MELO3C033377.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C033377.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Myb/SANT-like DNA-binding domain protein
Location	chr08 : 23811593 .. 23813305 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACGCGTGCCATGAATTTTTATCATGCCTTTTTTTACTGTTAAATTGTGAAATTACTTACGTACTCCATGTATTTTTTCTAATTTCTCATTCTCAGTATGTCAACCTCAAATCGTGCCCCGAGACATGTCTGGACGAAGGAGGAGGAGGGCACTCTTGTGGAATGTTTAATGGAGTTGTGTCAATGGGGGGATGGAAATCAGATAATGGTACGTTCCGCTCAGGTTACCTTGCACAGTTGGTACACATGATGGTGGAGAAACTACCTGGATGTCAGGTCTGAGCAGCAATTGTAATTGATTGTAGAATTAAGACACTGAAGCGAACATTCCAGGCCATTGTCGAAATGCGAGGTGCAGCGTGCAGTGGCTTTGGGTGGAACAATGAAGAGAAATGTATCATTGCGGAGAAGGAATTATTTGATAATTGGGCTAGGGTAAGGAAAATAATTTAAACGTCACACAACGTTCACAATGTACATTTACTTAACAATTTTTCAATCAGTACTCTTACGTGATATTTTTTTTGCCCGCAGTCGCATCCTACAGCGAAGGGACTCCTGAACAAACAATTCCCGTATTACGACGAACTTACATATGTCTTCGGTCGCGATAGGGCGACCGGTCGCTTCGCTGAGACATTCGCGAACGTCGGGTCTAATGAGCCTGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGATGAGTTCCCGCCCGTGTACAGCCAGGGGATTGACCTCTTGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGACCTCTACGTATTTGCTTCGCCGTTCGGTACTTCTCCTCCGGTACAAGATCTTCTGCCGTCCGGTGCTTCATTCCATTCGTGCTCTTTATCTTTTGTTCGTTTCCTTCACTCTCTTTTCTCCCGTTTGTATTTTTTTTCTGAAATTTGAGTTACTTGATTGCTATTTTAAGTGTGTATGCTTTATAATCTTTGTATTCAAATTAAGTATGATTTGGGTGTACGAATTTGCTCAATATTTTTAGCTAATATTAAGGCTCTCATATTTTCCACTTTCTGATGCATATCAGTAGGCTAGATGAATACTTTCTTTTGCATATCAGTTGGCTTCATTACCTGAAGGCTTTGGTTAACGGAGCTTCCATGTTTTATTATTATACTCAGTAAGCATTCGCTTCTTACTATGATTATCATGTTGCCTATCTTAAATTAAAGTACAGCAAATTAAACTTTTTGTGTATTACTATTTTGTCTCGGATGAATTGTTCTAGTCATTACTTCTCGCTGTTTTGTTTATCAGAACAATTGAGTCAGTGATCGTTTTCTGTCACTTCATAAATTTACGTTAATTGCATTCCAAATTTCTGTACACGAAAGTAGAAAATAAATCAGTCAATGGAAATGTACCGAAATCAGTAGACCAAAGTAGGAACGAAATCAATTAATGGAATGCATCCGAAATCAGTAGAAATAAATCAGTGAATCGAAAAGTAACGAAATCGGCGAATGGAAATCAACCACAAAATGTATGAGATGTAACATAAGCATTCAGATGTATGTGCATACAGGTAAAGATCTACTCATCATCGGCTTGTGTTTGAAAATAGTAGGATTCAAACATAAGAATACCTCTCTACCATGCTCAATTTAGACCTATTGCTAGCCAAGACCAAGAAGCACCTGTTCTACATCATTGA

mRNA sequence

ATGTACGCGTGCCATGAATTTTTATCATGCCTTTTTTTACTGTTAAATTGTGAAATTACTTACGTACTCCATGTATTTTTTCTAATTTCTCATTCTCAGTATGTCAACCTCAAATCGTGCCCCGAGACATGTCTGGACGAAGGAGGAGGAGGGCACTCTTGTGGAATGTTTAATGGAGTTGTGTCAATGGGGGGATGGAAATCAGATAATGGTACGTTCCGCTCAGGTTACCTTGCACAGTTGGTACACATGATGGTGGAGAAACTACCTGGATGTCAGACACTGAAGCGAACATTCCAGGCCATTGTCGAAATGCGAGGTGCAGCGTGCAGTGGCTTTGGGTGGAACAATGAAGAGAAATGTATCATTGCGGAGAAGGAATTATTTGATAATTGGGCTAGGTCGCATCCTACAGCGAAGGGACTCCTGAACAAACAATTCCCGTATTACGACGAACTTACATATGTCTTCGGTCGCGATAGGGCGACCGGTCGCTTCGCTGAGACATTCGCGAACGTCGGGTCTAATGAGCCTGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGATGAGTTCCCGCCCGTGTACAGCCAGGGGATTGACCTCTTGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGACCTCTACGTATTTGCTTCGCCGTTCGGTACTTCTCCTCCGGTACAAGATCTTCTGCCGTCCGGATTCAAACATAAGAATACCTCTCTACCATGCTCAATTTAGACCTATTGCTAGCCAAGACCAAGAAGCACCTGTTCTACATCATTGA

Coding sequence (CDS)

ATGTACGCGTGCCATGAATTTTTATCATGCCTTTTTTTACTGTTAAATTGTGAAATTACTTACGTACTCCATGTATTTTTTCTAATTTCTCATTCTCAGTATGTCAACCTCAAATCGTGCCCCGAGACATGTCTGGACGAAGGAGGAGGAGGGCACTCTTGTGGAATGTTTAATGGAGTTGTGTCAATGGGGGGATGGAAATCAGATAATGGTACGTTCCGCTCAGGTTACCTTGCACAGTTGGTACACATGATGGTGGAGAAACTACCTGGATGTCAGACACTGAAGCGAACATTCCAGGCCATTGTCGAAATGCGAGGTGCAGCGTGCAGTGGCTTTGGGTGGAACAATGAAGAGAAATGTATCATTGCGGAGAAGGAATTATTTGATAATTGGGCTAGGTCGCATCCTACAGCGAAGGGACTCCTGAACAAACAATTCCCGTATTACGACGAACTTACATATGTCTTCGGTCGCGATAGGGCGACCGGTCGCTTCGCTGAGACATTCGCGAACGTCGGGTCTAATGAGCCTGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGATGAGTTCCCGCCCGTGTACAGCCAGGGGATTGACCTCTTGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGACCTCTACGTATTTGCTTCGCCGTTCGGTACTTCTCCTCCGGTACAAGATCTTCTGCCGTCCGGATTCAAACATAAGAATACCTCTCTACCATGCTCAATTTAGACCTATTGCTAGCCAAGACCAAGAAGCACCTGTTCTACATCATTGA

Protein sequence

MYACHEFLSCLFLLLNCEITYVLHVFFLISHSQYVNLKSCPETCLDEGGGGHSCGMFNGVVSMGGWKSDNGTFRSGYLAQLVHMMVEKLPGCQTLKRTFQAIVEMRGAACSGFGWNNEEKCIIAEKELFDNWARSHPTAKGLLNKQFPYYDELTYVFGRDRATGRFAETFANVGSNEPGGGYDRFDMGDGNDEFPPVYSQGIDLLQDDVRASRPSRASEGRTSTYLLRRSVLLLRYKIFCRPDSNIRIPLYHAQFRPIASQDQEAPVLHH

Homology

[Close]

BLAST of MELO3C033377.2 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 291.6 bits (745), Expect = 2.8e-75
Identity = 141/178 (79.21%), Postives = 150/178 (84.27%), Query Frame = 0


Query: 50  GGHSCGMFNGVVSMGGWKSDNGTFRSGYLAQLVHMMVEKLPGCQ------------TLKR 109
           GG SCGM   +VSMGGWKSDNGTFR GYLAQLV MM EKL GCQ            TLKR
Sbjct: 336 GGDSCGM--ELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKR 395

Query: 110 TFQAIVEMRGAACSGFGWNNEEKCIIAEKELFDNWARSHPTAKGLLNKQFPYYDELTYVF 169
           TFQAI EM G ACSGFGWN+EEKCI+AEKELFDNW RS P AKGLLN  FPYYDELTYVF
Sbjct: 396 TFQAIAEMLGPACSGFGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYYDELTYVF 455

Query: 170 GRDRATGRFAETFANVGSNEPGGGYDRFDMGDGNDEFPPVYSQGIDLLQDDVRASRPS 216
           GRDRATGRFAETFA+VGSNEPGGGYDRFDMGDGN++FPPVYS+G+D+LQDDVRASRPS
Sbjct: 456 GRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSRGVDILQDDVRASRPS 511

[Close]

BLAST of MELO3C033377.2 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo])

HSP 1 Score: 202.6 bits (514), Expect = 1.7e-48
Identity = 101/191 (52.88%), Postives = 131/191 (68.59%), Query Frame = 0


Query: 60  VVSMGGWKSDNGTFRSGYLAQLVHMMVEKLPG------------CQTLKRTFQAIVEMRG 119
           +VS GGW+SDNGTF+ GYLAQL  MM EKLPG             ++LK+T+ AI EMRG
Sbjct: 27  LVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRG 86

Query: 120 AACSGFGWNNEEKCIIAEKELFDNWARSHPTAKGLLNKQFPYYDELTYVFGRDRATGRFA 179
            +CSGFGWN E +CIIAE++LFD+W +SHP AKGLL+K FPYYD+L+YVFG+DRATG  +
Sbjct: 87  PSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARS 146

Query: 180 ETFANVGSNEPGGGYDRFDMGDGNDE-FPPVYSQGIDLLQDDVRASRPSRASEGRTSTYL 238
           ETF NVGSN      D   +GD +DE  P +YSQG+ +  D++   R  +ASE R  + +
Sbjct: 147 ETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSV 206

[Close]

BLAST of MELO3C033377.2 vs. NCBI nr
Match: XP_008466949.1 (PREDICTED: uncharacterized protein LOC103504332, partial [Cucumis melo])

HSP 1 Score: 193.4 bits (490), Expect = 1.0e-45
Identity = 93/166 (56.02%), Postives = 121/166 (72.89%), Query Frame = 0


Query: 60  VVSMGGWKSDNGTFRSGYLAQLVHMMVEKLPG-----------CQTLKRTFQAIVEMRGA 119
           +V++GGW+SDNGTFR GYL QL  MM  K+PG            + +KR F A+ EMRG 
Sbjct: 23  LVNVGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHASTIDSRIKLMKRMFHALAEMRGP 82

Query: 120 ACSGFGWNNEEKCIIAEKELFDNWARSHPTAKGLLNKQFPYYDELTYVFGRDRATGRFAE 179
            CSGFGWN+E+KCI+AEKE+FD+W +SHPTAKGLLNK F +YDEL+YVFG+DRATG  AE
Sbjct: 83  NCSGFGWNDEKKCIVAEKEVFDDWVKSHPTAKGLLNKSFVHYDELSYVFGKDRATGGRAE 142

Query: 180 TFANVGSNEPGGGYDRFDMGDGND-EFPPVYSQGIDLLQDDVRASR 214
           +FA++GSN+P  GYD F      D +FPP+YS  +++  DD+  +R
Sbjct: 143 SFADIGSNDP-PGYDAFAADAMPDTDFPPMYSLRLNMSPDDLMETR 187

[Close]

BLAST of MELO3C033377.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 191.8 bits (486), Expect = 3.0e-45
Identity = 95/177 (53.67%), Postives = 124/177 (70.06%), Query Frame = 0


Query: 60  VVSMGGWKSDNGTFRSGYLAQLVHMMVEKLPG-----------CQTLKRTFQAIVEMRGA 119
           +V+ GGW+SDNGTFR GYL QL  MM  K+PG            + +KR F A+ EMRG 
Sbjct: 382 LVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHASTIDSRIKLMKRMFHALAEMRGP 441

Query: 120 ACSGFGWNNEEKCIIAEKELFDNWARSHPTAKGLLNKQFPYYDELTYVFGRDRATGRFAE 179
            CSGFGWN+E+KCI+AEKE+FD+W  SHP AKGLLNK F +YDEL+YVFG+DRATG  AE
Sbjct: 442 NCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAE 501

Query: 180 TFANVGSNEPGGGYDRFDMGDG----NDEFPPVYSQGIDLLQDDVRASRPSRASEGR 222
           +FA++GSN+P G    +D G      + +FPP+YS G+++  DD+  +R +R SE R
Sbjct: 502 SFADIGSNDPPG----YDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERR 552

[Close]

BLAST of MELO3C033377.2 vs. NCBI nr
Match: XP_008459131.1 (PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo])

HSP 1 Score: 179.5 bits (454), Expect = 1.5e-41
Identity = 95/182 (52.20%), Postives = 118/182 (64.84%), Query Frame = 0


Query: 60  VVSMGGWKSDNGTFRSGYLAQLVHMMVEKLPGC-----------QTLKRTFQAIVEMRGA 119
           +V+ GGW+SDNGTF  GYL QL  MM  K+PGC           + LKR F A+ EMRG 
Sbjct: 23  LVNAGGWRSDNGTFHPGYLNQLARMMAFKIPGCNIHASTIDSRIKLLKRMFHALAEMRGP 82

Query: 120 ACSGFGWNNEEKCIIAEKELFDNWARSHPTAKGLLNKQFPYYDELTYVFGRDRATGRFAE 179
            CSGFGWN+E+KCI+AEKE       SHP AKGLLNK F +YDEL+YVFG+DRATG  AE
Sbjct: 83  NCSGFGWNDEKKCIVAEKE-------SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAE 142

Query: 180 TFANVGSNEPGGGYDRFDMGDGND-EFPPVYSQGIDLLQDDVRASRPSRASEGRTSTYLL 230
            FA++GSN+P  GYD F      D  F P+YS  +++  DD+  +R +R SE R  +   
Sbjct: 143 IFADIGSNDP-AGYDAFVADAAPDTNFSPMYSPRLNMSPDDLMETRTARVSERRNVSSGS 196

[Close]

BLAST of MELO3C033377.2 vs. TAIR10
Match: AT5G27260.1 (unknown protein)

HSP 1 Score: 51.6 bits (122), Expect = 8.8e-07
Identity = 25/73 (34.25%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 95  LKRTFQAIVEMRGAACSGFGWNNEEKCIIAEKELFDNWARSHPTAKGLLNKQFPYYDELT 154
           LK  +Q+ ++++  + SGFGW+   K   A  E++ ++ ++HP  K L    F ++DEL 
Sbjct: 77  LKIQYQSCLDLQRFS-SGFGWDPLTKRFTASDEVWSDYLKAHPNNKQLRYDTFEFFDELQ 136

Query: 155 YVFGRDRATGRFA 168
            +FG   ATG+ A
Sbjct: 137 IIFGEGVATGKNA 148

[Close]

BLAST of MELO3C033377.2 vs. TAIR10
Match: AT4G02210.1 (unknown protein)

HSP 1 Score: 45.8 bits (107), Expect = 4.8e-05
Identity = 18/66 (27.27%), Postives = 37/66 (56.06%), Query Frame = 0


Query: 93  QTLKRTFQAIVEMRGAACSGFGWNNEEKCIIAEKELFDNWARSHPTAKGLLNKQFPYYDE 152
           ++L+R F AI  +      GF W+NE + + A+  ++ ++ ++H  A+  + +  PYY +
Sbjct: 242 KSLRRQFNAIKSI--LRSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYKD 301

Query: 153 LTYVFG 159
           L  + G
Sbjct: 302 LCVLCG 305

[Close]

BLAST of MELO3C033377.2 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.8e-75
Identity = 141/178 (79.21%), Postives = 150/178 (84.27%), Query Frame = 0


Query: 50  GGHSCGMFNGVVSMGGWKSDNGTFRSGYLAQLVHMMVEKLPGCQ------------TLKR 109
           GG SCGM   +VSMGGWKSDNGTFR GYLAQLV MM EKL GCQ            TLKR
Sbjct: 336 GGDSCGM--ELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKR 395

Query: 110 TFQAIVEMRGAACSGFGWNNEEKCIIAEKELFDNWARSHPTAKGLLNKQFPYYDELTYVF 169
           TFQAI EM G ACSGFGWN+EEKCI+AEKELFDNW RS P AKGLLN  FPYYDELTYVF
Sbjct: 396 TFQAIAEMLGPACSGFGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYYDELTYVF 455

Query: 170 GRDRATGRFAETFANVGSNEPGGGYDRFDMGDGNDEFPPVYSQGIDLLQDDVRASRPS 216
           GRDRATGRFAETFA+VGSNEPGGGYDRFDMGDGN++FPPVYS+G+D+LQDDVRASRPS
Sbjct: 456 GRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSRGVDILQDDVRASRPS 511

[Close]

BLAST of MELO3C033377.2 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.1e-48
Identity = 101/191 (52.88%), Postives = 131/191 (68.59%), Query Frame = 0


Query: 60  VVSMGGWKSDNGTFRSGYLAQLVHMMVEKLPG------------CQTLKRTFQAIVEMRG 119
           +VS GGW+SDNGTF+ GYLAQL  MM EKLPG             ++LK+T+ AI EMRG
Sbjct: 27  LVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRG 86

Query: 120 AACSGFGWNNEEKCIIAEKELFDNWARSHPTAKGLLNKQFPYYDELTYVFGRDRATGRFA 179
            +CSGFGWN E +CIIAE++LFD+W +SHP AKGLL+K FPYYD+L+YVFG+DRATG  +
Sbjct: 87  PSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARS 146

Query: 180 ETFANVGSNEPGGGYDRFDMGDGNDE-FPPVYSQGIDLLQDDVRASRPSRASEGRTSTYL 238
           ETF NVGSN      D   +GD +DE  P +YSQG+ +  D++   R  +ASE R  + +
Sbjct: 147 ETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSV 206

[Close]

BLAST of MELO3C033377.2 vs. TrEMBL
Match: tr|A0A1S3CTN6|A0A1S3CTN6_CUCME (uncharacterized protein LOC103504332 OS=Cucumis melo OX=3656 GN=LOC103504332 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 6.8e-46
Identity = 93/166 (56.02%), Postives = 121/166 (72.89%), Query Frame = 0


Query: 60  VVSMGGWKSDNGTFRSGYLAQLVHMMVEKLPG-----------CQTLKRTFQAIVEMRGA 119
           +V++GGW+SDNGTFR GYL QL  MM  K+PG            + +KR F A+ EMRG 
Sbjct: 23  LVNVGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHASTIDSRIKLMKRMFHALAEMRGP 82

Query: 120 ACSGFGWNNEEKCIIAEKELFDNWARSHPTAKGLLNKQFPYYDELTYVFGRDRATGRFAE 179
            CSGFGWN+E+KCI+AEKE+FD+W +SHPTAKGLLNK F +YDEL+YVFG+DRATG  AE
Sbjct: 83  NCSGFGWNDEKKCIVAEKEVFDDWVKSHPTAKGLLNKSFVHYDELSYVFGKDRATGGRAE 142

Query: 180 TFANVGSNEPGGGYDRFDMGDGND-EFPPVYSQGIDLLQDDVRASR 214
           +FA++GSN+P  GYD F      D +FPP+YS  +++  DD+  +R
Sbjct: 143 SFADIGSNDP-PGYDAFAADAMPDTDFPPMYSLRLNMSPDDLMETR 187

[Close]

BLAST of MELO3C033377.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 2.0e-45
Identity = 95/177 (53.67%), Postives = 124/177 (70.06%), Query Frame = 0


Query: 60  VVSMGGWKSDNGTFRSGYLAQLVHMMVEKLPG-----------CQTLKRTFQAIVEMRGA 119
           +V+ GGW+SDNGTFR GYL QL  MM  K+PG            + +KR F A+ EMRG 
Sbjct: 382 LVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHASTIDSRIKLMKRMFHALAEMRGP 441

Query: 120 ACSGFGWNNEEKCIIAEKELFDNWARSHPTAKGLLNKQFPYYDELTYVFGRDRATGRFAE 179
            CSGFGWN+E+KCI+AEKE+FD+W  SHP AKGLLNK F +YDEL+YVFG+DRATG  AE
Sbjct: 442 NCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAE 501

Query: 180 TFANVGSNEPGGGYDRFDMGDG----NDEFPPVYSQGIDLLQDDVRASRPSRASEGR 222
           +FA++GSN+P G    +D G      + +FPP+YS G+++  DD+  +R +R SE R
Sbjct: 502 SFADIGSNDPPG----YDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERR 552

[Close]

BLAST of MELO3C033377.2 vs. TrEMBL
Match: tr|A0A1S3C8Z4|A0A1S3C8Z4_CUCME (uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.0e-41
Identity = 95/182 (52.20%), Postives = 118/182 (64.84%), Query Frame = 0


Query: 60  VVSMGGWKSDNGTFRSGYLAQLVHMMVEKLPGC-----------QTLKRTFQAIVEMRGA 119
           +V+ GGW+SDNGTF  GYL QL  MM  K+PGC           + LKR F A+ EMRG 
Sbjct: 23  LVNAGGWRSDNGTFHPGYLNQLARMMAFKIPGCNIHASTIDSRIKLLKRMFHALAEMRGP 82

Query: 120 ACSGFGWNNEEKCIIAEKELFDNWARSHPTAKGLLNKQFPYYDELTYVFGRDRATGRFAE 179
            CSGFGWN+E+KCI+AEKE       SHP AKGLLNK F +YDEL+YVFG+DRATG  AE
Sbjct: 83  NCSGFGWNDEKKCIVAEKE-------SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAE 142

Query: 180 TFANVGSNEPGGGYDRFDMGDGND-EFPPVYSQGIDLLQDDVRASRPSRASEGRTSTYLL 230
            FA++GSN+P  GYD F      D  F P+YS  +++  DD+  +R +R SE R  +   
Sbjct: 143 IFADIGSNDP-AGYDAFVADAAPDTNFSPMYSPRLNMSPDDLMETRTARVSERRNVSSGS 196

The following BLAST results are available for this feature:

BLAST of MELO3C033377.2 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN33754.1	2.8e-75	79.21	retrotransposon protein [Cucumis melo subsp. melo]	[more]
XP_008441954.1	1.7e-48	52.88	PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]	[more]
XP_008466949.1	1.0e-45	56.02	PREDICTED: uncharacterized protein LOC103504332, partial [Cucumis melo]	[more]
ADN34114.1	3.0e-45	53.67	retrotransposon protein [Cucumis melo subsp. melo]	[more]
XP_008459131.1	1.5e-41	52.20	PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo]	[more]

BLAST of MELO3C033377.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G27260.1	8.8e-07	34.25	unknown protein	[more]
AT4G02210.1	4.8e-05	27.27	unknown protein	[more]

BLAST of MELO3C033377.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C033377.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|E5GBB2\|E5GBB2_CUCME	1.8e-75	79.21	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S3B4L3\|A0A1S3B4L3_CUCME	1.1e-48	52.88	uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=...	[more]
tr\|A0A1S3CTN6\|A0A1S3CTN6_CUCME	6.8e-46	56.02	uncharacterized protein LOC103504332 OS=Cucumis melo OX=3656 GN=LOC103504332 PE=...	[more]
tr\|E5GCB5\|E5GCB5_CUCME	2.0e-45	53.67	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S3C8Z4\|A0A1S3C8Z4_CUCME	1.0e-41	52.20	uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033377.2.1	MELO3C033377.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31704:SF62	SUBFAMILY NOT NAMED	coord: 62..173
None	No IPR available	PANTHER	PTHR31704	FAMILY NOT NAMED	coord: 62..173

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C033377.2	Cucumber (Gy14) v2	cgybmedB285
MELO3C033377.2	Cucumber (Gy14) v1	cgymedB574
MELO3C033377.2	Cucurbita maxima (Rimu)	cmamedB706
MELO3C033377.2	Cucurbita maxima (Rimu)	cmamedB906
MELO3C033377.2	Cucurbita moschata (Rifu)	cmomedB701
MELO3C033377.2	Cucurbita moschata (Rifu)	cmomedB895
MELO3C033377.2	Cucurbita pepo (Zucchini)	cpemedB096
MELO3C033377.2	Wild cucumber (PI 183967)	cpimedB325
MELO3C033377.2	Cucumber (Chinese Long) v2	cumedB312
MELO3C033377.2	Bottle gourd (USVL1VR-Ls)	lsimedB159
MELO3C033377.2	Watermelon (Charleston Gray)	medwcgB522
MELO3C033377.2	Watermelon (97103) v1	medwmB565
MELO3C033377.2	Silver-seed gourd	carmedB0297
MELO3C033377.2	Silver-seed gourd	carmedB0534
MELO3C033377.2	Cucumber (Chinese Long) v3	cucmedB329
MELO3C033377.2	Watermelon (97103) v2	medwmbB526
MELO3C033377.2	Wax gourd	medwgoB663