NCBI nr
Match: XP_008464344.1 (PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo])

HSP 1 Score: 137.9 bits (346), Expect = 2.3e-29
Identity = 65/92 (70.65%), Postives = 83/92 (90.22%), Query Frame = 0 

Query: 29  NIATLSVTTSQIKFSIASKAIVLSEEGQHCKIEGF-GEVESQFRINLCPMLFFLNFTYKA 88
           +I ++ VT S++KFSIASK I+L+ EG+HCKIEGF  EVE+QF+I LCPM+FFLNFTYKA
Sbjct: 162 SIISVDVTNSRVKFSIASKEIILT-EGRHCKIEGFEEEVETQFQIILCPMMFFLNFTYKA 221

Query: 89  SKIWFYKTKNNAYTVMMVPAFGIYGQYAIYFP 120
           +++WFYKTKNNAYT+M+VPA+GI+GQY IYFP
Sbjct: 222 NRVWFYKTKNNAYTLMVVPAYGIFGQYVIYFP 252

[Close]
BLAST of MELO3C033394.2 vs. NCBI nr
Match: XP_022155138.1 (uncharacterized protein LOC111022279 [Momordica charantia])

HSP 1 Score: 102.1 bits (253), Expect = 1.4e-18
Identity = 47/87 (54.02%), Postives = 66/87 (75.86%), Query Frame = 0 

Query: 34  SVTTSQIKFSIASKAIVLSEEGQHCKIEGF-GEVESQFRINLCPMLFFLNFTYKASKIWF 93
           ++T SQ++F IA + IVL++EG HC IEG+ G  E+QF+++L PMLFF+N +Y++ +IWF
Sbjct: 160 TLTDSQVRFYIADREIVLTKEGGHCVIEGYQGRFEAQFQVSLRPMLFFINLSYQSERIWF 219

Query: 94  YKTKNNAYTVMMVPAFGIYGQYAIYFP 120
            KT N+  TV+ VPAF  Y QY IYFP
Sbjct: 220 SKTTNSRSTVICVPAFAFYAQYVIYFP 246

[Close]
BLAST of MELO3C033394.2 vs. NCBI nr
Match: XP_023000630.1 (uncharacterized protein LOC111494874 [Cucurbita maxima])

HSP 1 Score: 89.7 bits (221), Expect = 7.2e-15
Identity = 42/88 (47.73%), Postives = 61/88 (69.32%), Query Frame = 0 

Query: 33  LSVTTSQIKFSIASKAIVLSEEGQHCKIEGF-GEVESQFRINLCPMLFFLNFTYKASKIW 92
           ++VT+S+++FSIAS+ ++  +E   C+I G  G+  ++FRI L PMLFFLN TY    +W
Sbjct: 162 VTVTSSRVRFSIASRELIFKKEKGRCEILGHDGDAVTEFRIVLYPMLFFLNLTYDVQTVW 221

Query: 93  FYKTKNNAYTVMMVPAFGIYGQYAIYFP 120
           F+KT  N + VM+ P F I+ QY IYFP
Sbjct: 222 FHKTITNTHDVMIFPVFEIFAQYVIYFP 249

[Close]
BLAST of MELO3C033394.2 vs. NCBI nr
Match: XP_023006010.1 (uncharacterized protein LOC111498887 [Cucurbita maxima])

HSP 1 Score: 84.0 bits (206), Expect = 3.9e-13
Identity = 51/116 (43.97%), Postives = 73/116 (62.93%), Query Frame = 0 

Query: 8   QTKRFGTDLAQ--KPVGTSLPC--RNIATLSVTTSQIKFSIASKAIVLSEEGQHCKIEGF 67
           Q  RF + ++Q  + + T LP    N   +S+T+S++KF  AS+  +L++EG  C I G+
Sbjct: 131 QHDRFFSIISQDFRDIITGLPSFPNNSIFVSLTSSRVKFCCASEERILTKEGGRCAIIGY 190

Query: 68  -GEVESQFRINLCPMLFFLNFTYKASKIWFYKTKNNAYTVMMVPAFGIYGQYAIYF 119
            GE E  F+INL P  FF N +Y A +IWFYKT ++   V+ VPAFG+  QY IYF
Sbjct: 191 EGEAEIVFQINLNPKWFFFNLSYGAYRIWFYKTIDSR-CVIFVPAFGLNAQYVIYF 245

[Close]
BLAST of MELO3C033394.2 vs. NCBI nr
Match: XP_023548334.1 (uncharacterized protein LOC111807002 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 82.4 bits (202), Expect = 1.1e-12
Identity = 49/116 (42.24%), Postives = 73/116 (62.93%), Query Frame = 0 

Query: 8   QTKRFGTDLAQ--KPVGTSLPC--RNIATLSVTTSQIKFSIASKAIVLSEEGQHCKIEGF 67
           Q  RF + ++Q  + + T LP    +   +S+T+SQ+KF  AS+  +L++EG  C I G+
Sbjct: 131 QHDRFFSIISQDFRDIVTGLPSFPNDSIFVSLTSSQVKFCCASEERILTKEGGRCVIVGY 190

Query: 68  -GEVESQFRINLCPMLFFLNFTYKASKIWFYKTKNNAYTVMMVPAFGIYGQYAIYF 119
            G+ E  F+INL P  FF N +Y A +IWFYKT ++   V+ +PAFG+  QY IYF
Sbjct: 191 EGQAEIVFQINLNPKWFFFNLSYGAYRIWFYKTIDSR-CVIFIPAFGLNAQYVIYF 245

[Close]
BLAST of MELO3C033394.2 vs. TrEMBL
Match: tr|A0A1S3CL88|A0A1S3CL88_CUCME (uncharacterized protein LOC103502250 OS=Cucumis melo OX=3656 GN=LOC103502250 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-29
Identity = 65/92 (70.65%), Postives = 83/92 (90.22%), Query Frame = 0 

Query: 29  NIATLSVTTSQIKFSIASKAIVLSEEGQHCKIEGF-GEVESQFRINLCPMLFFLNFTYKA 88
           +I ++ VT S++KFSIASK I+L+ EG+HCKIEGF  EVE+QF+I LCPM+FFLNFTYKA
Sbjct: 162 SIISVDVTNSRVKFSIASKEIILT-EGRHCKIEGFEEEVETQFQIILCPMMFFLNFTYKA 221

Query: 89  SKIWFYKTKNNAYTVMMVPAFGIYGQYAIYFP 120
           +++WFYKTKNNAYT+M+VPA+GI+GQY IYFP
Sbjct: 222 NRVWFYKTKNNAYTLMVVPAYGIFGQYVIYFP 252

[Close]
BLAST of MELO3C033394.2 vs. TrEMBL
Match: tr|A0A1S3C8J1|A0A1S3C8J1_CUCME (uncharacterized protein LOC103498010 OS=Cucumis melo OX=3656 GN=LOC103498010 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.1e-10
Identity = 35/63 (55.56%), Postives = 52/63 (82.54%), Query Frame = 0 

Query: 28  RNIATLSVTTSQIKFSIASKAIVLSEEGQHCKIEGF-GEVESQFRINLCPMLFFLNFTYK 87
           ++  +++VT SQ+KFSI SK I+L++EG HCKI G+ GEVE++ ++ L PM+FFLNFTY+
Sbjct: 155 QDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKLQVVLRPMMFFLNFTYR 214

Query: 88  ASK 90
           A+K
Sbjct: 215 ANK 217

[Close]
BLAST of MELO3C033394.2 vs. TrEMBL
Match: tr|A0A0A0KCY3|A0A0A0KCY3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002350 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.1e-07
Identity = 33/90 (36.67%), Postives = 56/90 (62.22%), Query Frame = 0 

Query: 31  ATLSVTTSQIKFSIASKAIVLSEEGQHCKIEGFG-EVESQFRINLCPMLFFLNFTYKASK 90
           A +++T S++KFS+  K I L +E   C I G   E ES+F + L P + F +   K+ +
Sbjct: 72  ALVTLTNSEVKFSVNDKEISLYKEVDECIIGGVADEEESRFFVYLNPKILFRDLANKSER 131

Query: 91  IWFYKTKNNAYTVMMVPAFGIYGQYAIYFP 120
           IW +K+  N+Y++++ P  G+Y Q+ +YFP
Sbjct: 132 IWMFKSP-NSYSIIVAP-IGLYAQFCVYFP 159

[Close]
BLAST of MELO3C033394.2 vs. TrEMBL
Match: tr|A0A1S3C8E9|A0A1S3C8E9_CUCME (uncharacterized protein LOC103498005 OS=Cucumis melo OX=3656 GN=LOC103498005 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.5e-05
Identity = 32/91 (35.16%), Postives = 57/91 (62.64%), Query Frame = 0 

Query: 31  ATLSVTTSQIKFSIASKAIVLSEEGQHCKIEG--FGEVESQFRINLCPMLFFLNFTYKAS 90
           A +++T S++KFS+  K I+L +E   C I G   GE ES+F + L P + F +   +++
Sbjct: 161 ALVTLTNSEVKFSVNDKDIILYKERDECIIGGVEIGE-ESRFFVYLNPKVLFRDLAEQSA 220

Query: 91  KIWFYKTKNNAYTVMMVPAFGIYGQYAIYFP 120
           +IW +K+   +Y++ + P  G+Y Q+ +YFP
Sbjct: 221 RIWMFKSP-RSYSITVAP-IGLYAQFCVYFP 248

[Close]
BLAST of MELO3C033394.2 vs. TrEMBL
Match: tr|A0A0A0K7E0|A0A0A0K7E0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002300 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.6e-05
Identity = 29/95 (30.53%), Postives = 55/95 (57.89%), Query Frame = 0 

Query: 27  CRN-IATLSVTTSQIKFSIASKAIVLSEEGQHCKIEGFGEVE-SQFRINLCPMLFFLNFT 86
           CR+    ++ T S ++FS   K  + + EG  C +EG G+ + ++F I + P   F N T
Sbjct: 149 CRDYFVRVTTTHSHVRFSNEIKEFIFAREGGECIMEGVGKGKGTEFLIPIYPTHVFYNIT 208

Query: 87  YKASKIWFYKTKNNAYTVMMVPAFGIYGQYAIYFP 120
           ++A ++W +K+ +   T ++ P  G++ ++ IYFP
Sbjct: 209 FRAKRVWLFKSIDKLGTFIVAPV-GLFARFVIYFP 242

The following BLAST results are available for this feature:
BLAST of MELO3C033394.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008464344.12.3e-2970.65PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo][more]
XP_022155138.11.4e-1854.02uncharacterized protein LOC111022279 [Momordica charantia][more]
XP_023000630.17.2e-1547.73uncharacterized protein LOC111494874 [Cucurbita maxima][more]
XP_023006010.13.9e-1343.97uncharacterized protein LOC111498887 [Cucurbita maxima][more]
XP_023548334.11.1e-1242.24uncharacterized protein LOC111807002 [Cucurbita pepo subsp. pepo][more]
BLAST of MELO3C033394.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C033394.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C033394.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CL88|A0A1S3CL88_CUCME1.5e-2970.65uncharacterized protein LOC103502250 OS=Cucumis melo OX=3656 GN=LOC103502250 PE=... [more]
tr|A0A1S3C8J1|A0A1S3C8J1_CUCME2.1e-1055.56uncharacterized protein LOC103498010 OS=Cucumis melo OX=3656 GN=LOC103498010 PE=... [more]
tr|A0A0A0KCY3|A0A0A0KCY3_CUCSA8.1e-0736.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002350 PE=4 SV=1[more]
tr|A0A1S3C8E9|A0A1S3C8E9_CUCME1.5e-0535.16uncharacterized protein LOC103498005 OS=Cucumis melo OX=3656 GN=LOC103498005 PE=... [more]
tr|A0A0A0K7E0|A0A0A0K7E0_CUCSA2.6e-0530.53Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002300 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033394.2.1MELO3C033394.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C033394.2Silver-seed gourdcarmedB0593
MELO3C033394.2Silver-seed gourdcarmedB1010
MELO3C033394.2Cucumber (Chinese Long) v3cucmedB321
MELO3C033394.2Watermelon (97103) v2medwmbB538
MELO3C033394.2Wax gourdmedwgoB656
MELO3C033394.2Wax gourdmedwgoB659
MELO3C033394.2Cucumber (Gy14) v2cgybmedB280
MELO3C033394.2Cucumber (Gy14) v1cgymedB548
MELO3C033394.2Cucurbita maxima (Rimu)cmamedB693
MELO3C033394.2Cucurbita maxima (Rimu)cmamedB899
MELO3C033394.2Cucurbita moschata (Rifu)cmomedB685
MELO3C033394.2Cucurbita moschata (Rifu)cmomedB888
MELO3C033394.2Cucurbita pepo (Zucchini)cpemedB089
MELO3C033394.2Cucurbita pepo (Zucchini)cpemedB542
MELO3C033394.2Wild cucumber (PI 183967)cpimedB314
MELO3C033394.2Cucumber (Chinese Long) v2cumedB311
MELO3C033394.2Bottle gourd (USVL1VR-Ls)lsimedB164
MELO3C033394.2Watermelon (Charleston Gray)medwcgB529
MELO3C033394.2Watermelon (Charleston Gray)medwcgB532
MELO3C033394.2Watermelon (97103) v1medwmB575