MELO3C033356.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C033356.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionDiphthine synthase, putative
Locationchr08 : 21931067 .. 21934389 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAAGTAATAATTGGGAGGTTTGATTGATGTGATTTTTCTCTCTTCATAGGTATTTATTTGGTAACCCTCTAATTCTTTTATAGATTTAGTGAATATATATTTTGTTTTTCCTTCCATTAATGGAAAATATTTCATTGATTTTTCCTTGAAATATTTAACCCTATATGATAGTATATTCATTTGTAACTGTGAAATATGCTTCTTTTGCCTCTTGCATGAATATTCACAATAAAGAGGGAGGTCTTATGGGTTCAAATTCATATTTATAGTACCCTTAAGTGGGATTTCTATAGATGCTTGGTAGGAAACTAAAATTGGGTTTGGTGTGAGTTAATTTGTTCGAAAGTCATTCTTGGTTGCTTTGCATTTATATATATATATATATATATATATTAGACATAATGGCAACGAAAAGAGAGAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAATTCCGTAATATATTCTTGTTGATCCTTGTTTGCTTTCAAGTTGCATTGAGTTTTACGAACTTATTCAAGTTTCCTATTTAATACCAAACATATTTATTCAAAATGGTGCGATAGAAGAGGAAATTGGTTTAGTGATGATGAATGATATATTTTCACTACAAATGAGTATTTGAATGCCTTTTAACTTTTTCTTCTTCTTTTCTTTTTTTATGTAATCAATTTTTGTTGGCATAAATGGTGCTCAAGACCTCACTTCCTCGGCAAATACATATTGTAAAAAGGTTCTCAAGTTTGTTTGTTTGTTTGTTTTCAGTTTCTATGTTTATCATTGTTGTACATACAGTAGTAATAGTCTTGAGGTTCAGTTTATCAGTGGGGAAGAAAGCTCTCTTGGTTGGGGATAAGACAAAGCTAGGAAATGAAAGAGTGGCAGGTCAATATTCTACTCAATCAAATGAGGGCTGCAGTGAGTGGGAGCATATTTGTGCATTTTCTTTGATTGTGATAATTGAGATGTTTAATTGTTTACCTTTTTGTTCCTTACTTTATGCTCTATCACATTGGTGATTTTTTCTTCCCTGTTATATGTTTCGCAGATTTGTGACATGGTTACAATTGCAAGGTATTTGAACGTGACATTTATCTTACTTCTACCTTAATCAGGTTAGTTTTCTCTCCTCCACCTGCTCTGAATGTGAGAAAATGCGAAAAGGTTTACATGGAAGATTACACTTCTCTTTTATCCTTTGGCCTTGCTTCCGACGATACTTCTTCTCTGGTACTTCTCTTTTTTCCCTAATCTCTCCATCACAAAATTATTTTTCTCTATGAGATTTTTTGAATTCGAATTTTCGAACAGGAGAAGCTCTACGAAAAAACTATTACAGTTGCAGAGCAGGAAATGGTGGAGGAGAAGGCTGATTAGATACTCTCCAAAGCTCATACTTCTAATGTTGCTTTTCTTGTTGTTGGCGACGTTTTTTAGTACGAAGTTTTCGATTTTCCCCCTATTTTGATATTGAAGATTTTTGTGATTTTGGATGATTCTACTATGATCTCAATTCTATCAATGTTTAAATTGCAAATTAAGAACTTTAAAAAATCCTCCATTACAATTTCTATTTTAAAACAATTAAAGTTTCACAATTCTTCAAATGCTTGGATTGATGTTTATTAGATAGAATTGCAAAAATCAAATTTTTATTGAAACTCTAAGTTGATTTTAAATAAGATCAAGTGAAAAATAGCGATCTAATTGAAAGCTCAGGCTTAATGTCATTGAATGTCTCATTATTGGAGATTTGGAGACCTTTTTCTACTATGAAGATGTTTGCAATGGAATTTTCTTTTGAGCTAAATATTTTTCTTCCTCTACATACTGTGTCATAATACAGAGCTACTATCCACTCTGATCTGGTAGTTCGAGCAAAGAGTTTGGGGATTGAAGTCAGAGTGGTGTACAATGCATATGTGATGAATATTATTGGAATTTGTGGATTATAATTATATTGCTATGAGGAAACGATTTCAATACCATTTTTTATTGAAACGTGGAAACCGAGTAGCTCCTACGAGAAGATTCAGAAAAACCGTGGACTTGGTTTGCACACACTCTGCTTGTTAGGTAGGAATTAGGATTTTGTTCCTAATGATTCAAATAGAAAAATTATGACTCAACATGAAAAATATTGTTGAAGTTAAGCTAATCCCATAGTTGTGAAATATCATGTTCTGTAAACCTTTTTTTTTTCCAATATTTAGAGAATGACATAATTTAGGCTTTGTTTATGTTTAAGTCATGATGTTTGTTTCGTCTGTAGTGATGCCGACTTGCCAACAAGTCAATTTTCTGAATTTTAAAGTAGCTTTAGTTTTAATATTGTGTTCTCTTTTATAGTATTGATTTAGTTGTGCATTTGGCTGAAGgTTAAAGACTGAGAAGGTTGAAGGTTGAAGCGAGTGACATTAGTAATATTGTGTAGATAGCTAGGCAATCGTTGAAGGTTGAAGATTTTCAAGGCGTTTAAGATTTCTTATTTAAGTCTTGTATTAGGATCTTGTTTCATGTA

mRNA sequence

ATGGAAAAAATTTGTGACATGGTTACAATTGCAAGGTTAGTTTTCTCTCCTCCACCTGCTCTGAATGTGAGAAAATGCGAAAAGGTTTACATGGAAGATTACACTTCTCTTTTATCCTTTGGCCTTGCTTCCGACGATACTTCTTCTCTGGAGAAGCTCTACGAAAAAACTATTACAGTTGCAGAGCAGGAAATGGTGGAGGAGAAGGCTGATTAGATACTCTCCAAAGCTCATACTTCTAATGTTGCTTTTCTTGTTGTTGGCGACGTTTTTTAAGCTACTATCCACTCTGATCTGGTAGTTCGAGCAAAGAGTTTGGGGATTGAAGTCAGAGTGGTGTACAATGCATATGTGATGAATATTATTGGAATTTGTGGATTATAATTATATTGCTATGAGGAAACGATTTCAATACCATTTTTTATTGAAACGTGGAAACCGAGTAGCTCCTACGAGAAGATTCAGAAAAACCGTGGACTTGGTTTGCACACACTCTGCTTGTTAGgTTAAAGACTGAGAAGGTTGAAGGTTGAAGCGAGTGACATTAGTAATATTGTGTAGATAGCTAGGCAATCGTTGAAGGTTGAAGATTTTCAAGGCGTTTAAGATTTCTTATTTAAGTCTTGTATTAGGATCTTGTTTCATGTA

Coding sequence (CDS)

ATGGAAAAAATTTGTGACATGGTTACAATTGCAAGGTTAGTTTTCTCTCCTCCACCTGCTCTGAATGTGAGAAAATGCGAAAAGGTTTACATGGAAGATTACACTTCTCTTTTATCCTTTGGCCTTGCTTCCGACGATACTTCTTCTCTGGAGAAGCTCTACGAAAAAACTATTACAGTTGCAGAGCAGGAAATGGTGGAGGAGAAGGCTGATTAG

Protein sequence

MEKICDMVTIARLVFSPPPALNVRKCEKVYMEDYTSLLSFGLASDDTSSLEKLYEKTITVAEQEMVEEKAD
Homology
[Close]
BLAST of MELO3C033356.2 vs. NCBI nr
Match: XP_004152655.1 (PREDICTED: probable diphthine synthase isoform X1 [Cucumis sativus] >KGN62668.1 hypothetical protein Csa_2G367220 [Cucumis sativus])

HSP 1 Score: 82.4 bits (202), Expect = 6.7e-13
Identity = 43/49 (87.76%), Postives = 45/49 (91.84%), Query Frame = 0 

Query: 23 VRKCEKVYMEDYTSLLSFGLASDDTSSLEKLYEKTITVAEQEMVEEKAD 72
          VRKCEKVYME YTSLLSFGLASD  SSLEKLY KTITVA++EMVEEKAD
Sbjct: 23 VRKCEKVYMEAYTSLLSFGLASDGISSLEKLYGKTITVADREMVEEKAD 71

[Close]
BLAST of MELO3C033356.2 vs. NCBI nr
Match: XP_008444788.1 (PREDICTED: probable diphthine methyl ester synthase [Cucumis melo])

HSP 1 Score: 82.4 bits (202), Expect = 6.7e-13
Identity = 43/49 (87.76%), Postives = 45/49 (91.84%), Query Frame = 0 

Query: 23 VRKCEKVYMEDYTSLLSFGLASDDTSSLEKLYEKTITVAEQEMVEEKAD 72
          VRKCEKVYME YTSLLSFGLASD  SSLEKLY KTITVA++EMVEEKAD
Sbjct: 23 VRKCEKVYMEAYTSLLSFGLASDGISSLEKLYGKTITVADREMVEEKAD 71

[Close]
BLAST of MELO3C033356.2 vs. NCBI nr
Match: XP_011649649.1 (PREDICTED: probable diphthine synthase isoform X2 [Cucumis sativus])

HSP 1 Score: 82.4 bits (202), Expect = 6.7e-13
Identity = 43/49 (87.76%), Postives = 45/49 (91.84%), Query Frame = 0 

Query: 23 VRKCEKVYMEDYTSLLSFGLASDDTSSLEKLYEKTITVAEQEMVEEKAD 72
          VRKCEKVYME YTSLLSFGLASD  SSLEKLY KTITVA++EMVEEKAD
Sbjct: 23 VRKCEKVYMEAYTSLLSFGLASDGISSLEKLYGKTITVADREMVEEKAD 71

[Close]
BLAST of MELO3C033356.2 vs. NCBI nr
Match: XP_022961663.1 (probable diphthine methyl ester synthase [Cucurbita moschata] >XP_022996987.1 probable diphthine methyl ester synthase [Cucurbita maxima])

HSP 1 Score: 82.4 bits (202), Expect = 6.7e-13
Identity = 43/49 (87.76%), Postives = 45/49 (91.84%), Query Frame = 0 

Query: 23 VRKCEKVYMEDYTSLLSFGLASDDTSSLEKLYEKTITVAEQEMVEEKAD 72
          VRKCEKVYME YTSLLSFGLASD  SSLEKLY KTITVA++EMVEEKAD
Sbjct: 23 VRKCEKVYMEAYTSLLSFGLASDGISSLEKLYGKTITVADREMVEEKAD 71

[Close]
BLAST of MELO3C033356.2 vs. NCBI nr
Match: XP_023547198.1 (probable diphthine methyl ester synthase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 82.4 bits (202), Expect = 6.7e-13
Identity = 43/49 (87.76%), Postives = 45/49 (91.84%), Query Frame = 0 

Query: 23 VRKCEKVYMEDYTSLLSFGLASDDTSSLEKLYEKTITVAEQEMVEEKAD 72
          VRKCEKVYME YTSLLSFGLASD  SSLEKLY KTITVA++EMVEEKAD
Sbjct: 23 VRKCEKVYMEAYTSLLSFGLASDGISSLEKLYGKTITVADREMVEEKAD 71

[Close]
BLAST of MELO3C033356.2 vs. TAIR10
Match: AT4G31790.1 (Tetrapyrrole (Corrin/Porphyrin) Methylases)

HSP 1 Score: 63.5 bits (153), Expect = 5.9e-11
Identity = 32/48 (66.67%), Postives = 40/48 (83.33%), Query Frame = 0 

Query: 23 VRKCEKVYMEDYTSLLSFGLASDDTSSLEKLYEKTITVAEQEMVEEKA 71
          V+K +KVYME YTSLLSFGL++D  S+LEK Y K I +A++EMVEEKA
Sbjct: 23 VKKSQKVYMEAYTSLLSFGLSADGLSNLEKFYGKPIILADREMVEEKA 70

[Close]
BLAST of MELO3C033356.2 vs. Swiss-Prot
Match: sp|O81769|DPH5_ARATH (Probable diphthine methyl ester synthase OS=Arabidopsis thaliana OX=3702 GN=At4g31790 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.1e-09
Identity = 32/48 (66.67%), Postives = 40/48 (83.33%), Query Frame = 0 

Query: 23 VRKCEKVYMEDYTSLLSFGLASDDTSSLEKLYEKTITVAEQEMVEEKA 71
          V+K +KVYME YTSLLSFGL++D  S+LEK Y K I +A++EMVEEKA
Sbjct: 23 VKKSQKVYMEAYTSLLSFGLSADGLSNLEKFYGKPIILADREMVEEKA 70

[Close]
BLAST of MELO3C033356.2 vs. TrEMBL
Match: tr|A0A1S3BC13|A0A1S3BC13_CUCME (probable diphthine methyl ester synthase OS=Cucumis melo OX=3656 GN=LOC103488034 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.4e-13
Identity = 43/49 (87.76%), Postives = 45/49 (91.84%), Query Frame = 0 

Query: 23 VRKCEKVYMEDYTSLLSFGLASDDTSSLEKLYEKTITVAEQEMVEEKAD 72
          VRKCEKVYME YTSLLSFGLASD  SSLEKLY KTITVA++EMVEEKAD
Sbjct: 23 VRKCEKVYMEAYTSLLSFGLASDGISSLEKLYGKTITVADREMVEEKAD 71

[Close]
BLAST of MELO3C033356.2 vs. TrEMBL
Match: tr|A0A0A0LLL7|A0A0A0LLL7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G367220 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.4e-13
Identity = 43/49 (87.76%), Postives = 45/49 (91.84%), Query Frame = 0 

Query: 23 VRKCEKVYMEDYTSLLSFGLASDDTSSLEKLYEKTITVAEQEMVEEKAD 72
          VRKCEKVYME YTSLLSFGLASD  SSLEKLY KTITVA++EMVEEKAD
Sbjct: 23 VRKCEKVYMEAYTSLLSFGLASDGISSLEKLYGKTITVADREMVEEKAD 71

[Close]
BLAST of MELO3C033356.2 vs. TrEMBL
Match: tr|A0A218WRJ4|A0A218WRJ4_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr021341 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.4e-11
Identity = 38/49 (77.55%), Postives = 44/49 (89.80%), Query Frame = 0 

Query: 23  VRKCEKVYMEDYTSLLSFGLASDDTSSLEKLYEKTITVAEQEMVEEKAD 72
           VR+C+KVYME YTSLLSFGL+SD  S+LEKLY K ITVA++EMVEEKAD
Sbjct: 67  VRRCDKVYMEAYTSLLSFGLSSDGLSTLEKLYGKPITVADREMVEEKAD 115

[Close]
BLAST of MELO3C033356.2 vs. TrEMBL
Match: tr|A0A2I0L9Q8|A0A2I0L9Q8_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_002200 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.4e-11
Identity = 38/49 (77.55%), Postives = 44/49 (89.80%), Query Frame = 0 

Query: 23 VRKCEKVYMEDYTSLLSFGLASDDTSSLEKLYEKTITVAEQEMVEEKAD 72
          VR+C+KVYME YTSLLSFGL+SD  S+LEKLY K ITVA++EMVEEKAD
Sbjct: 23 VRRCDKVYMEAYTSLLSFGLSSDGLSTLEKLYGKPITVADREMVEEKAD 71

[Close]
BLAST of MELO3C033356.2 vs. TrEMBL
Match: tr|A0A2I0VME2|A0A2I0VME2_9ASPA (Putative diphthine synthase OS=Dendrobium catenatum OX=906689 GN=MA16_Dca015112 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-10
Identity = 37/49 (75.51%), Postives = 43/49 (87.76%), Query Frame = 0 

Query: 23 VRKCEKVYMEDYTSLLSFGLASDDTSSLEKLYEKTITVAEQEMVEEKAD 72
          V+ C+KVYME YTSLLSFGL+SD  S +EKLY KTITVA++EMVEEKAD
Sbjct: 23 VKSCKKVYMEAYTSLLSFGLSSDGLSRMEKLYGKTITVADREMVEEKAD 71

The following BLAST results are available for this feature:
BLAST of MELO3C033356.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004152655.16.7e-1387.76PREDICTED: probable diphthine synthase isoform X1 [Cucumis sativus] >KGN62668.1 ... [more]
XP_008444788.16.7e-1387.76PREDICTED: probable diphthine methyl ester synthase [Cucumis melo][more]
XP_011649649.16.7e-1387.76PREDICTED: probable diphthine synthase isoform X2 [Cucumis sativus][more]
XP_022961663.16.7e-1387.76probable diphthine methyl ester synthase [Cucurbita moschata] >XP_022996987.1 pr... [more]
XP_023547198.16.7e-1387.76probable diphthine methyl ester synthase [Cucurbita pepo subsp. pepo][more]
BLAST of MELO3C033356.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G31790.15.9e-1166.67Tetrapyrrole (Corrin/Porphyrin) Methylases[more]
BLAST of MELO3C033356.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O81769|DPH5_ARATH1.1e-0966.67Probable diphthine methyl ester synthase OS=Arabidopsis thaliana OX=3702 GN=At4g... [more]
BLAST of MELO3C033356.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BC13|A0A1S3BC13_CUCME4.4e-1387.76probable diphthine methyl ester synthase OS=Cucumis melo OX=3656 GN=LOC103488034... [more]
tr|A0A0A0LLL7|A0A0A0LLL7_CUCSA4.4e-1387.76Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G367220 PE=3 SV=1[more]
tr|A0A218WRJ4|A0A218WRJ4_PUNGR5.4e-1177.55Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr021341 PE=3 SV=1[more]
tr|A0A2I0L9Q8|A0A2I0L9Q8_PUNGR5.4e-1177.55Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_002200 PE=4 SV=1[more]
tr|A0A2I0VME2|A0A2I0VME2_9ASPA1.6e-1075.51Putative diphthine synthase OS=Dendrobium catenatum OX=906689 GN=MA16_Dca015112 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR0147774pyrrole_Mease_sub1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0032259 methylation
biological_process GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine
cellular_component GO:0005575 cellular_component
molecular_function GO:0004164 diphthine synthase activity
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0016740 transferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033356.2.1MELO3C033356.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014777Tetrapyrrole methylase, subdomain 1GENE3DG3DSA:3.40.1010.10coord: 20..71
e-value: 2.5E-8
score: 36.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C033356.2Cucumber (Gy14) v2cgybmedB285
MELO3C033356.2Cucumber (Gy14) v1cgymedB577
MELO3C033356.2Cucurbita maxima (Rimu)cmamedB698
MELO3C033356.2Cucurbita maxima (Rimu)cmamedB909
MELO3C033356.2Cucurbita moschata (Rifu)cmomedB689
MELO3C033356.2Cucurbita moschata (Rifu)cmomedB897
MELO3C033356.2Cucurbita pepo (Zucchini)cpemedB095
MELO3C033356.2Cucurbita pepo (Zucchini)cpemedB533
MELO3C033356.2Wild cucumber (PI 183967)cpimedB324
MELO3C033356.2Cucumber (Chinese Long) v2cumedB312
MELO3C033356.2Cucumber (Chinese Long) v2cumedB321
MELO3C033356.2Bottle gourd (USVL1VR-Ls)lsimedB159
MELO3C033356.2Watermelon (Charleston Gray)medwcgB522
MELO3C033356.2Watermelon (97103) v1medwmB565
MELO3C033356.2Silver-seed gourdcarmedB0298
MELO3C033356.2Silver-seed gourdcarmedB0858
MELO3C033356.2Cucumber (Chinese Long) v3cucmedB329
MELO3C033356.2Watermelon (97103) v2medwmbB526
MELO3C033356.2Wax gourdmedwgoB650
MELO3C033356.2Wax gourdmedwgoB670