MELO3C033279.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C033279.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUlp1 protease family, carboxy-terminal domain protein
Locationchr08 : 16976757 .. 16978885 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAGTGAGAGGAAGAAACAAAAATGTAATTCGAGTGTCAGGCCCTCATTTGTGGTTTGTGGTTTGCTTTCACACATAACTCACATAAGCAAAGGGTCATTGTTCGAGTGTTTTTAAAACCTAGGCCAAATTTCATTTCGGTCGTCAAAAGAGGCCATTTTCCAAATATATTTGGAGTGTTTTTCAAACCTAGACCAAATTTCATTTGGGCTCTAAAAAGAGGCCATATGTACAAGTTTTTCGAAATAAAGACCTTTTTCCTTTTGAAAATGTCTTATTAAGTAGAACTTGGGGTGGAGGATTTGAACTTGAGACCTCTTGTTCTCATAAACAAACAGATGTCAGTTAAGCTGAGTTCATGTTGGCACTCTACGTCCTTGTTTTGCCTTGTGCTTAAGACTTTTAATCTTTGTGTGGAATAAGTTTTTGAACGTTTAATGTTATTTTTAATAGGTAGATGATACATTTAAACTTTTAGTAAAACTTATTTGACCTATGTCTAATAGAACTCTAAATTTTCAATTTTATCTAGTATAGCTAAAATTAATTTTTAAAAAATCAAATGTTCAAGGATTGTATTTATAATTTTGAAAGCTTGGAGAACATCAAAGTTTAATGACTAAATTTATAATTTAACATTTTTATTTTACACAACTAACTAAGTATAATTTGCACATTATGGATGTATGTTAGTTTTGGGAAACTTCATATGTGTATCTTTTATTAATTTTTTTAGTACACTAAATATAGAGGATTCAAACCACATACCTCTTACTTAAACTCTGATATTCTTTTGTAGGTCGTTCGACATAATGAAGAAGACAAAACAAAATTGGAGGGTGTGAAGGTATGTGAATATTTTTAACAGAAGTTAAGTCTTTTGTATGTGTATCCACAGTGTCCTAAGCAATCAGAAGTAGTAGAATGTGGTTATTACATGATGCGGTTTATGCTTGACATCATATTGTCAAAGAGTATTTCTATCATAGATATAGTAAGCATAACAGTTTTAAAACTATTGTGCATGTATAATTTATTATGAATGAAACTCAATTACAATCACTTTATTGTCTATAGATGAAAGATTCACGTCGTACTTACACACAGAATGACATTGATTGTATAAGGTCAAAGTGGGCAGAGTTTGTAGGGAAACATGTGTATTGTACTTAGGATAAGATCGTTGATTAACTTTTTGAAATATTTTGTCACATATTTTTGTGGATATAAATGTTTTTCCGATTAAGGTATAAACGAACCCCATAGGTACCACAAAAGATGTTTTTTTGAAGCTTATCAATGAGGTAAGATTATCTTAGAGGTTAGTAAAATGCAATTTTTGAAGCTGATCTGATTATATACGTGCATATGTTGCTGGTCTTCTATTGAAATGGAGACTAAAGAATTCTCTGTATGTGCTATGTTGTGTATGTGTTGTGTTGGATGGTGAATGTTTTTTATGTGTTGTGTATGTGTTGTGTTCTTGCTCTGTCTAGTATTTGGTTCTCTCTTATCTAGTCTATTGGCATCATATGTATCAAGTTTTGGTTGATCTTATATACATTCATTCGAGCAAATCCATTAAAGAAAGATATATTAACATATGAGTGATGGAATGCATCAATAAAAAAATATTCCTTATCTAATTTATGTTTCTCTCTTTATAGAACAGAGAAAATGTGTATTCTTATCTATACAAAATTAGAATTGCCCTTTATCATAGTTGATAGAAGCTTATATTGCAGCTCCTACTACAATCATCATTAAATGTGTATGTGCTATGTTGTGTATGTGCTGTGTTGTTGAAGTGAATGTGCAGTGTATGTCAATCTATGTATATTCTTATCTTGATGTGTAGAGTCATACTCTAAAATTGCATTTTCTTTTCTTACTAGGTTTTGGAAGAATCCATTGGGGTAGTGAAGTCATATTTTCGACAATTGATTGATTTATAGGCCTTTTTGTAGGTTTGGTAGCAAAATTTTGGTTCAAATGTACTTATGTAAATAGCTTGTTGGTACCAAAACATGTATGTTCATTCCTTCATTGTATAAACCTTTTACCAACAATTGTACATATATTATATATTAAAGCGTTCAAGGTGTCTTTCCATATGAGTGTGTTGT

mRNA sequence

ATGAGAAGTGAGAGGAAGAAACAAAAATGTAATTCGAGTGTCAGGCCCTCATTTGTGGTCGTTCGACATAATGAAGAAGACAAAACAAAATTGGAGGGTGTGAAGTGTCCTAAGCAATCAGAAGTAGTAGAATGTGGTTATTACATGATGCGGTTTATGCTTGACATCATATTGTCAAAGAGTATTTCTATCATAGATATAATGAAAGATTCACGTCGTACTTACACACAGAATGACATTGATTGTATAAGGTCAAAGTGGGCAGAGTTTGTAGGGAAACATGTTTTGGAAGAATCCATTGGGGTAGTGAAGTCATATTTTCGACAATTGATTGATTTATAGGCCTTTTTGTAGGTTTGGTAGCAAAATTTTGGTTCAAATGTACTTATGTAAATAGCTTGTTGGTACCAAAACATGTATGTTCATTCCTTCATTGTATAAACCTTTTACCAACAATTGTACATATATTATATATTAAAGCGTTCAAGGTGTCTTTCCATATGAGTGTGTTGT

Coding sequence (CDS)

ATGAGAAGTGAGAGGAAGAAACAAAAATGTAATTCGAGTGTCAGGCCCTCATTTGTGGTCGTTCGACATAATGAAGAAGACAAAACAAAATTGGAGGGTGTGAAGTGTCCTAAGCAATCAGAAGTAGTAGAATGTGGTTATTACATGATGCGGTTTATGCTTGACATCATATTGTCAAAGAGTATTTCTATCATAGATATAATGAAAGATTCACGTCGTACTTACACACAGAATGACATTGATTGTATAAGGTCAAAGTGGGCAGAGTTTGTAGGGAAACATGTTTTGGAAGAATCCATTGGGGTAGTGAAGTCATATTTTCGACAATTGATTGATTTATAG

Protein sequence

MRSERKKQKCNSSVRPSFVVVRHNEEDKTKLEGVKCPKQSEVVECGYYMMRFMLDIILSKSISIIDIMKDSRRTYTQNDIDCIRSKWAEFVGKHVLEESIGVVKSYFRQLIDL
Homology
[Close]
BLAST of MELO3C033279.2 vs. NCBI nr
Match: XP_022156946.1 (uncharacterized protein LOC111023778 [Momordica charantia])

HSP 1 Score: 70.1 bits (170), Expect = 5.5e-09
Identity = 30/62 (48.39%), Postives = 44/62 (70.97%), Query Frame = 0 

Query: 34  VKCPKQSEVVECGYYMMRFMLDIILSKSISIIDIMKDSRRTYTQNDIDCIRSKWAEFVGK 93
           VKCP+Q    ECGYY+M+FM  I+  +S SI D+MK   + YT++DI+ +R +W EFVG 
Sbjct: 53  VKCPRQPGSTECGYYVMQFMRAIVNQQSTSITDVMKLEPKEYTKDDINVLRMEWVEFVGS 112

Query: 94  HV 96
           ++
Sbjct: 113 YL 114

[Close]
BLAST of MELO3C033279.2 vs. NCBI nr
Match: PRQ21563.1 (putative Ulp1 protease family catalytic domain-containing protein [Rosa chinensis])

HSP 1 Score: 67.8 bits (164), Expect = 2.7e-08
Identity = 33/71 (46.48%), Postives = 49/71 (69.01%), Query Frame = 0 

Query: 28  KTKLEGVKCPKQSEVVECGYYMMRFMLDIILSKSISIIDIMKDSRRTYTQNDIDCIRSKW 87
           K   E VKCP+Q   VECGYY+M++M +II + S SI++ M + + TYTQ +ID +R +W
Sbjct: 525 KVHWEVVKCPRQPGSVECGYYVMKYMKEIIGTPSSSILN-MFEGKETYTQEEIDVVRVEW 584

Query: 88  AEFVGKHVLEE 99
           AE V  ++ +E
Sbjct: 585 AEQVDGYIQDE 594

[Close]
BLAST of MELO3C033279.2 vs. NCBI nr
Match: PRQ44716.1 (putative Ulp1 protease family catalytic domain-containing protein [Rosa chinensis])

HSP 1 Score: 67.8 bits (164), Expect = 2.7e-08
Identity = 33/71 (46.48%), Postives = 49/71 (69.01%), Query Frame = 0 

Query: 28  KTKLEGVKCPKQSEVVECGYYMMRFMLDIILSKSISIIDIMKDSRRTYTQNDIDCIRSKW 87
           K   E VKCP+Q   VECGYY+M++M +II + S SI++ M + + TYTQ +ID +R +W
Sbjct: 414 KVHWEVVKCPRQPGSVECGYYVMKYMKEIIGTPSSSILN-MFEGKETYTQEEIDVVRVEW 473

Query: 88  AEFVGKHVLEE 99
           AE V  ++ +E
Sbjct: 474 AEQVDGYIQDE 483

[Close]
BLAST of MELO3C033279.2 vs. NCBI nr
Match: XP_024186978.1 (uncharacterized protein LOC112191799 [Rosa chinensis])

HSP 1 Score: 67.8 bits (164), Expect = 2.7e-08
Identity = 33/71 (46.48%), Postives = 49/71 (69.01%), Query Frame = 0 

Query: 28  KTKLEGVKCPKQSEVVECGYYMMRFMLDIILSKSISIIDIMKDSRRTYTQNDIDCIRSKW 87
           K   E VKCP+Q   VECGYY+M++M +II + S SI++ M + + TYTQ +ID +R +W
Sbjct: 112 KVHWEVVKCPRQPGSVECGYYVMKYMKEIIGTPSSSILN-MFEGKETYTQEEIDVVRVEW 171

Query: 88  AEFVGKHVLEE 99
           AE V  ++ +E
Sbjct: 172 AEQVDGYIQDE 181

[Close]
BLAST of MELO3C033279.2 vs. NCBI nr
Match: PRQ36356.1 (putative Ulp1 protease family catalytic domain-containing protein [Rosa chinensis])

HSP 1 Score: 66.6 bits (161), Expect = 6.1e-08
Identity = 32/67 (47.76%), Postives = 48/67 (71.64%), Query Frame = 0 

Query: 32  EGVKCPKQSEVVECGYYMMRFMLDIILSKSISIIDIMKDSRRTYTQNDIDCIRSKWAEFV 91
           E VKCP+Q   VECGYY+M++M +II + S SI++ M + + TYTQ +ID +R +WAE V
Sbjct: 529 EVVKCPRQPGSVECGYYVMKYMKEIIGTPSSSILN-MFEGKETYTQEEIDVVRIEWAEQV 588

Query: 92  GKHVLEE 99
             ++ +E
Sbjct: 589 DGYIEDE 594

[Close]
BLAST of MELO3C033279.2 vs. TrEMBL
Match: tr|A0A2P6PI11|A0A2P6PI11_ROSCH (Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0240601 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.8e-08
Identity = 33/71 (46.48%), Postives = 49/71 (69.01%), Query Frame = 0 

Query: 28  KTKLEGVKCPKQSEVVECGYYMMRFMLDIILSKSISIIDIMKDSRRTYTQNDIDCIRSKW 87
           K   E VKCP+Q   VECGYY+M++M +II + S SI++ M + + TYTQ +ID +R +W
Sbjct: 525 KVHWEVVKCPRQPGSVECGYYVMKYMKEIIGTPSSSILN-MFEGKETYTQEEIDVVRVEW 584

Query: 88  AEFVGKHVLEE 99
           AE V  ++ +E
Sbjct: 585 AEQVDGYIQDE 594

[Close]
BLAST of MELO3C033279.2 vs. TrEMBL
Match: tr|A0A2P6RE63|A0A2P6RE63_ROSCH (Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0482291 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.8e-08
Identity = 33/71 (46.48%), Postives = 49/71 (69.01%), Query Frame = 0 

Query: 28  KTKLEGVKCPKQSEVVECGYYMMRFMLDIILSKSISIIDIMKDSRRTYTQNDIDCIRSKW 87
           K   E VKCP+Q   VECGYY+M++M +II + S SI++ M + + TYTQ +ID +R +W
Sbjct: 414 KVHWEVVKCPRQPGSVECGYYVMKYMKEIIGTPSSSILN-MFEGKETYTQEEIDVVRVEW 473

Query: 88  AEFVGKHVLEE 99
           AE V  ++ +E
Sbjct: 474 AEQVDGYIQDE 483

[Close]
BLAST of MELO3C033279.2 vs. TrEMBL
Match: tr|A0A2P6QQA8|A0A2P6QQA8_ROSCH (Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0390571 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.0e-08
Identity = 32/67 (47.76%), Postives = 48/67 (71.64%), Query Frame = 0 

Query: 32  EGVKCPKQSEVVECGYYMMRFMLDIILSKSISIIDIMKDSRRTYTQNDIDCIRSKWAEFV 91
           E VKCP+Q   VECGYY+M++M +II + S SI++ M + + TYTQ +ID +R +WAE V
Sbjct: 529 EVVKCPRQPGSVECGYYVMKYMKEIIGTPSSSILN-MFEGKETYTQEEIDVVRIEWAEQV 588

Query: 92  GKHVLEE 99
             ++ +E
Sbjct: 589 DGYIEDE 594

[Close]
BLAST of MELO3C033279.2 vs. TrEMBL
Match: tr|A0A2P6S839|A0A2P6S839_ROSCH (Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0318241 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.0e-08
Identity = 32/68 (47.06%), Postives = 48/68 (70.59%), Query Frame = 0 

Query: 28  KTKLEGVKCPKQSEVVECGYYMMRFMLDIILSKSISIIDIMKDSRRTYTQNDIDCIRSKW 87
           K   E VKCP+Q  +VECGYY+M++M +II + S SI++ M + + TYTQ +ID +R +W
Sbjct: 171 KVHWEVVKCPRQPGLVECGYYVMKYMKEIIGTPSRSILN-MFEEKETYTQEEIDVVRVEW 230

Query: 88  AEFVGKHV 96
           AE V  ++
Sbjct: 231 AEQVDGYI 237

[Close]
BLAST of MELO3C033279.2 vs. TrEMBL
Match: tr|M5X8K1|M5X8K1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G113900 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.2e-05
Identity = 28/63 (44.44%), Postives = 39/63 (61.90%), Query Frame = 0 

Query: 35  KCPKQSEVVECGYYMMRFMLDIILSKSISIIDIMKDSRR--TYTQNDIDCIRSKWAEFVG 94
           + PKQ   VECGYY+MRFM DII+  S++        ++   Y Q  ID +R++WAEFV 
Sbjct: 279 RTPKQPSSVECGYYVMRFMRDIIMDPSLAFEKKYAKGKQEAPYPQEAIDEVRNEWAEFVC 338

Query: 95  KHV 96
            H+
Sbjct: 339 LHI 341

The following BLAST results are available for this feature:
BLAST of MELO3C033279.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022156946.15.5e-0948.39uncharacterized protein LOC111023778 [Momordica charantia][more]
PRQ21563.12.7e-0846.48putative Ulp1 protease family catalytic domain-containing protein [Rosa chinensi... [more]
PRQ44716.12.7e-0846.48putative Ulp1 protease family catalytic domain-containing protein [Rosa chinensi... [more]
XP_024186978.12.7e-0846.48uncharacterized protein LOC112191799 [Rosa chinensis][more]
PRQ36356.16.1e-0847.76putative Ulp1 protease family catalytic domain-containing protein [Rosa chinensi... [more]
BLAST of MELO3C033279.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C033279.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C033279.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2P6PI11|A0A2P6PI11_ROSCH1.8e-0846.48Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinen... [more]
tr|A0A2P6RE63|A0A2P6RE63_ROSCH1.8e-0846.48Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinen... [more]
tr|A0A2P6QQA8|A0A2P6QQA8_ROSCH4.0e-0847.76Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinen... [more]
tr|A0A2P6S839|A0A2P6S839_ROSCH4.0e-0847.06Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinen... [more]
tr|M5X8K1|M5X8K1_PRUPE4.2e-0544.44Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G113900 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain_like_cys_pep_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0008233 peptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033279.2.1MELO3C033279.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILYSSF54001Cysteine proteinasescoord: 27..94

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C033279.2Cucumber (Gy14) v2cgybmedB281
MELO3C033279.2Cucumber (Gy14) v1cgymedB605
MELO3C033279.2Cucurbita maxima (Rimu)cmamedB708
MELO3C033279.2Cucurbita moschata (Rifu)cmomedB699
MELO3C033279.2Cucurbita pepo (Zucchini)cpemedB085
MELO3C033279.2Wild cucumber (PI 183967)cpimedB315
MELO3C033279.2Cucumber (Chinese Long) v2cumedB313
MELO3C033279.2Bottle gourd (USVL1VR-Ls)lsimedB166
MELO3C033279.2Watermelon (Charleston Gray)medwcgB530
MELO3C033279.2Silver-seed gourdcarmedB0200
MELO3C033279.2Cucumber (Chinese Long) v3cucmedB322
MELO3C033279.2Watermelon (97103) v2medwmbB535
MELO3C033279.2Wax gourdmedwgoB649